Phascolarctos cinereus (koala): 110202377
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Entry
110202377 CDS
T05867
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcw03000
]
110202377 (NPAS1)
Transcription factors [BR:
pcw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110202377 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
110202377
NCBI-ProteinID:
XP_020834107
UniProt:
A0A6P5JIN0
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MAAHFSGSEVKCVSVEWDFLQGLLVKAPPVPCLQALRKEKSRNAARSRRGKENFEFYELA
KTLPLPSAITSQLDKASIVRLSITYLRLRDFAALGDPPWSSPRADPPPAPVSGAPGRRET
SALFADLFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYV
HPGDHSEVLEQLGLRAPPPGPGAPPSGPSSASSSSSSSSSASSISEAPETDEETEAQTEK
ETGSRSPSRARMGAQLLCLHTLHSFHSKPLSFPLVKQPTSELAPPVIAPRNQPGSLERSF
FIRMKSTLTKRGLHVKASGYKVIHVTGRLRTQLLTARRGQALGLVALGHTLPPAPLSELP
LHGHTLVFRLSLALTIISCESRISDYMDVGPSELIGRSCYQYIHGEDVAGIRQSHLDLLD
KGQVVTGYYRWLQRAGGFIWLQSVATVAISGKSPGERHVVWVSYILSQVESGHVALDALQ
LPSTVPQEDLSDPEPDIKESKAQVEGEQGASQPEPGARQARSKRIKLEPARGSSSQGETT
GGEGGEDSDDGESRHPVSRPEFTSVIRAGSLKRETMRPWSYAASYAAGEPFHRPPSPPDS
PSPPTLVHAGYLAPTRGLYTSTIRYGPAELGLAIPTPGLVYQHLQRLTGPGPTFPDALYP
SVPFLGPDRKGD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccacttctcaggaagcgaggtcaagtgcgtcagcgttgagtgggacttcctt
cagggattgctggtcaaagccccgcctgtgccctgcctgcaggccttgaggaaggagaag
tcccggaatgcggcccgctcccgccggggcaaagaaaacttcgaattttatgagctggcg
aagacgctgcccctgcccagcgccatcacgagccagctggacaaggcatccatcgtgcgg
ctcagcatcacctacctccgcctgcgggatttcgctgccctcggagaccctccctggagt
tcacccagagccgacccgccaccagcgccagtctctggtgcccctggacggagagagacc
tctgccctatttgctgacctctttgaacagcatttgggaggccacattcttcagtcgctg
gacgggttcgtgttcgccttgaaccaggagggcaagtttctctacatctcagagacagtt
tccatctatctgggcctctctcaggtggagctgactggcagcagcgtgtttgactacgtg
catccaggggaccattccgaggtgttggagcagctcgggctgagggctccaccccctggg
cctggggcgccaccttctggcccctcctccgcctcctcctcttcatcttcttcatcctca
gcttcctcaatctctgaagccccagagactgatgaggagactgaagcgcagacagaaaaa
gagactggctcaaggtcacccagcagagccaggatgggagcccagctcctctgccttcac
accctgcactctttccactccaaaccattgtccttccctcttgtaaagcaacccacctca
gagctggccccccctgtgattgctcctcgaaatcaacctggctcccttgaacgttccttc
ttcatccgaatgaaatccacactcaccaagcgggggttgcacgtcaaggcttcgggatac
aaggtaattcacgtgactggtcggcttaggactcagctattgacagcccgacgaggccaa
gctttgggtctggttgccctaggccacaccttgcccccagctccactcagcgaactcccc
ctgcatggccacacacttgtctttcgcctcagcctggccttgactatcatctcctgtgag
agcaggattagtgactacatggatgtgggcccctcggaactgattggacgaagttgctac
cagtatatccacggggaggatgtggctggaatccgccagagccacctggacttgctggac
aaagggcaggtggtgacaggctattaccgatggctgcagagggctggaggcttcatctgg
ctccagtccgtggccacagtggccatcagtggcaagagcccaggcgagcgccacgtggtc
tgggtcagctacatactcagtcaagtggaaagtggccacgtggccctggatgctctccag
ctccccagcaccgtcccccaagaggacctgtcagatccagaacctgacatcaaagagtcc
aaggcccaggtggagggtgagcaaggagcctcccagcctgagcctggggcccgccaagcc
cgaagcaaacgcatcaaactggaaccagccagaggaagcagcagccaaggagagaccact
ggcggggaaggtggtgaggacagtgatgatggggagtccagacacccggtttctcggcct
gaattcacctctgtcatccgggcagggagcttgaagcgggagaccatgaggccgtggagc
tatgcggcctcctacgcagctggggagcccttccacaggcccccttcacctcctgactcc
ccatccccacccactctggtccatgctggttacctagcccccactaggggcctatatacc
agcaccatccgatatgggccagcagagctaggcctggcaatccccaccccagggctggtt
tatcagcacctccagaggctcactggcccgggcccaacctttcctgatgccctctacccc
agcgtgcccttcctgggaccagacaggaaaggggactga
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