Phascolarctos cinereus (koala): 110201439
Help
Entry
110201439 CDS
T05867
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04137
Mitophagy - animal
pcw04141
Protein processing in endoplasmic reticulum
pcw05014
Amyotrophic lateral sclerosis
pcw05022
Pathways of neurodegeneration - multiple diseases
pcw05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110201439 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110201439 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
110201439 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110201439 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
110201439 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110201439 (VCP)
03009 Ribosome biogenesis [BR:
pcw03009
]
110201439 (VCP)
04131 Membrane trafficking [BR:
pcw04131
]
110201439 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcw04147
]
110201439 (VCP)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110201439 (VCP)
Ribosome biogenesis [BR:
pcw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110201439 (VCP)
Membrane trafficking [BR:
pcw04131
]
SNARE
SNARE associated proteins
Others
110201439 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110201439 (VCP)
Exosome [BR:
pcw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110201439 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
110201439
NCBI-ProteinID:
XP_020832729
UniProt:
A0A6P5JNW3
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGADSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGNVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccgattcaaaagcagatgacttatcaacagccattctcaagcagaag
aaccgccccaatcggttaattgttgatgaagctattaatgaagacaacagtgtggtgtcc
ctgtctcaggccaagatggatgaattgcagctcttccgaggtgacacagtgttgctcaaa
ggcaagaagagaagggaagctgtgtgcattgtcctttctgatgacacatgctcagatgag
aagattcgaatgaacagggttgtccgcaacaacctacgagtgcgcctgggggatgtcatc
agcatccagccgtgcccagatgtgaagtacggcaaacgtatccatgtgctgcccatcgat
gacacggtagaaggcatcaccggcaatctctttgaggtgtacctcaagccatacttcttg
gaagcttatcgacccatccggaaaggtgatatcttccttgtccgtggtggaatgcgtgct
gtagaattcaaagtggtggagacagatcccagcccctactgcattgttgctccagataca
gtgatccattgtgaaggggagcccatcaaacgagaggatgaagaggaatcgctcaatgaa
gtgggatatgatgacattggtggttgccgaaaacagttggctcagattaaggaaatggtg
gagctgccactgagacatccagccctcttcaaggccattggtgtaaagcctcctcgaggc
atcctgctctatgggcctcctggaacaggaaagaccctgattgctcgagctgtggcaaat
gagactggagcatttttctttctgatcaatggtcctgagattatgagcaagttagctggt
gagtcagagagcaacctgcggaaggcttttgaagaggcggagaagaatgctcctgctatc
attttcattgatgagctagacgccattgctcccaagagagagaagacccatggagaggta
gagcgtcgaattgtgtcgcagctattgactctcatggatggtttgaagcagagggcacat
gtgatcgttatggcagcaaccaacagacccaacagcattgacccagctcttagacggttt
ggtcgatttgacagggaggtagatattggaattcctgacgccacaggacgcttggaaatc
ttgcagatccataccaagaacatgaagctggcggatgatgtagacctagagcaggtggcc
aatgagacccatggacatgtaggtgcagatctggcagccctctgttcagaggcagcactg
caggccattcgaaagaagatggacctcatcgacctggaggatgagaccattgatgctgaa
gtcatgaactccctggctgtcaccatggatgacttccggtgggccctgagccagagtaat
ccgtcagcacttcgtgagactgttgtggaggtgccacaggtgacctgggaggacattggt
ggtctggaggatgtcaagcgggagctccaagagcttgttcagtaccctgtggagcaccca
gacaagttcctcaagtttggtatgacaccttccaagggagtcctgttctatgggccccct
ggctgtggaaaaaccctattggccaaagctattgccaatgaatgccaggcaaacttcatc
tccatcaagggccctgaacttctcacaatgtggtttggcgagtctgaggccaatgtccgt
gagatatttgacaaggcccgccaagctgccccctgcgttctgttctttgatgaactggat
tcaattgccaaggctcgtggtggcaacattggagatggaggaggtgctgctgacagagtc
atcaaccagatcctgacagagatggatggtatgtccacaaagaaaaacgtgttcatcatt
ggtgccaccaatcggcctgatattattgaccctgcaattcttcggcctggccgcttggac
cagcttatctacatacccttgcctgatgaaaagtcccgtgttgcaattcttaaggccaac
ctgaggaagtcacctgttgccaaggatgtagatttagagttcctggccaagatgactaat
ggcttctctggggctgacctgacagagatttgccagcgtgcttgcaaattggctatccgt
gagtccattgagagtgaaatccgacgagagcgggaaaggcagaccaatccctctgccatg
gaggtagaagaggatgacccggtccctgagatccgccgggaccactttgaggaggccatg
cgctttgcccgccgctctgtcagtgacaatgatatccgaaaatatgagatgtttgcccag
acccttcagcagagcaggggctttggcagcttcagattcccctcagggaaccaaggcggg
gctggccccagccagggcagtggaggaggcacaggcggcaacgtgtacacagaagacaat
gatgatgacctatatggctaa
DBGET
integrated database retrieval system
