Phascolarctos cinereus (koala): 110202450
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Entry
110202450 CDS
T05867
Symbol
PALB2
Name
(RefSeq) LOW QUALITY PROTEIN: partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03440
Homologous recombination
pcw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110202450 (PALB2)
03460 Fanconi anemia pathway
110202450 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110202450 (PALB2)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110202450 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
110202450 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
DUF1564
Motif
Other DBs
NCBI-GeneID:
110202450
NCBI-ProteinID:
XP_020834283
UniProt:
A0A6P5JLQ8
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MEDSAGRVLSCEEKEKLKEKLAFLKREYSKTLARCKRAQRAEKAKNSSKTEQNCMLKQET
SIQTNSEPEDKVSLGDKLEACTLQIDVCLNEETKEKTAVTLDFEPELLSSSGICPEHIGN
NCQENFLCSIAGQDDEKKQNKQPLNRMKNRKKTPVSKGNESFFGSDSLMNNRQRQQKQVF
AIKNPELPVFQIRNQFSCGKSEIQNSPRPITEIGECLVAPAAELENDASAILKENNLPKM
TTFSLHNPLDDSNIQQLECVPLEEICDNYKLATEHSMDLIHVSPKKLEEGGKEYVISPGD
QMRNDDINVDKKMSSPSTLPSDDKAFSANELNHSLSRNTHFDAQNQSLKPLEPSGNLLDS
RGENLEKKEVLSETVSPTTEMISPGPTENPLNSCTMLDGLLFPVEYYVRTTRRMSNCQRT
VDLEAVIQSQLGVKRKGFKHKCKQGAKNLDLSSQEQSEVPLSDQGNSSSPFQMSFSSTTE
GSPPALPTKDYDFALNACKRRSSRRHRGRKFFCKKGINDRDSELRVSDKFDIKKPKKDVA
LCRASPRKKEHARGEKTVTDKSRCILANVDKKASTSVTQGRQDCIQNKNLHCSIGNDSLI
VDNTSFDLSFHLKNGMLGFEKLSSCINITDFDLPDEVFGFLKLEKLKSYSAKQIKPFDSG
DGGKQCNDGDGLILEALVPKKIVTEKKNLAEDVITVTRNSQPKKAKSIPQNMLLFTPSST
NLPATNNQLEADVCSPVFPIVGATPVFGSQIHSRNVAIEITGPTFCTPRHPYFKKPDNLT
GDNQCNNLPSALKLDTNMHSLGWEVKKEPDQIVPSSERKFDSDGSSQETLPPVDSITFKE
RPLLGSTFQTKIAERPAEIWCDSLKLGNLQLVSKLKNPSDSCSVDVSTVWWEVTGCKESC
IITACEFTVSLWKSLDNWQWRKVYTWYFTEIPVLQIIPLWDACNLVCVALGHLEIREIRL
LFCSDDECLKQSLVKSGNIKAVLGLRNKRLVCSNGTLHDHQVDLMTFSGSGRSKEKQTLM
XPEETILAFAEVQGMQDALLGTTLMSNIVIWNLKTGQLLKKMQIGNSYQASICHKAYSDM
GLLFVVLSHPHGKEIESMGSPVFRLIVINPKTALSVDVRPYSLPQGHTGRFLDGEVKDNL
AAAVLTSGTIAVWDLFLGHCTALLLPNSDGNWSFVKWSGTDSCLLAGQKNGSVFVYSYI
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcggcggggagagtgctcagctgtgaggagaaggagaagttgaaggaaaag
ctggcattcttaaaaagagagtacagcaagacactggctcgatgcaagcgtgctcaaaga
gctgagaaggcaaaaaattcttcgaaaactgaacagaattgcatgcttaagcaggaaacc
tcaatacaaacaaactcagagccagaagacaaagtatctctcggtgataaattagaagca
tgtacactacagattgatgtctgtcttaacgaagaaaccaaggagaaaacagctgtcaca
cttgactttgagcctgagttattgagctcatcaggaatatgtcctgaacacataggtaat
aactgccaggaaaatttcctttgtagcattgctggacaagatgatgagaaaaagcaaaat
aaacagccattgaatagaatgaagaatcgaaaaaagacaccagtatcaaaaggaaatgaa
tctttctttggctctgattcacttatgaataatagacaaagacagcaaaaacaagtgttt
gctataaaaaatcctgagttaccagtgtttcagataagaaatcagttttcgtgtggtaaa
agtgagatccagaattctcccagaccaatcacagaaatcggtgaatgtcttgttgctcca
gctgctgaactcgaaaatgatgccagtgcaattttgaaagaaaataatcttccgaagatg
actacattttctttacacaatcctttggatgacagtaatattcagcaacttgagtgtgtt
cctcttgaagaaatctgtgataactataagctggctaccgagcattcgatggaccttatt
