Phascolarctos cinereus (koala): 110200516
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Entry
110200516 CDS
T05867
Symbol
DCHS1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-16
KO
K16507
protocadherin-16/23
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
110200516 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcw04515
]
110200516 (DCHS1)
Cell adhesion molecules [BR:
pcw04515
]
Cadherins
Cadherin related
110200516 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110200516
NCBI-ProteinID:
XP_020831555
UniProt:
A0A6P5JBM6
LinkDB
All DBs
Position
Unknown
AA seq
3314 aa
AA seq
DB search
MELESEQEAELGAPHPSVGPRSPRPFPLLPLLLLLLGAQAPGARGQAGSLDLQIDEEQPA
GTLIGDISAGLPVDTATPHMYFISAQEGSGVGTDLAIDEQSGVVRTARVLDRERRDHYQF
TAVTPDGATVEVTVRVADINDHAPAFPKARASLQVPEHTAPGTHYPLEPAHDADAGHLGT
QGYALSGEGAGQAFRLETRPGPDGSPVPELVVSGELDRENRSHYTLRLEAYDGGAPPRRA
QALLDVTLVDINDHAPAFNQSRYRAVVSESLPPGSPVLQVFAADADAGANGAVTYEINRR
QSDGDGPFSIDARTGLLRLERPLDFEQRRVHELVVQARDGGAHPEVGSAFVTVHVRDSND
NQPTMTIIFLSEDGSPRVSEGAQPGQLVARISVSDPDDGDYAHVNVSLEGGDGKFALTTQ
DSVIYLVCVARRLDREEQDAYELRVTATDAGTPPLRAEAAFVLHVTDVNDNAPAFDRLLY
QPEPLPEVVLPGSFVARVTAHDPDQGPNGNVAYSIMPGTHAHWFAIDAVTGVITTAAPLD
YELEPRPQLTVLASDGGQPALSSTAVVNVVLQDVNDNEPVFKRTFYNASLPEGTAPGTCF
LQVTATDADSGPFGLLSYSLGAGLSSIGTPPFQIDPLTGEVCTSRSLDRDQGPPSFDFTV
TAVDGGGLKSLVYVKVFVSDENDNRPEFYPRTYAASVSTQSPPGTAVLRVSAHDPDQGPH
GTLTYRILAGNNPPLFALDKDSGIVSVAWPLTGRSDSVQQLEIGVQDAGGLRAEPNAQVN
ISIISGPLALPVFEQAQYVFSVLEDVPPGTSVGTIRAHHPPGRPGSVALTLSGGDPQGLF
SLDGASGLLRTRRLLDRERLGPVLELEVRAGVGSPPAFALARVRVLLDDVNDNAPAFPSP
TDTVWLPPDASPGTPVYTLRASDPDTGTNGHVTFTLVAGGKGTFAVDPTTGHVQLXGPLG
GLAHELELEARDGGSPPLTGRFLLRVAIQEAGSRAGMGPDTGAGGGIPKFDNPTYHVELS
ESTAPGTKFLQVRAQGPKGGPPISYHLQSDGVGTTFGVESRSGWLWVRTALDREAWEAYT
LPVLAVAGDGQGSVTGTATVRVSIRDRNDHGPRLTEEPTFLAVAENQPPGTTAGRITATD
RDSGPNGHLTYHLLQPPDESGAFHIHPQTGEVTTRRNLDREQQSSYQLLVQVQDGGAPPR
STTGTVHIMVLDLNDNSPTFLHTLGAAGGGFPVQVLEGIPPGTLVTRLQAKDPDEGENGT
ILYSMTGPGSELFLLHPHSGELSTAGPLSRLERPHYVLTVNAQDQGSPPRSTSLQLLLQV
LPRTRSPVAPDASAAPAVLTLTAGEGLQPGSLLGSVALPGAPQGVLTYTLVGGGDPEGTF
ALDAATGQLYLARPLDFEAGPAWRALTVRAEEVGGGAPVYPAGPRLLRVELRVEDENEHA
PTFSRDPLTLALPENPPPGAAIYTFQAADADGPGPNSDVRYRLLRQSPPVPALRLDPRTG
ALSAPRGLDREATPALLLLVEATDQARNISLRRSTRVSARVFVTDENDNVPVFVSPPTTL
LPEDQPTSSVALYVVARDPDLGEAARLSYQLAGGNSDGHFHLHPSTGALSITRPLDREQR
AEYVLTVVASDHGSPPRSATQLLTVSVVDINDEAPTFPQAAYHVHVPENRPPGTTVLTLH
ATDPDLGTEWQVTYGGVSGDTFTLDPDTGVLTTRQVLDREEQQEIHLTVYAQDGGSPPLL
SHVSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQTLTVLRASDPDVGPNGQINYQILNG
DPSGAFILDAVLGTLGTARSLDRETEPSFQLLVAARDGGQPALSATMLVTVVVLDANDHA
PTFTAPSYAVEVPEDAPTGTLLLQLEARDPDAGANGRVAYYLGEGAAGAFLLEPASGELR
TAVPLDREQQARYGFVVHAVDGAAAGPLSASVSVTVTVRDVNDHAPAFPASPLRLRLRPT
RTALGQGSSGPHILATLRAEDRDAGANASILYRLAGPAPPGASVDSYTGEIRLARPPAAL
GPRDRVLFIVATDLGRPARSATGVVIVGLHGETERGPRFPRPSSEAVIPEDAPPGTLIVS
PQATHAGGSTGAITYSILSGNEHDLFSIEPSTGALSVKAAGGLDFETSPRLRLVLQAESG
GSFGFTVLTLSLQDANDNAPRFLKPHYAAFVPESRPLSGPLLKVEADDLDQGPGGQVTYS
LAPSQATRGLFHIDPAVGTITTTAILDREIWAETRLVVMATDRGSPPLVGSATLTVLVID
ANDNRPTIPQPWEIQVPEDALLGSEIARVTGNDVDSGPALWYVLNPPGNQGPFSVGRYGG
RISLTEPLDFEHMDCYQLHLLARDGQHEGSANLTVQVEDVNDNAPTFSQSLYQVTLPERI
IPGSAILTISATDLDSGENGRISYHLVSTAEGFDIDPSNGTLFIIQAASLSPGGLSTMDV
VLEARDHGVPERTAQATVHIQLQDENDYTPSFVQPHYHITVAEDMPPGSTVLVLEATDAD
QSRLHATLDYTIISGNRGHAFQLERHLEEGGSGPQALGCLVLLEPLDFESVTEYNLTVCA
ADRGKPPRSTTVLVVITVQDVNDNPPVFAQPHYHVAVPEDTPVGTELLHVAASDADPGPH
GLVHFTISSGDPAHLFELDESSGALRLARQLDREAQAQHQLVVEAADPSGAHFALVPVTV
EVQDVNEHGPAFPLLTLSASLPENQPPGTLVTTLHALDKDTGAFGRLHYMLLEPGLGSGL
GATHWDMFALNGSSGELRARVPFDYEHTRSFQLLVGAADAGNLSASVTLSVLVTGEDEYD
PVFLAPSFHFQVPEGARRGYSLGHVLATDEDGGADGVILYSLSAPSPYFGINQTTGALYL
RVDSQAPGTGASKAGGGGRARREAPRELQLEVVARGPLPGARSAAVPVTVDITHTALGLA
PDLNVLLVGAVAASLGVVVVLALAALVLGLVRARAHKAEAAPGPTLPPAPLSTSSLQKPG
RDAPSPPHSEHLYHQTLPGYGGPSTGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEF
PRVASVASSLAARGPDSGIQQDADADGLSDTSCEPPPPDAWYKGRKAGLLLPGPGPGLYR
EEGPPAASTAGAFLGGCGLSPAPPGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYL
LSWCPQFQPLASVFTEIARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASSSSG
PGVRGPFLPAHRSPISHEGSLSSTAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSA
EPGLEAPDEAELHI
NT seq
9945 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagtcagagcaggaggctgagctgggtgctccccacccctcagtgggccca
agatccccccggcccttcccactgctgccgctgctgctgctgcttctgggggcgcaggca
cctggggcacggggccaggcaggcagcctggacctgcagattgatgaggagcagccagcc
ggcacgctgataggggacatcagcgcagggctgcctgtggacacagcaactccccacatg
tacttcatctctgcccaagagggcagtggtgtgggcacagacctagccatagatgagcag
agtggtgtggtgcggactgcccgagttctggaccgagaacgccgagaccactaccaattc
actgcagtcacgccagatggtgccactgtggaggtcacagtacgtgttgctgacatcaat
gaccatgcacctgccttcccaaaggctcgtgccagccttcaggtgccagagcacacagcc
cctggcactcattatccccttgagcctgcccatgatgctgatgctggtcatctgggtacc
cagggctatgcgctatctggagaaggggctggccaggccttccgactggaaacacgtcct
