Phascolarctos cinereus (koala): 110200951
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Entry
110200951 CDS
T05867
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110200951 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
110200951 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110200951 (THOC2)
03041 Spliceosome [BR:
pcw03041
]
110200951 (THOC2)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110200951 (THOC2)
Spliceosome [BR:
pcw03041
]
Complex C
Other components
EJC/TREX
110200951 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110200951 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110200951
NCBI-ProteinID:
XP_020832017
UniProt:
A0A6P5JCN2
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MPRGRCSTLTLSPSLYIRAPAPRERKMAATTSGPTSVVPYEWIKNWEKVGKLEFVQLCRA
LCENKNREHLIFRDLQQVIYELSCHVIRGTLKHEQASNVLSDIIDCREDMPSILADVFCV
LDIETSCLEEKSKRDHFTQLVLSCLYLVSDTILKERLDPETLESLGLIKQSQQFNQKSVK
IKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRV
LDVILEVYECRPEYDEFFVPLIESYMCMCEPQTLCHILGFKFKFYQEPNGETPASLYRVA
AILLQYDLIDLDDLYVHLLPVDNTILDEHKQEIVEAKQIVRKLTMVVLSSEKMDERDKEK
EKEEEKTDKPPDNQKLGLLEALLKISDWQHAQSIMDQMPPFYASSHRPIAIALCQLIHVT
VDPLYRRVGVPKGAKGSFVALLQNKRAPKQTESFEDMRKEVFNMLCHLGPHLSHDPILFA
KVVRLGKAFMKEFQTDGNKPEEKDRMETLLSCLLHITDQVLLPSLSLMDCNACMSEELWG
MFKSFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGK
LSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKH
DDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIE
ITEEITMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQR
NGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTP
HDAAFFLSRPMYAHHISSKYDELKKAEKGSKQQHKVHKYITSCELVMAPVHEAVVSLHLP
KVWDDISPQFYATFWSLTMYDLAVPRNSYEREVNKLKIQMKAVDDNQEMPPNKKKKEKER
CTALQDKLLEEEKKQIEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSA
IDAVYCARFVELVHQQKTLNFSTLLCYDRVFSDIIYTVASCTENEGSRYGRFLCCMLETV
TRWHSDRAIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVH
CLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYS
GQLKSRKPYMIPENEFHHKDPPPRNAVAATVQNGPGGVGLSTSLTINAAKLEESTTEETD
KVKEKSQGAVKVANKAASATPKATTSNGNNASNSKVTKENDKEKSGKEKDREKKEKTPAV
TPEAKALGKDGKEKPKEERANKDDKAKEIKEKTPKSDKEKEKFKKDEKSSKDEKFKTLVT
NTESKSAVEKERDKEPPREKDVAKETKSKENIKGGEKMPVAGSLKSPVPRSETSESEREQ
KRRKLDTHSSPSHSSTVKIYSQKRSSWFVSRLQPYFQVSRDSENYSSSPVISIHFLQDNL
SELKESSAKHYINHTTPILSKSKEREMEKKDLDKLRERSREREKKEDKDRKERKRDHSNN
DREAPQDSTKRRKEENGTTGASKHSKSESPSDSPRSNEKEKNKSKSSGKEKGNDAIKMDK
MEKSSSGSKKDSRHDKEKTEKKEKRDSTGGKEEKKQYPVKWKDCHL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgggcggtgctccactttgaccctctctccctcactatacatccgggctcca