catgtttcacctaaaaaattagaggaaggagggaaagaatatgttatctctccaggtgac
caaatgagaaatgatgacataaatgtggataaaaagatgtctagcccttccaccttgcca
tcagatgacaaagcattttctgcaaatgagctcaatcattcattaagcagaaacacacat
tttgatgcacagaatcagagcttgaagcctttagaaccatctggtaacctacttgatagc
agaggtgaaaatcttgaaaagaaagaggtcctaagtgagactgtgagtcctaccacagaa
atgatctctcctggtcctacagaaaatccattaaattcttgtacaatgcttgacggtctt
ctgtttcctgtggagtattacgttaggactacacgacgaatgtcaaattgtcagaggaca
gttgacctggaagctgtaattcagagccaattaggtgtaaaaagaaaaggatttaagcat
aaatgtaagcagggagctaaaaatttagatctgtcctcccaagagcaaagtgaagttccg
ttatctgaccaaggaaattcaagtagtcctttccaaatgtctttctcatcaaccactgaa
ggcagccctcctgctttgcccactaaagactatgattttgctctgaatgcttgtaaaaga
cgatcaagtagaagacacagagggagaaaattcttttgcaaaaaaggaataaatgatcgg
gactcagagctgcgagtttctgataagttcgatattaaaaaacccaagaaagatgttgcc
ttgtgcagagcatctccaaggaaaaaagaacatgctcggggtgaaaaaacagtcacagac
aaatcaaggtgtatccttgctaatgttgacaaaaaagcatccacatcagtaacacaaggg
agacaagattgtattcaaaataagaaccttcattgttccattggtaatgactccttgatt
gtggataataccagttttgatctttcatttcatcttaagaatggaatgcttggttttgag
aagttgtcatcatgcatcaacatcactgactttgacttgcctgatgaggtctttggtttt
cttaagcttgagaaattaaagtcttactcagcaaaacaaatcaaacccttcgattcagga
gatggtggaaaacaatgtaatgatggagatggtcttattttggaggcactggtgcctaaa
aagatagttacagaaaagaagaatttagcagaggatgttattactgtaacaagaaactcg
cagccaaaaaaggcaaagagtatccctcaaaatatgctacttttcacaccttctagtact
aacctacctgccacaaataaccagcttgaagcagatgtgtgttctcccgttttccctatt
gtaggtgccactccagtttttggttcccaaattcacagcagaaatgtggctatagaaatt
actggacctactttttgtacacctagacatccttactttaaaaaaccagacaatcttact
ggagataatcagtgtaacaatttacccagtgcattgaaattggatactaacatgcattca
ttaggatgggaggtcaaaaaagagcctgaccaaatagtaccttcttctgaaaggaaattt
gacagtgacggtagttctcaagaaactcttccacctgttgactcaatcactttcaaagaa
agaccactgttgggaagcactttccagactaaaatagcagaacgtcctgctgaaatttgg
tgtgatagtttgaaactgggtaacctacagctagtttcaaagttaaagaatccttcagat
tcctgttctgtggatgtgagtactgtgtggtgggaagtaactggctgtaaggagtcatgt
atcataactgcctgtgaatttacggtttctctctggaaatctctggataactggcagtgg
agaaaagtttacacatggtacttcacagagattccagtactacaaattattccactttgg
gatgcttgtaatcttgtgtgtgttgctttgggacatctagaaattagagaaatcagatta
ttgttttgttctgatgatgaatgcttaaagcagtcacttgtaaaatctggaaatataaaa
gctgtgcttggacttagaaacaagaggctagtctgtagcaatgggacacttcatgatcac
caagtagacctcatgaccttttcaggatctggaagaagtaaggaaaaacagacattgatg
nctccagaagaaaccatcctggcttttgctgaggttcaaggaatgcaagatgctttgctt
ggcacaactctgatgagcaatattgttatctggaatttaaaaactggtcaacttctgaaa
aagatgcagattggtaattcctaccaagcttcaatctgtcacaaagcctattctgatatg
gggctcctgtttgttgttttaagtcatcctcatggcaaagaaatcgaatcaatgggaagt
cctgtatttcggctgattgtaattaatcctaagacagccctaagtgttgatgtaaggcct
tactcacttccccaaggccatactggaaggtttctggatggtgaggtgaaggataattta
gcagcagctgtactaacttctggaacaatagctgtttgggacttgtttctaggacattgt
actgctcttcttctgcccaattctgatggaaattggtcttttgttaagtggtcaggtaca
gattcttgtctgctagctggccagaaaaatggaagtgtgtttgtgtacagctacatatga
DBGET
integrated database retrieval system