ggccctgatggctcccctgtgcctgagctggtggtcagtggggagctggaccgcgagaac
cgctcacattatacgctgcggctagaagcttatgatggcggggcaccccctaggcgggcc
caagccctgctagatgtgacactggtggacatcaatgaccatgcccctgccttcaaccag
agccgataccgggcggtggtgtctgaaagcctaccccctggcagcccggttctacaggta
ttcgctgctgatgctgatgccggggccaatggagctgtgacctatgaaatcaatcgacgg
cagagtgatggcgatggccccttctcgatcgatgcccgcacagggctgctgcgacttgag
cggccactagactttgagcagcgacgtgtgcatgagctggtggtacaggcccgtgatgga
ggtgctcatcctgaagtgggctcagcttttgtcaccgtgcatgtgcgtgactccaatgac
aatcagcccaccatgaccatcatcttccttagtgaggatggttcccctcgtgtgtctgag
ggtgcgcagccagggcagctggtagctcgaatctctgtgtctgacccagatgatggtgat
tatgcacatgtcaatgtatccctggagggtggtgacgggaagtttgccctgaccacccag
gacagtgttatctacctggtgtgcgtggctcggcggctcgaccgagaagaacaagatgcc
tatgaacttcgggtcactgctactgatgctgggacccctccgctgcgtgcagaggcggcc
tttgtccttcatgtcacagatgtcaatgacaatgcaccagcctttgatcgcctgctctac
cagcctgagcctctccctgaggttgtgctccccggaagctttgtggcccgggtcactgcc
catgaccctgaccagggccccaatggcaacgtggcctatagcattatgcccggaacccat
gcccattggtttgctattgatgcagttacaggagtaattaccacagctgccccactggac
tatgagcttgagccacggccacagctaacggtgctggcctctgatggaggacagcctgca
ttgtcttccacagctgtggtcaacgtggttctgcaagatgtgaacgacaatgaacctgtg
ttcaagaggaccttctacaatgcctccctgcctgagggcacagcccccggcacctgcttc
ctacaggtgacagctacagatgcagacagcggcccctttggcctcctttcctactctttg
ggagctgggcttagctccataggcacaccccccttccaaattgaccccctcactggagag
gtatgcacatcccgaagcctggaccgtgatcaaggaccccccagcttcgacttcactgtc
actgctgtggatgggggtggcttgaagtcacttgtttatgtaaaggtgtttgtgtcagat
gagaatgacaaccggcctgagttctacccaaggacatatgcagccagtgtaagcacccag
agcccaccaggcacggctgtactgagggtcagtgcacatgaccctgaccagggtccccat
ggcaccctcacctaccgcatcctggctggtaacaaccccccactctttgccctggacaag
gactcagggatagtgtctgtggcctggccccttactggacggtctgactctgtgcagcag
ctggagattggggtccaggatgctggcggccttcgagctgagcccaatgcccaggtcaac
atcagcatcatctctgggcctcttgcacttccagtctttgagcaagcacagtatgtcttc
tctgtgcttgaggatgtgcctccaggaaccagtgtgggcaccatacgggcacaccacccc
ccaggccgcccaggctctgtggccctcacactctctgggggagatccacagggcctcttc
tcattggatggggcatcgggactgctgcggacacggcgtctgctggacagggagcgcctg
gggccagtgctagagctggaggtgcgtgcaggcgtggggtctcccccagcctttgccctg
gcccgggttcgtgtgttgctggatgatgtgaatgataatgcacctgccttcccttcacca
acggatactgtgtggctgcccccagatgccagtccaggcacacctgtgtatacactgcgg
gcatctgatcctgacactggtaccaatggccatgtcacctttacactggtggctgggggt
aaaggcacctttgccgtggaccctaccacaggccacgtgcaactgngtgggcccctgggt
gggctggcccatgagctagagctggaagcacgtgatggtggctcgccccccctgaccggt
