Phascolarctos cinereus (koala): 110201639
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Entry
110201639 CDS
T05867
Symbol
SMC1B
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04110
Cell cycle
pcw04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110201639 (SMC1B)
04114 Oocyte meiosis
110201639 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110201639 (SMC1B)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110201639 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
110201639 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
110201639
NCBI-ProteinID:
XP_020833111
UniProt:
A0A6P5JPH0
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MGRLDRLLVENFKSWRGRQVLGPFRGFTCIVGPNGSGKSNVMDALSFVMGERPGQLRVKS
VQELIHGAHVGRPAAASASVEAVYVDESGAEKRFRRTVRGGSSEFHFNDNPVSRSVYIAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISSSKELVEEYEKKKKRVQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEADRYQVLLEELKGKKIQLQLFQLYHNEKKIQFLTS
ELDEINKELALTKDSLSVDENVVKSKKKDLGKLTRELQQMEKEMKALEAVLNQKRPQYIK
AKENTLHHLRKLETAKKSIRVSEKQCAKQEDDIEALEKEQQDLDRTWRDFEKQVEEERLR
RGRDIELEASQLDQYKELKEQVIKKVATMTQQLEKLQWEQRADEERRAFGDRRRAEVQGN
LKQIKEQIEDHNKRIEKLEEYTKACMDCLKEKTEQEGALVEELEQSRVRMAEVNDELSRI
GGELRNARIDHHEGKRQQKKAEVLEFLKRLYPESVFGRLLDLCHPIHKKYQLAVTKLFGR
YMIAIVVVSEKVARDCIRFLKEERAEPETFLALDYLDIKPINERLREMKGSKMVIDVVQT
QLPQLKKVIQFVCGNGLVCETVEEARHMAFDGPERLKTVALDGTLFLKSGVISGGSSDLK
LKARHWDEKEINRLKERRDQLISELKDLMKIRRKETDLKQIQALVQGTHTRLKYSQNELE
MIKKKQLASFHKEQSQLQSELLNIESQYTMLSNGIAERAQKITSFQERIDKVEDEIFHDF
CEEIGVENIREYENQHVKQQQEIDKKRLEFEKLKTRLNIQIEYSHNQLKKKTNKVSALKE
AILKDTSDIESLKEVEESCLRVVDELMTQRQQLKDMCVTQNTDIEQVQGQLEEARKKLMA
SNREVGKMQKETVAIQTALEQQRLERHNILLACKVQDIEIILLSGSLDEIIHVAVGTEAE
STQSTVAMYEQEEALQIDYSSLREDLKDLQSDKEIKAQLGLLQQHLATQEDVLLKTTAPN
LRALQKLQTVRDKFQESTDAFEASRKEARICRQEFEQVKKRRYDLFSQCFEHVSVSIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSMYMREQTHEHLQMIVISLKEEFYSKADALVGIY
PEQGDCMFSRVLTLDLSLYPDRNGREHRGRRQESRSRLT
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctggaccggctgctcgtggagaacttcaagtcgtggcgcggccgccaggtc
ctcgggccattccgcggcttcacctgcatcgtcggccccaacggctccggcaaatcgaat
gtgatggacgcgctgagcttcgtgatgggcgagaggccgggccagctgcgcgtcaagagc
gtgcaggagctgatccacggcgcgcacgtgggcaggccggcggcggccagcgccagcgtg
gaggccgtgtacgtggacgagagcggcgccgagaagcgcttccgcaggaccgtccgggga
gggtcatcagaatttcattttaatgacaatcctgtcagtcgttcagtctacatagcagag
ttggaaaaaattggcataattgtcaaagccaggaactgcctggtttttcagggcactgta
gaatccatttcaatgaaaaaacccaaagagagaactcagttttttgaagaaattagcagt
tcaaaggagcttgtcgaggaatatgagaaaaagaagaaaagggtacagaaagctgaagag
gatgcccagtttaattttaataaaaaaaaaaatgtggctgcggaacgcaaacatgcgaaa
ttagagaaggaagaggctgaccgctaccaggtcctcctcgaggaactgaaagggaagaag
atacaactgcagctttttcagctttaccacaatgagaaaaaaattcagtttctgaccagt
gaattagatgaaataaacaaggagttggctcttacaaaagactccctttctgtagatgaa
aatgtagtgaaaagcaagaaaaaggaccttggaaagttaacccgagagcttcagcaaatg
gaaaaggaaatgaaggctctggaggcggtgctgaaccagaagaggccccagtacatcaaa
