Phascolarctos cinereus (koala): 110201000
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Entry
110201000 CDS
T05867
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04613
Neutrophil extracellular trap formation
pcw05014
Amyotrophic lateral sclerosis
pcw05034
Alcoholism
pcw05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110201000 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110201000 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110201000 (HDAC6)
09165 Substance dependence
05034 Alcoholism
110201000 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcw01009
]
110201000 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110201000 (HDAC6)
04131 Membrane trafficking [BR:
pcw04131
]
110201000 (HDAC6)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110201000 (HDAC6)
Enzymes [BR:
pcw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110201000 (HDAC6)
Protein phosphatases and associated proteins [BR:
pcw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110201000 (HDAC6)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110201000 (HDAC6)
Membrane trafficking [BR:
pcw04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110201000 (HDAC6)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110201000 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110201000
NCBI-ProteinID:
XP_020832073
UniProt:
A0A6P5JD17
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MASQQEKPGPSHRGGSPSRSPSAGTRMMGQKRGGRKGSPVPRASPSLAEARRRGRAKKLS
QVSEQDLVTNLQDLDLEAESAVPSGTGLVLDERMGGFHCSWDESFPERPERLQAVQEQLA
RDGLLERCVHIEARPATPQELQLVHSQEYIELMASTPQMTESELRTLSDTYDSVYLHPNS
FPCALLATGALLRLVDALMVGEIRNGLALVRPPGHHAQRENMNGYCMFNNVAIAARYAQE
KHHVSRILIVDWDVHHGQGIQFIFEQDPSVLYFSVHRYEQGRFWPHLKASDWRATGSGKG
QGYTVNVPWNQVGMRDGDYISSFLHVLLPIALEFQPQMVLVAAGFDAMLGDPKGEMAATP
GGFAHLTHLLMSLARGKLILCLEGGYNLCSLALGVSATLQTLLGDPCPMLATPCVPCPSA
LASLSCTLAAHRPFWKVIQRFQSAPEDKEKDHREVSLGPPPNLEALGKPLEQALPLPLNR
TGLVYDERMMEHFNMWDSHHPERPERIAQIAQHHTELGLSPRCLPLPARSATDDELLSCH
SEEYIDRVRATSGLKPRDLHREGESYNSIYISPHSFSCARLAAGAACSLVEAILAREVQN
GLAIVRPPGHHAERDAACGFCFFNSVAVAARHAQEVAGRALRILIVDWDIHHGNGTQHIF
EEDPSVLYVSLHRYDHGAFFPVAEDGASSCVGQGQGEGFNVNVAWNGPRIGDPDYLTAMH
HIVMPIAYEFNPELVLVSAGFDAARGDPLGGCLVSPEGYAHMTHLLMGLAGGHIALVLEG
GYNLTSISESMAACTRTLLGDPPPSLPWLRPPLPGAFLSLAEVAQTHRKYWQSLRLTAVK
TRRKQRRPHWSWLRWRAPWGTSFLKRALQRHWPQD
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccagcaggagaagccaggcccgagtcatcgaggagggagccccagcagatct
ccctcggccggaacccggatgatggggcaaaagcgaggaggccggaagggatcaccagtc
ccgagagccagcccaagtttagctgaggcccgtcgcagagggcgagcaaagaaattgagt
caagtgtctgagcaagacctggtgaccaacctgcaagacctggaccttgaggcagagtca
gcagtaccctcagggactggcctggtgctggatgagagaatgggtggattccactgctcc
tgggatgaaagtttccctgaaagaccggaacgccttcaggctgtgcaggaacaactggcc
agggacggtctgcttgagcggtgtgtccacattgaggcccgtccagctactccccaggag
ctgcagcttgtccatagccaagaatacatagagctgatggcatccacaccacagatgact
gaatcggagcttcggaccctctcagacacctacgattctgtctacctgcacccgaactca
tttccttgtgccctcttggctactggggcgctgcttcggctggtggatgccttgatggta
ggcgagatccggaacggactagctcttgtcaggccccctggccatcatgcccagcgtgag
aacatgaatggctactgtatgttcaacaatgttgccattgctgcccgctatgcccaggaa
aagcaccatgtgtcacggatactcattgtggattgggatgtccaccatggtcaaggcata
cagttcatcttcgagcaggacccaagcgtcctctacttctccgttcaccgctatgagcag
ggtcgattctggccccacctaaaagcttctgactggcgggcaacagggagtggcaagggt
cagggatacactgtcaatgtgccttggaaccaggtggggatgagggatggggattacatc
agctccttcttacatgtgctgctgcccatcgctctggagtttcagcctcagatggttctg
gtggccgctggctttgatgccatgctgggggaccccaagggagaaatggcggccactccg
gggggttttgcccacctcactcacttgctcatgagtctggctagggggaagctgattctg
tgtctggagggcggctacaatttgtgttctcttgctttgggggtcagtgccactcttcag
accctcctgggagacccatgtcccatgttggccacaccttgtgtcccctgccccagtgct
ctggcttccttgtcctgtaccctggctgctcacagacctttctggaaggttatacagagg
tttcagtctgcccctgaggacaaggagaaagatcacagggaggtgagcctaggccccccg
cccaatcttgaggccctggggaaacccttggaacaggccctgcccctgcctctgaaccga
acaggcttggtatatgatgagaggatgatggagcatttcaatatgtgggacagccaccac
ccagagcggccagaacgcatcgcccagatcgcacagcaccacacggagcttgggctgagc
cctcgatgcctccctttgcctgcccgttccgctacggatgatgagctgttgagctgccac
agcgaggagtatattgaccgtgttcgggccacaagtgggctgaagcctcgggacctgcac
agggagggtgaaagttataactccatctacatctccccccattccttcagctgtgcccgg
cttgctgccggagctgcttgcagtttggtggaggccatcttggccagggaggtgcagaat
gggcttgccattgtccgcccaccaggccaccacgctgaaagagatgctgcctgtggtttc
tgcttcttcaattctgtggccgtggctgctcgccatgctcaggaggtggcaggccgggcc
ctccgaatcctgattgtggattgggacattcatcatggcaatggaacacagcacatattt
gaggaagacccaagtgtgctgtacgtatccttgcaccgctatgatcacggcgccttcttc
cccgtggctgaggatggtgctagcagctgtgtgggccagggccagggagagggtttcaac
gtcaatgtggcatggaacgggccccgcattggcgatcctgactacctcaccgccatgcac
catattgtgatgcccattgcctacgagttcaaccctgagttggtgctggtgtctgctggc
tttgatgctgctcggggggacccactaggaggttgcctagtctccccagagggctacgca
cacatgactcatctgctgatggggttggctggtggccacattgccctggtcctcgagggt
ggctacaacctaacatccatctcagaatctatggctgcttgtacccggacccttctaggt
gacccacccccatcgctcccctggcttcggcctccgctgcctggggccttcctctccctg
gctgaggttgcccagacccaccggaagtactggcagagccttcggcttactgcagtaaag
accaggaggaaacaaaggagacctcactggagctggttgagatggagagcaccctggggc
acgagcttcctgaagagagccctgcagaggcactggccacaggactaa
DBGET
integrated database retrieval system