cgcttcctgcttcgagtagccattcaggaggcagggtccagggctggtatggggcctgac
actggggctggaggtgggatccccaagtttgacaaccccacttaccatgtggagctatct
gaaagtacagccccaggcacaaagttcctgcaggtgcgggcacagggccctaagggaggg
ccccctatatcctaccacctacagtcagatggggtgggtacaacctttggtgtggagtca
cgtagtggatggctttgggtgcgtacagcactggaccgtgaggcctgggaagcatacaca
ttgccagtcctggctgtggctggggatggtcaagggagtgtgacgggcacagccactgtg
agggtgagcatccgagacaggaatgaccatgggccccgtctcactgaagagcccaccttc
ctggctgtggctgagaaccagccaccgggaaccactgcaggccgcattacagccactgat
cgagactcgggccccaatgggcacctcacctaccacctgctgcagccaccagatgagagt
ggggcctttcatatccatccacagacaggggaagtgaccacacgacgcaacctggatcgt
gagcagcagagcagctaccagctcctggtacaagtgcaagatggaggtgctcctccccga
agcaccacaggcacagtgcacatcatggtgctggacctcaatgacaacagcccaaccttc
ctgcataccctgggggcagctggtggcgggtttccagtgcaggtgttggaaggcatccct
cctggaacccttgtcacacgcctacaggcaaaggacccagatgaaggagaaaacggaaca
atcctgtacagcatgacgggccctggctcagaactattcctgctacaccctcactctgga
gagctgagcacagctgggcccctgagtcgattggaaaggccccactatgtgctaacagtg
aatgctcaggaccagggcagccccccaagaagcaccagcctccagctgctcctgcaggtg
ctgccccggaccagatccccagtagcccctgatgcctcggcagccccagcagtgctgacg
ctgacagcaggagaggggcttcagccaggctccctgctgggatcagtggcacttccaggg
gccccccaaggggtgcttacctacacgctggtgggtggaggtgaccctgagggcacattt
gcattggatgcagccacaggtcagctgtacctggccaggcccctggactttgaagcaggg
ccagcatggagagccctgactgtgagggctgaggaggtgggtgggggtgctccagtttac
cctgctgggcctcggttgctgcgtgtggagcttcgtgtggaggatgagaatgagcatgca
cccaccttttcccgtgacccactaactctggcactgcctgagaacccgcccccaggagct
gctatctacacattccaagctgcagacgcagatgggcccggcccaaacagtgatgtacgc
taccgcctgctgcgccagtccccccctgtccctgccttgagactagatcctcgcactggt
gctctcagtgcccccagaggcctagatcgtgaggccacacctgccctgcttttgctggtg
gaggccaccgatcaggcccgcaacatcagcctgcgccgcagcactcgcgtctcggctagg
gtgtttgtgacagatgaaaatgacaatgtgccagtctttgtctcacctcctaccaccctg
cttcctgaggaccagcccactagttctgtggcactctatgtggtggcccgtgatccagac
ctgggtgaggctgcccgcctttcctaccaactggcaggtggcaacagtgatgggcacttt
cacttgcatcccagcactggtgcactgtctatcacacgacccctagaccgggagcagcga
gctgaatatgtgctgaccgtcgttgcttcagaccatggttcccctccccgatcagccact
cagttgctgacagtcagtgtggttgacatcaatgatgaggcccccaccttcccacaggca
gcataccatgtccatgtgcctgagaaccgtccaccaggcaccactgtgctcaccttgcat
gccaccgaccctgacttgggtacagaatggcaagtgacatatggtggtgtctctggtgac
accttcaccctggacccagacaccggggtcctcactactcgacaggtcctggaccgagaa
gagcagcaggagatccacctgactgtgtatgcccaagatgggggctcaccacctctgctg
agccatgtgtcagtacatgtgactgtggaggatgagaatgaccacgcaccagcctttggg