gctcctcgagagaggaagatggcggcgacgacgagcggaccgacttcggtggttccctac
gagtggataaaaaactgggagaaagtgggcaagctcgaatttgtgcagttatgtcgagcc
ctctgtgaaaacaaaaaccgtgaacatttgattttcagagatctccagcaagttatctat
gagctatcttgtcatgtcataaggggaactctaaagcatgaacaagcatcaaatgttctc
agtgacattattgactgtcgtgaggatatgccctccatcctagctgatgtattctgcgtc
ttagatattgagacaagttgtttagaagaaaaaagcaagagagaccattttacacagttg
gtattatcctgtttgtatttagtttcagacacaatcttaaaggagcgtttggatccagaa
acattggaatctttagggcttattaagcagtcccagcagttcaatcaaaaatctgttaaa
atcaagacaaaacttttttataagcagcaaaaattcaatctcttaagagaagagaacgaa
ggttatgcaaaactgattgcagaattggggcaggatttgtctggaaatatcactagcgac
ttaatcttagaaaatatcaaatctttaataggatgctttaatctggacccgaacagagtt
ctggatgtcattttagaagtctatgaatgcagaccagaatatgatgagttttttgtacct
ttaatagaatcatatatgtgtatgtgtgaacctcaaacactatgtcatattctagggttc
aaattcaagttttatcaggaaccaaatggagagacgccagcatctttatatagagttgca
gcaatacttctgcagtatgatcttattgatttggacgatctttatgttcaccttcttcca
gtggataataccattcttgatgagcataaacaagaaattgtggaagccaagcaaattgtt
agaaaacttaccatggttgtcttgtcctctgaaaagatggatgagagagacaaagaaaag
gaaaaagaggaggagaaaacagataagccacctgacaaccagaaacttggtttattggaa
gctctgttaaagattagtgattggcaacatgcacagagcattatggatcagatgccccca
ttctatgcttcttcacacaggccaatagccattgctctttgccagcttatccatgtaact
gttgaccccctgtaccgaagagttggagtacctaaaggtgctaaaggatcgtttgttgct
ctgttacaaaacaagcgagcgccaaaacaaacagagagttttgaagatatgagaaaagaa
gtattcaatatgctctgtcatcttggtcctcacctttctcatgatcccattttgtttgca
aaagtggtgcgcttagggaaagcatttatgaaagagtttcagactgatggaaacaaacca
gaagaaaaagacagaatggaaaccttgcttagttgcttgctgcatattactgaccaggtg
ctacttccttctctttctttgatggattgcaatgcttgtatgtctgaagaactatgggga
atgtttaaatcatttccatatcaatacaggtatcgtctgtatggtcaatggaagaatgaa
acttataatagtcacccacttttggtaaaagttaaagctcaaacgatagacagagccaaa
tatataatgaagcgattgacaaaggaaaatgtgaagccttctggaagacaaattgggaaa
ttgagccacagcaatccaaccattttgtttgattacattttatcacaaatacagaagtat
gataacttaataacaccagtagttgattcattgaaatacctcacttcactgaactatgat
gtcttggcgtactgcatcattgaagctttggccaatccagagaaagaaagaatgaaacat
gatgatacaactatctcaagctggcttcaaagcctagcaagtttttgtggtgcagttttt
cgtaaatatccaattgaacttgctggtcttcttcaatatgtggcaaatcagctaaaagca
ggaaaaagttttgacctacttattttgaaagaggtggtacaaaaaatggcaggaattgaa
attactgaagaaataacaatggagcaactagaggccatgactggtggggaacagcttaaa
gctgagggtggctattttggacagatcagaaacactaaaaaatcctctcagaggttaaag
gatgcgttattggaccatgatcttgcccttcctctatgcttgcttatggctcagcagaga
aatggtgtaatctttcaggaaggaggagagaaacacttaaagcttgtgggaaaattatat
gaccagtgtcatgataccctggtacagtttggtggttttttagcatctaatctaagcaca
gaggattatataaagagagtgccttcaattgatgtgctttgtaatgagttccacacacct
catgatgcagcatttttcctgtctaggcctatgtatgcacaccatatctcatcaaagtat
