Phascolarctos cinereus (koala): 110203640
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Entry
110203640 CDS
T05867
Symbol
ERCC2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03022
Basal transcription factors
pcw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110203640 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
110203640 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110203640 (ERCC2)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110203640 (ERCC2)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110203640 (ERCC2)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110203640 (ERCC2)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110203640 (ERCC2)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110203640 (ERCC2)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110203640 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
110203640
NCBI-ProteinID:
XP_020835793
UniProt:
A0A6P5JR16
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVHFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQ
RVHPLEVTKLIYCSRTVPEIEKVIEELRKLMDSYEKQEGEKVPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQHQQDASTPHCRFYEEFDAQGRQVPIPWGIYNLDDL
KAFGLQKGWCPYFLARYSILHANVIVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQNNLETLQRTVHKIKETDEKRLREEYRRLVEGLREASLARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRTQHVVQESPPAFLGG
LAHRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLSNFATLVSTYSRGFTIIIEP
FDERTPTISNPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVAAWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEFLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEDTLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaatgtcgatgggctcctggtccacttcccctatgactacatctaccccgaa
caattctcttacatgttggagctcaagcggaccctggatgccaagggtcacggggtcctc
gagatgccctcgggcactggcaagaccatctccctcctggccttgattgttgcataccag
cgggttcaccccctggaagtaaccaagctcatctactgctcaaggactgtccctgagatt
gagaaggtgattgaggagctcaggaagctgatggactcctatgagaagcaggagggagag
aaggtgccattcctgggcctggccttgagctctcggaagaatctgtgcattcacccggag
gtgacccccttgcggtttggaaaggacgtggatgggaagtgtcacagcctgacggcctct
tatgtgcgggcccagcaccagcaggacgccagcacccctcactgccgcttctatgaggag
tttgatgcccaaggccgccaagtgcccatcccctggggcatctacaacctggacgacctg
aaggcctttggactacagaaaggctggtgcccgtacttccttgcccggtactcgatcctt
catgccaacgtgatcgtctacagctaccactaccttctggacccgaagatcgctgacctc
gtttccaaagagctggctcggaaggctgttgtggtctttgatgaggcccacaacattgac
aacgtgtgcatcgactctatgagtgtgaacctgacccgccggaccctggaccgctgtcag
aacaacttggagacgttgcagcgcacggttcacaagatcaaggagacagatgaaaaacgt
ctgcgggaggaataccgccgcctggtggaggggcttcgagaggccagcttagcccgtgag
actgacgcccacctggccaacccggtccttcccgacgaggtgttgcaggaggcagtgcct
ggctccatccggacggcggagcacttcctgggcttcctgcggcgcctgctggaatatgtc
aagtggcgcctccggacgcagcacgtggtccaggagagcccgccagccttcctggggggc
ctggcccaccgtgtctgtatccagcgcaagcccttgcggttctgtgcagagcgactgagg
tctctgctccacacgctcgagatcgcggatctggccgacttctcccccctcaccctcctc
tccaactttgccacgctggtcagcacctactcccgaggcttcaccattatcattgagccc
tttgatgagaggaccccaaccatctccaacccggtgctgcatttcagctgcatggatgcc
tccctggccatcaagccggtgtttgagcgctttcagtctgtgatcatcacctcagggacc
ctgtcccctttggatatctaccccaaaatattggacttccaccctgtgaccatggcaacc
ttcaccatgaccctagcccgggtctgcctctgccccatgatcgttggccgaggcaatgat
caagtggccatcagctccaagtttgagacccgagaggatatcgctgtaatccggaattac
gggaacttgctcctggagatgtccgctgtggtccctgacggcattgttgcctttttcacc
agctatcagtacatggagagtaccgtggctgcctggtatgagcagggcatcctggagaac
attcagcggaacaagcttcttttcattgagacccaggatggagcagagacgagtgtggcc
ttggagaagtaccaggaggcgtgtgagaatggccgaggggccatcctgctgtccgtggcc
agaggcaaggtgtccgagggcatcgactttgtccaccactatggccgggccgtcatcatg
tttggtgtcccctatgtctacacccaaagccgaattctcaaggcccgcctggagttcctg
cgtgatcagttccagatccgagagaatgacttcctgacctttgatgccatgcgacacgca
gcccagtgtgtgggccgcgccatccggggcaagactgactatgggctcatgatctttgct
gacaagcgcttcgcccgggccgataagcgcgggaagctccctcgctggattcaggagcac
ctgacagacgccaacctcaacctgacggtggacgagggcgtgcaggtggccaagtacttc
ctgaggcagatggcccagcccttccacagggaggaccagctgggactgtctttgctgagc
ctggagcagcttcagtccgaggacactctccgccggatagagcagatcgcccagcagctg
tga
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