agctcccatctctccttggaggttcctgagggccaggatccccagacactgaccgtgctt
agggcttcagatcctgatgttggccctaatgggcagattaactatcaaatactgaatggt
gacccatcaggagccttcatcctagatgcagtgttgggaacactgggcacagcacgatcc
ctagaccgggagacagaaccatcattccagctattggtggcagccagggatggaggccag
cctgcattgagtgccacaatgctagtgactgtggtggtgctagatgccaatgatcatgca
cccaccttcacagcaccatcctatgcagtagaggtgcctgaggatgcacccacagggaca
ctgttgctgcagctggaggctcgtgatcctgatgctggtgccaatggacgtgtggcctac
tatttgggtgaaggtgcagctggtgccttcttgctagagcctgcctcaggagaactgcgc
acagctgttccactggaccgtgagcagcaggcccgctatggctttgtggtgcatgctgtg
gacggagccgcagctgggccactcagtgccagtgtgtctgtcaccgttactgtacgtgat
gttaatgaccatgcacctgccttcccagccagccccctaaggctccggttgcgccccaca
cgcacagccctgggccagggttcctctggtcctcacatattagccacattgagggctgag
gaccgtgatgctggtgccaatgcctcaatcttgtaccgactggcggggcctgcacctcct
ggtgcctcagtggactcatacactggtgagatccgcttggcacgtccaccagctgccctg
ggcccccgtgatcgtgtactcttcattgtggccactgacctgggccgcccagctcgttct
gccactggtgtggttattgtgggcttacacggggaaactgaacgtggcccccgatttccc
cggcccagcagtgaggctgttattcctgaggatgccccaccagggaccctcattgtgtcc
ccccaggccacccatgctgggggctccacaggcgcgatcacctacagcatcctcagtggc
aacgaacatgatcttttctccattgaacccagcacaggggcgctctcagtgaaagcagca
ggtggactggactttgagacaagcccaagactgcggctggttctgcaagcagagagtggt
ggttcctttggcttcacggtgctgacactaagcctacaggacgctaatgacaatgctcca
agatttctgaagccacactatgcagcctttgtacctgagtcccgacctttgtctgggcct
ctcctgaaggtcgaggctgatgacctggaccagggcccagggggacaagtcacttatagc
ctggctccatcccaggccacgagggggctgttccacatagacccagctgtgggtactatt
accaccacagccatcctggaccgagagatctgggcagagactcgcctggtggtgatggcc
acagacagaggttccccaccccttgtgggctcagccacgttgaccgtgctggtcattgat
gcaaacgacaatcggccaaccatcccccagccctgggagattcaagtgccagaggatgca
cttctaggctcagagatcgctcgggtaacggggaacgatgtggactcaggacctgccctg
tggtatgtgctgaacccgcctggaaaccagggccccttcagcgtaggacgctatggaggc
cgcatctcactcacagagccccttgactttgagcacatggactgttatcagctgcacctg
ctagcccgtgatgggcagcatgagggcagtgccaacctcacagtacaggtagaggatgtc
aacgacaatgcacccaccttctctcaaagcctctatcaggtgaccttgccagagcgcata
atcccaggcagtgcaatcctcaccatctctgccactgaccttgattctggggaaaacggc
cgcatctcctaccacctggtgtctactgcagagggctttgacatcgaccccagcaatgga
accttgttcataattcaagcagcctccctaagcccaggaggtttgagcacgatggacgtg
gtgctggaagcacgagatcatggggtcccagagcggacagcacaggccacagtacatatt
cagctacaagatgagaatgactatacccctagctttgtccagccccactaccacatcact
gttgctgaggacatgcccccaggctccacagttttagtgctagaagctacagatgctgac
caaagccgactccacgctacattggactatactatcatcagtggcaaccgtggccatgcc