gatgagcttaaaaaagctgagaagggaagtaagcagcaacataaagttcataaatacatc
acatcgtgtgagttagtgatggctccagtccatgaggcagtggtctctttgcatttgcca
aaagtgtgggatgacatcagcccccagttctatgccacattttggtcattgacaatgtat
gaccttgcagttccacgtaatagctatgaaagagaagtcaataaactgaaaatccagatg
aaagctgttgatgacaatcaggaaatgcctccaaataaaaagaaaaaggagaaggaacgc
tgtactgcccttcaggacaaacttcttgaagaagagaagaaacagatagaacatgtccag
agagttctgcagagactaaaactggaaaaagataactggcttttagcaaaatctacaaaa
aatgagaccatcacaaaatttctacaattgtgtatatttcctcgctgcattttttcagcg
attgatgctgtttactgtgctcgttttgtagaattggtacatcagcagaaaacgcttaat
ttttccacacttttgtgttacgatcgagttttctctgatataatttatacagtagcaagc
tgtactgaaaatgaaggtagtcgctatggaagatttctctgctgcatgttagaaactgtg
actaggtggcatagtgatagagcaatatatgaaaaggaatgtggtaactatccaggcttt
cttaccattttacgggcgactggatttgatggtggaaacaaagctgatcagttagactat
gagaattttaggcatgttgtacacaagtggcattataaactaacaaaggcatcagtgcat
tgccttgaaacgggtgaatatactcacatcaggaacattctcattgtgctgaccaaaata
cttccttggtatcctaaagttttgaacctgggccaggctttggaacgaagagtgcataag
atctgtcaagaagagaaagagaagagacctgacctatatgcattggctatgggctattct
gggcagttgaaaagtagaaagccatacatgatacctgaaaatgaattccaccacaaagat
cctcccccaaggaatgctgttgctgccactgtacaaaatgggcccggtggtgttggccta
tctacgtcactcacaataaatgcagctaaattggaagaaagcactactgaggagactgat
aaagtgaaggagaaatctcagggtgctgtgaaagttgctaataaagctgccagtgcaaca
cctaaagcgactacaagtaatggaaacaatgcttctaatagcaaagttactaaagaaaat
gacaaagagaaaagtgggaaagaaaaagacagagaaaaaaaagaaaagactccagctgtc
actccagaggccaaggcacttggtaaagatggtaaagaaaaaccaaaggaagagcgggca
aacaaagatgataaagcaaaagagatcaaggaaaaaacaccgaagtctgacaaggagaag
gaaaaattcaagaaagatgaaaaatcttctaaagatgaaaaattcaagacacttgttacc
aacactgaatcaaagtcagctgtagaaaaggaaagagacaaggaaccacccagagagaaa
gatgtagcgaaggaaacgaaatccaaggaaaatattaaaggaggagaaaagatgccagtt
gctgggtccttgaagtcacctgttccccgatcagaaacatcagagtctgaaagggaacaa
aaacgccgcaaacttgatacccactcttctccatcacattcctcaacagtaaagatttat
tcccagaaaaggagtagctggtttgtttcaaggttacaaccatacttccaagtttctcgg
gattctgagaactattccagctcacctgtcatctccattcattttctacaggacaacctc
agcgagctcaaggagtcatcagcaaagcactacattaatcacactactccaatactgtcc
aagagtaaggagagagaaatggaaaagaaagatttggacaagttaagggaaagatccaga
gagagagagaagaaagaggacaaggacaggaaagagcggaaaagggatcattcaaacaat
gaccgtgaagcaccccaggactccaccaagaggcgtaaagaggaaaatggaacaactggt
gcttcaaaacatagtaaaagtgaaagtccatcagattctcctcgttcaaatgagaaggaa
aaaaacaaatctaagtcttcaggcaaagaaaaaggcaacgatgccattaaaatggacaaa
atggagaaaagctcttctggtagcaaaaaggactctcgtcatgataaggaaaaaacagag
aaaaaagagaaacgggacagtacaggaggaaaggaggagaagaagcaatatcctgtgaaa
tggaaagattgtcatctttga
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integrated database retrieval system