gccaaggaaaacaccttacaccacctcagaaagttggagactgccaagaagtcaatcagg
gtcagtgagaagcagtgtgccaagcaagaagatgacatcgaagccctggaaaaagaacag
caagacttagacaggacctggagggattttgagaagcaggttgaagaagagaggctgcgt
cgagggagggacattgagctggaagccagtcagctggatcagtacaaggagctcaaggaa
caagtgatcaagaaggtagcaaccatgacccagcaactggaaaagctgcagtgggagcag
agggcagatgaggagagacgggcatttggggacaggaggcgagcggaagtccaggggaat
ttaaagcagataaaggaacaaatagaagaccataataaacgcatagagaaattggaggag
tacactaaagcgtgcatggattgtttgaaagagaagactgaacaagagggagcccttgtg
gaggagctcgagcagtccagagtcagaatggccgaagtgaacgacgaactgagtcgtatc
ggaggggagttacggaatgcacgcattgatcaccatgaaggaaagcgtcagcaaaagaaa
gctgaggttctggaattcctgaagaggctttatcctgagtctgtgtttggcagactcctt
gatttatgtcatcccattcacaagaagtaccagctcgctgtgaccaaactcttcggcagg
tacatgatagctattgtggtagtttcggaaaaagtagcaagagattgcattcgattcctg
aaagaagaaagagctgagcctgagacattccttgctctggattaccttgatatcaagccc
atcaacgaaaggctcagggagatgaaaggctccaagatggtgatagatgttgtgcagacc
cagcttccacagctgaagaaggtcatccagtttgtgtgtggcaatgggctggtgtgcgag
accgtggaagaggcccgccacatggcctttgatgggcccgagcggctgaagactgtcgct
ctagatggaacattatttttgaaatctggagtcatttctggagggtcgagtgacttaaaa
ctcaaagcgaggcactgggatgagaaggaaataaacagactgaaggaaagacgagaccag
ctcatcagtgagttaaaggacttaatgaaaatccgacgcaaagaaacagatttgaaacaa
atacaggctttggtacaggggactcacacccgactcaaatattctcaaaatgaactagag
atgattaaaaagaagcaactggccagttttcacaaggagcagtcccagctgcaaagtgaa
ttactgaacattgagtcgcagtacacaatgctgagcaatggcatcgcggaaagagcacaa
aaaattaccagctttcaagaaaggatagataaggtggaagatgaaattttccatgacttc
tgtgaagaaattggtgtggaaaatattcgtgaatatgaaaaccagcatgtgaaacagcag
caagaaatcgacaaaaagaggcttgaatttgagaaactgaaaactcgactaaacattcag
attgaatatagccacaaccaactgaagaagaaaacgaataaagtttctgctctgaaagaa
gccatcctcaaagataccagtgacattgagagtctgaaggaggtagaagaaagctgcctg
cgagtggtggatgagctcatgactcagcggcagcagctgaaggacatgtgtgtcacccag
aacaccgacatcgaacaggtgcagggccagctggaggaggcgcgcaagaagctgatggcc
agcaatagggaggtggggaaaatgcagaaggagacggtagccatccagacagccctggag
cagcagcggctggagaggcacaacatcctgctggcctgcaaggtccaggacatcgagatc
atcctcttgtcgggctccctggacgagatcatccacgtggcggtgggcacggaagccgag
agcacacagagcaccgttgccatgtatgagcaggaagaagccctgcagatagattacagc
agcctccgcgaggacctgaaggatctgcagtcggataaggagataaaggcgcagctgggc
ctgctccagcagcacctggcaacacaagaagacgttttactgaagaccaccgcccccaac
ctgcgagccctgcagaagctgcagactgtccgggacaagttccaagagtccacagatgct
ttcgaggccagcagaaaggaggccagaatttgtaggcaagagtttgaacaggtgaagaaa
aggagatacgacctcttcagccagtgctttgagcacgtctcggtgtccatcgaccagatc
tacaagaagctctgcagaaacaacagtgcccaggcatttctcagccccgagaacccggaa
gagccctatctggaaggaattagctacaactgcgtggctccaggcaagcgcttcatgccc
atggacaacctgtcagggggagagaagtgcgtggcggcgctggccctcctgttcgccgtg
cacagcttccgtcccgcgccgttctttgtcctcgatgaagtggacgcagccttggacaac
acaaacattggcaaggtgtcaatgtacatgagggagcagacccacgagcacttgcagatg
atcgtcatctccctcaaggaggagttctactccaaagcggatgcgctcgtgggcatctac
cctgagcagggggactgcatgttcagccgagtcctgaccctcgacttgtctttgtaccca
gaccgcaacggccgggagcatcgcggcaggcgccaagagagccgctcgagactcacctag
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