ttccaattggaaaggcacttggaagaaggtgggtctggcccacaggccttgggctgtctt
gtgctgcttgagccactggactttgagagtgtcactgaatataacttgactgtgtgtgca
gcagatagagggaagcctccacgaagcacaactgtcctggttgtcatcactgtgcaagat
gtcaatgacaatccaccggtcttcgcccagccccattaccatgtggctgtgccagaggac
acccctgtgggcactgagttgttgcatgtagcagcctctgatgctgatcctggacctcat
ggtctggttcacttcaccatcagctctggggaccctgcacacctcttcgagctggatgaa
agctcaggtgccctccggctggcacgacagctagaccgagaagcccaagcacagcatcag
ctggtggttgaggcagctgaccccagtggagcccactttgcactggtgccagttactgtg
gaggtacaagatgtcaatgagcatgggcctgcctttcccctacttaccctgagtgccagc
ttacccgagaaccagcctccaggaacactggtcaccacactccatgccctggataaggac
actggggcttttgggcggctccactacatgctactagagccaggattagggtcaggactg
ggggccacacattgggacatgtttgcactgaatggttcatcaggtgaacttcgggcaagg
gtgcctttcgactatgagcatacccgtagcttccagttgcttgtgggagcagcagatgca
gggaacctctcagcctcagttaccctgtctgtgctagtaactggtgaagatgagtatgat
cctgtcttcctggcaccttcattccactttcaagtgcctgagggtgcccgtcggggctac
agtctcggccatgtactggccacagatgaggatggaggtgctgatggtgtgatcctatac
tctctttctgctccctccccatattttgggatcaaccagaccacaggtgctctgtacctt
cgagtggacagccaggcaccaggcacaggggccagcaaagccgggggagggggccgtgca
aggcgggaggcaccccgggagttacagcttgaggtggtggctcgagggcccttgcctgga
gcccgaagtgctgcagtgcctgtgactgtagacataacccacacagctctaggcttagca
cctgacctcaacgtgctgttagtgggtgctgtggcagcctcgctgggtgtggtggtggta
ctggcactagcagccttggtgttggggctggtgcgggctcgtgctcacaaggcagaggca
gccccagggcccactcttccacctgccccacttagcaccagctccctgcaaaaaccaggc
cgggatgcccccagccccccacattctgaacacctttaccaccagacactgcctggatat
ggtggtcctagcacaggcggtccttacccccgtggtggctccctggacccttcccactcc
agtgggcgtggttctgctgaggcagctgaagatgatgagatacggatgatcaatgagttc
cccagagtggccagcgttgcttcttcattggctgcccgcggccctgactcgggcatccaa
caggacgctgatgctgatggactgagtgatacatcctgtgagccacctccacctgatgcc
tggtacaagggccgaaaggctgggctgctgctcccaggccctggtccagggctctatcga
gaagagggtccaccagctgccagcactgctggggccttcctagggggctgtggcctgagc
cctgcccctcctggagactatggtttcccagctgatggcaagccctgtgtagcaggggca
ctaacagccatagtggcgggcgaagaggagcttcggggcagctacaactgggactacctg
ctgagctggtgtccccagttccaaccactggccagtgtcttcactgagattgctcggctc
aaggacgaggcacggccctgcccacccgcaccccgcattgacccaccacccctcattacc
gctgtggcccaccctggggccaagtctgtaccccctaagccagctagctcctcttcaggc
ccaggagtccgtggtcccttcctgcccgcccaccgctcccccattagccatgaaggatcc
ctgtcctcaactgccatgtcccccagtttttcaccttcactgtcaccactggctgcccgc
tcccctgttgtctccccctttggggtggcacaaggaccctctgcctcagctctgagtgca
gagcctggcctggaggcccctgatgaggcagagctacatatctag
DBGET
integrated database retrieval system
