Phascolarctos cinereus (koala): 110200228
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Entry
110200228 CDS
T05867
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110200228 (HFM1)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110200228 (HFM1)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110200228 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
110200228
NCBI-ProteinID:
XP_020831123
UniProt:
A0A6P5JCL8
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MYSPEGRAFPFSSEDGTATRPKTSPFSTMFNSDDCPFSLNSLFFVRPDETDKYADDKMSS
CWFLPPAPLISEIPDTQVLQEELETFKTLEQTKNKEMFTSHLKIPNEATNCISPTHEFQF
DFYSNKSRETKLNLGMTDKDYLPAGPSKLSYGSVHQYQNHIGPVEPTESIVSGDRIFLDS
SEEDKSETIPSTFRKRLFKTSNCSYRNAGCSGGPALDFRIDPVDNLKTKMNKGELWKNTV
SKQKPPYLDVNLFTTKDALFASDVEESIFRAQNLTNASESFGIQGTAEKDFCSLKSVTEI
PAQFRSIFKEFPYFNYIQSKALDDLLYTDRNFVVCAPTGSGKTVIFELAITRLLMEVPLP
WLNIKIVYMAPIKALCSQRFDDWQKKFGPVGLTCKELTGDTAMDDLFEIQRAHILMTTPE
KWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTMSSLSQIPEHSNA
AMLVRFVAVSATIPNVEDIAEWLSDGKRPAKCLKIDENHRPVKLHKVVLGFPWSGNQNEF
KFDLSLNYKVASVIQTYSNQKPTLVFCATRKGVQQAASVLSKNAKFVMTVEQKQRLQNYT
HSIRDSKLRDLLTCGIGYHHAGMEISERKIVEGAFTVGDLPVLFTTSTLAMGVNLPAHLV
VIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLTGTDT
IESSLHKHLIEHLNAEIVLHTITDVSVALEWIRSTLLYIRALKNPAHYDFPSGMDKNGIE
SKLQELCLKNLNDLSSVNLIKMDEDVNFKSTEAGRLMAWYYITFETVKKFCTTKGTETLS
ELVTMIASCKEFLDIQLRINEKKTLNTLNKDQSKITIRFPMEGRIKTREMKVNCSIQAHL
GCLPLQDFALTQDTAKIFRSGTRITKWLSEFLAAQEKKFAVLLNSLILAKCFRAKLWENS
LHVSKQLEKIGVTLSNAMVNAGLTSFKKIEDINARELELILNRHPPFGNQIKETVIHLPK
YELEVEQISRYSNMVAEILVTVFLRNFEQLQTKRTAPDSHYVTLIVGDADNQVVFKYKLM
DSVLLKTGNWTKKIDVKRALQSEELSINLISSEYVGLDIQEKFTAFYLGPNRLENQMVMQ
RNLETETHSRHSHGSPSTGSICSRKNTCKISGNRDCHHHCKNKDTCGHDCCKIGVAQKSE
MRESTFSSYLTDLRHRDAISSVPPVKRLKMQINKSQNVDLKKFRFTPRASLPVSPRSKCT
QISASSLVKKRDSPEICEKSQQQLQSAYYGGKDFSTWKCCPTLNEESPHRVLSNRNLNSS
LMHNLTDADKNSSRFSDSLNVNFELGDEVWDDFNDEKLIHASNFLTHMENTKTPGNPLLP
SALGRGPPLGKTQDRFQRGTSNRLCLSSESPDVHLQDSIISKFHMSCKVPQQPGNTNTFH
FQEGQHQNLSPEIERVRPTVWLEKESSTSHSNKKWDFFVSSNDSKKVADLSAHQSDEEDE
MKAFLGIFDGIF
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtccagagggacgagcattcccttttagttcagaggacgggacagcgaccaga
ccgaagaccagcccattttcaacaatgtttaactcagatgattgccctttttcattgaat
agtttgttttttgtgagaccagatgaaactgacaagtatgctgatgataaaatgtcatct
tgttggtttctcccacctgctcccttgatttctgaaattccagatactcaagtgttacaa
gaagaattagaaacatttaaaacattagaacaaacaaagaataaggaaatgtttacctca
catttgaagatacctaatgaagctacaaactgtatatcaccaacacatgaattccagttt
gatttttactccaacaaaagcagagaaacgaagctaaacttaggaatgacagataaggac
tatttgccagctggtccttccaagctgagttacggttctgtacatcagtaccaaaatcac
attgggcctgtagagccaactgaaagtattgtttcaggtgacagaatattccttgactcc
tcagaagaggataaaagtgagactattccttcaacattccgaaaaagattatttaaaaca
tctaactgttcatatagaaatgcaggttgcagtggtggtcctgctttggattttcgtatt
gacccagtggacaaccttaaaactaagatgaacaaaggggaattatggaagaatactgtt
agtaagcagaagccaccatatttagatgttaacctctttactacaaaagatgcactcttt
gcttcagatgttgaagaatccattttcagagcacaaaatttaacaaatgcttcagagtct
tttggtatccaagggactgcagaaaaagatttctgttccttgaagtctgttacagaaatc
cctgcacaatttagaagcattttcaaagaatttccgtatttcaactatatacagtctaaa
gctttggatgatcttctttatacagataggaatttcgtagtttgtgctccaactggttct
gggaaaacagtaatatttgaacttgctataacaagattattaatggaagttccactaccc
tggttgaatattaaaattgtttacatggcaccaataaaagctttgtgtagtcagcgcttt
gatgactggcaaaaaaaatttggacccgtagggttgacttgtaaagaactaactggagat
acagccatggacgacctgtttgagattcagcgtgcccatattcttatgacgaccccagaa
