Entry |
|
Symbol |
DDX54
|
Name |
(RefSeq) ATP-dependent RNA helicase DDX54
|
KO |
|
Organism |
pcw Phascolarctos cinereus (koala)
|
Brite |
KEGG Orthology (KO) [BR:pcw00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:pcw03009]
110202092 (DDX54)
Enzymes [BR:pcw01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110202092 (DDX54)
Ribosome biogenesis [BR:pcw03009]
Eukaryotic type
Pre-60S particles
Helicases
110202092 (DDX54)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
861 aa
MHMVKAKGWRRGRTHGLHRGLHQARGGDMTDGDFEIQPEGSGDARARKPGPSKPLPAFPA
SEAASDVEPDTQEMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI
LDGKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGARALILSPTRELALQTMKFTKELG
KFTGLKTALILGGNRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVQYAVFDEAD
RLFEMGFAEQLQEIIGRLPEDHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQ
LKMAFFHIREDDKPAVLLHLLRNVVRPQDQTVVFVATKHHAEYLKELLTVQGMCCTHIYS
SLDQTARKINLARFVHGKCSALIVTDLAARGLDIPLLDNVINYNFPAKSKLFLHRVGRVA
RAGRSGTAYSLVAPDEVPYVCDLHLFLGRPLTLAIPNEKPSDASPDGVLGRVPRNVVDDE
ECRLITDHDVSSELQSLRRVAENAHKQYVRSRPGPSPESIKRAKDLDPALLGLHPLFSSQ
FEDEELERMKLVDSIRSYRSRATIFEINTTTRDPGSRVMRAKRKRDHKAIAKFQQGQSER
RQAPPDPATLPPKGQDPEEEEEESVEGAFSEVLGRKRWRPEAPGQEKRRQEPQRRDEEFY
VPYRPKDFDSERGLSISGEGSAFEQQASGAVLDLMGDEAHNLTKGRQLLKWDRKKKRFVG
NTGQEDKKKIKTESGRYISSSYKRDLYQKWKQKHKIGDHDSEEEGEGEAKKPRNQARGRR
RGRGVSAASGTSGAQGCVRSELKSKQQILKQRRRAEKQRFLQRGGLKRLSARNRRRAQEL
RQSAFGRGPGGNRKGKMRKKM |
NT seq |
2586 nt +upstreamnt +downstreamnt
atgcacatggtcaaggccaagggctggcggcgcggccgtacgcacggcttgcaccgaggc
ctccaccaggctcgcggcggcgacatgaccgatggggacttcgagatccagcccgaaggc
agcggggacgcccgggcccggaagccgggtcctagtaagcccctgcctgccttcccggct
tcggaggctgcctcagatgttgagcctgacacccaggaaatggttcgtgcccaaaacaag
aagaagaaaaagtctggaggcttccagtccatgggcttgagctaccctgtcttcaaaggc
atcatgaagaagggctacaaggtgcccacgcccatccagaggaagaccatcccggtgatt
ctggacggcaaggatgtggtggccatggcccgaacgggcagtggaaagacagcctgcttc
ctcatccccatgtttgagaaactcaaggcccacagtgcccagacgggtgcccgtgccctc
atcctgtcacccacccgggagctggccctgcagacgatgaagttcaccaaggagctgggc
aagttcaccggcctgaagacggccctgatccttggggggaacaggatggaagaccagttt
gcagcactgcatgagaacccagatataatcatcgccacccctgggcgcttggtgcacgtg
gccgtggagatgaacctgaaactgcagagtgtgcagtatgctgtctttgatgaggcggac
aggctgtttgaaatgggctttgcggagcagctgcaggagatcattggccgccttcccgag
gaccaccaaaccgtgctgttttctgccacgctgcctaaactcctcgtggagtttgcccga
gctggcctcacggagccagtgctgatccgtctcgatgtggacaccaaacttaatgagcaa
ctgaagatggccttcttccacatccgtgaggatgacaagccagctgtgctcctccacctc
ctgcgcaacgtggtccggccccaggaccagactgtggtcttcgtggccacgaagcaccac
gccgaatacctgaaagagctgctgacagtccagggcatgtgctgcacccacatctacagc
tccctggatcagacagcacgcaagatcaacctggccagatttgtccacggcaaatgctca
gccctcattgtcactgatctggccgcccggggcctggacatccccctgctggacaatgtg
atcaactacaacttccctgccaagagcaagctcttcctacatcgagtggggcgtgtggcc
cgggcgggccgaagtgggacagcttattccttggtggcccccgatgaggtcccctatgtc
tgtgaccttcacctcttcttgggccgcccgctcaccctggccatccccaatgagaagccc
tcagatgcctccccagacggcgtgctgggccgcgtgcctcggaacgtggtggacgatgag
gagtgccgcctgatcaccgatcacgatgtctcctcggagctccagagcctgcggcgggtg
gccgagaacgcccacaagcagtacgtccgttctcggccagggccctcccctgagtcgatc
aagagggccaaggacctggaccccgctctcctgggcctgcatcccctcttcagctcccag
tttgaggacgaggagctggagaggatgaagcttgtggacagcatcaggagctaccgatca
cgggctaccatctttgagatcaacactaccacgcgggacccaggcagccgggtgatgcgg
gccaagcgtaaacgagaccacaaggccattgccaagtttcagcagggacagagtgagcga
cggcaggccccgcctgacccagccaccctccccccgaagggccaggacccagaggaagag
gaggaggagagtgtggagggggcattctcagaggtgctgggccggaagagatggcggccc
gaggcgccgggccaggagaagaggcggcaggagccccagcgtcgggacgaggagttctac
gtgccctaccggcccaaggactttgacagcgagcggggcctgagcatcagtggcgagggc
agcgccttcgagcagcaggcatccggcgccgtccttgacctcatgggcgatgaggcccac
aacctgaccaagggccggcagctgctgaagtgggaccgtaagaagaagcggttcgtgggg
aatacgggccaggaggacaagaagaagataaagacggagagtggccgatatatcagcagc
tcctataagagagacctgtatcagaagtggaagcagaaacacaagattggtgaccacgac
tcggaggaggagggagagggagaggccaagaagccgaggaatcaagcccgaggccgcagg
agagggagaggggtgtcagcagccagtggaacgtcgggggcccaggggtgcgtgcgctcg
gagctgaagagcaagcagcagattctgaagcagcgccgccgtgccgagaagcagcgcttc
ctgcagcgtggaggcctcaagcggctctctgcccgcaaccggcgccgggcccaggagctc
cggcagagcgccttcggccgggggcctgggggcaaccgcaagggcaagatgaggaagaag
atgtga |