aaatgggatagcatgactaggaaatggagagacaactctttggtccagttggtacgactg
ttcctcattgatgaggtacatgttgtgaaagatgaaaatcgtggtccaactcttgaagtt
gtggtcagtcggatgaaaactatgtcttctttatctcaaatcccagaacattccaatgct
gctatgctggtgagatttgtggctgtgtctgcaacaattccaaatgtggaagatattgcc
gaatggctttcagatggcaagaggcctgctaagtgcttgaaaattgatgagaatcacagg
ccagtgaaactgcacaaagtcgtacttggatttccgtggagtggtaaccagaatgagttt
aagtttgatttatccctcaactacaaagttgccagtgtcatacagacctactccaatcag
aaaccgacacttgtgttttgtgccacaaggaaaggggtgcagcaagcagcttcagttctc
tcaaaaaatgctaagtttgtcatgacagtggaacagaaacaaaggttacaaaactataca
cattccataagagattccaaactgagagatctcttaacatgtggtattggttaccatcat
gctggtatggagatatcagagagaaaaattgttgagggagcatttacagttggagactta
ccagtcctttttactaccagtaccttagctatgggagtaaatttaccagcccatctagta
gttataaaatctacaatgcactatgctggaggaatgtttgaagaatacagtgaaacagat
attctgcaaatgattggtagggctggccgtcctcaattcgacactacggccactgcagtt
atcatgactaggttaagtacgagggagaagtacgtgcagatgctaactggcaccgatacc
atcgagagcagtttgcacaagcacctaattgagcatttaaatgcagaaatagtactgcat
accatcacagatgtcagtgtagctttggaatggatacgatcaaccttgctttacatcaga
gccttgaaaaatccagctcattatgattttccatctggaatggacaaaaatggaattgaa
tcaaaattacaagagttgtgtttgaagaatttgaatgatttatcttctgtcaacttgata
aagatggatgaagatgttaatttcaaatcaactgaggcaggaagattaatggcgtggtat
tatattacatttgagacagtgaagaaattttgtacaactaagggaacagaaactttatca
gagctggtcacaatgatagccagctgtaaagaatttctagatatacagttaagaataaat
gaaaagaaaacactgaacactctaaataaagaccaaagcaagataactatcaggtttcca
atggaaggaagaataaaaacaagagaaatgaaagtaaattgttctattcaggctcatctt
ggatgccttcctcttcaggactttgctttgacacaagacacagctaagatcttcagaagt
ggcacaagaatcacaaaatggttatcagagtttctggcagcacaagagaagaagtttgca
gtcctcttaaacagtttgattttagctaaatgctttcgggctaaactttgggaaaattct
ctgcatgtttccaaacagctggaaaaaattggtgtcacattgtccaatgcgatggtaaat
gcaggtctgacttcctttaagaaaatagaagatatcaatgccagagaacttgagctgatt
ttaaacagacatcccccttttggaaaccaaatcaaagaaaccgtgatacatctaccaaaa
tatgaacttgaagttgagcagatttcaagatacagtaacatggtagctgaaatcttagtg
accgtcttcctaagaaactttgagcagcttcagactaaaagaacagcaccagattctcac
tatgtgaccctgatagtgggagatgcagataaccaagtggtttttaaatataagcttatg
gattctgttctactgaaaactggaaattggactaaaaaaattgatgttaaaagagctctt
cagtctgaagaacttagcattaatctaattagttcagaatatgtgggacttgatattcaa
gagaagtttacagccttttacttaggacccaacagacttgaaaatcaaatggttatgcaa
agaaatttagaaacagagacacattcaagacattcacatggctctccaagtacaggaagc
atctgcagcagaaagaatacttgcaaaatatctggaaacagagactgccaccatcactgt
aaaaataaagatacgtgtggacatgattgctgtaaaattggagttgcacaaaagtcagaa
atgagagagtcaacattttcttcctatctaactgatttaagacacagagatgcaatttca
tctgttcccccagttaaacgcctcaagatgcagataaataaatctcaaaatgtggatctt
aagaaatttcgatttactccaagggcttcgcttccagtttctccaaggtcgaagtgtaca
caaatttctgcatcctccttagtgaaaaaaagggattctcctgaaatctgtgaaaaatct
cagcaacagctgcaatcagcttattatggaggaaaggatttttccacatggaaatgttgt
cctactttaaatgaagaaagcccgcacagagtactctccaacagaaatcttaatagttcc
ctaatgcataatttgacggatgcagataaaaatagctctcggttttcagactctttgaat
gtgaactttgaattgggagatgaagtttgggatgatttcaatgatgaaaaattaatacat
gcgagtaacttcttaacccacatggagaacaccaaaactccaggaaaccctttgcttccc
agtgccttgggacgtgggccacctctcggaaagacacaggacagattccaaaggggaact
tcaaatagattgtgcctgtcatctgagagcccagatgttcatttacaagattccatcatt
tcaaagtttcatatgtcctgcaaagtgcctcaacagcctggaaacacaaatacttttcat
tttcaagaaggacaacatcagaatctttcaccagaaatagagcgagtgcgacctactgtt
tggttggagaaagaatcaagtacttctcattccaataagaaatgggatttttttgttagt
agcaatgatagcaaaaaagtagctgatctcagtgcacatcaatctgatgaagaggacgaa
atgaaggcttttcttgggatatttgatgggattttctaa
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integrated database retrieval system
