Phascolarctos cinereus (koala): 110205173
Help
Entry
110205173 CDS
T05867
Symbol
TAF4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03022
Basal transcription factors
pcw05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110205173 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110205173 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110205173 (TAF4)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110205173 (TAF4)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110205173 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
110205173 (TAF4)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110205173 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
110205173
NCBI-ProteinID:
XP_020837165
UniProt:
A0A6P5JST5
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDMVGSLESQLAASTAHHHHHPHRTPEIRAGGAGGLGN
HVVSGSPGGAGVVGAAAAAAAAAAGANVQTESSKMGLAQEITKAGAGGVQGGVINHNTTR
SQGSALLDGTSSSTSTSSSSTSTSSTTAGSEAAAAAAAAAPGAAAISQGKSVVISSTMAT
ALSSRNGKIGTTTAVQTLNGSNVVMNSHHSGSAVAFAGTPAAAAAPAVTLVNNGPGSVVL
PLGKGNAVNAVLPSASSNTVIQTSSFLSTAVSSSSSPTVISSSSIGSAGPTVALVRPPIH
TAGPAAASVAAATQNGSNTVINSTISVGSLPATAAGSVATVGSGVSLQASLVNSQTGSNM
PATATTQVIKSESPKTIVQAVPQQQTLTTSGQSTTGGNMIIGQTMQGGIPNPSGIPPPPP
APGTPTGMAKGTANTVAQSLPRTPTATTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLP
PGMVLIRSENGQLLMLPQQTLAQMQAQAHAQTQPQNTMAPRPATPTSAPPVQISTFQAPG
TPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPVVQPQIVLGSTAQTAALGTASAVQPG
TPQRTVQGATPTSAAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDG
KIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTA
LTAVVLSSSVQRTAGKTAATVTSTLQPPVISLTQPTPVSVSKQGQPTPLVIQQPQKPGAL
IRPPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNQLQTVPVVKPAVLPGTKALSTVSAQA
AAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETF
LLSAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKVSETAQQKNLSYKDDE
RYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQ
QQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGSGTEVSGTSTAVPGSSGVGTTRQFTR
QRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcggatctgctggatgaggttttcttcaacagcgaggtggacgagaaa
gtggtgagcgacatggtgggctctctggagtcccagctggcggccagcacggcccatcac
caccatcaccctcacaggacgcccgagatccgggccggaggcgccggggggctggggaac
catgttgtgagcggcagccctggaggagccggagtagtaggagccgccgccgccgccgcc
gccgccgccgccggtgctaatgtccagacggagagcagcaaaatgggactggcccaggag
atcacaaaagcaggggccggaggagtgcaagggggtgttattaatcacaacacgaccagg
tcccagggttcagctctgctggatggaacctcctcatccacctccaccagcagcagcagc
accagcactagcagcaccacagcaggatccgaagctgctgctgctgctgctgctgctgct
ccaggggctgctgccatcagtcagggcaaatcggtggtcatcagcagcaccatggcaacc
gccttgtcctccagaaacggcaaaatcggtaccaccaccgcggtgcaaactttgaatggg
agtaacgtcgtgatgaactctcaccattcaggaagtgctgttgcttttgctgggactccg
gctgctgctgctgcacctgctgtcaccctagttaacaacggaccaggatctgtggtgttg
ccgctggggaagggaaatgctgtcaatgctgttttgccttcagcttcttctaacactgtc
atccagacttcttctttcctcagcactgctgtgtcctcctcttcctcacccaccgttatc
tcctcctccagcattggaagtgccggacctactgtggcactagtgaggccaccaattcac
acagcaggacctgctgcagcttctgttgctgcagctacccagaatgggagcaatactgtg
atcaattcaactatcagtgtggggagtttgcctgctactgctgctggttctgtagctact
gtgggttctggagtttcccttcaggcatcccttgtaaacagccaaactggctccaacatg
ccagctacagccaccacacaggtcatcaaatcagagtcccctaaaactatagtgcaggca
gtgcctcaacagcaaacattgacaaccagtggccagtccaccacagggggtaacatgatc
attgggcaaactatgcaaggtggtatccccaatcctagtgggataccacctcctcctcca
gctcctgggacccctacagggatggctaaaggcactgccaatacagtggcacaaagtctg
ccaaggactccaacagctactacaggtggtatccgagcaacgttgactcctacagtttta
gcaccccgtctgcctcaaccacctcagaatcctacaaatattcaaaattttcagctgccc
ccaggtatggtcctcattcgaagtgagaatggacagttgttaatgcttcctcaacagacc
ttggcacagatgcaggcacaggcccatgctcagacccagcctcagaataccatggcacca
cgccctgcaactcccacaagtgcccctcctgttcagatatcaacttttcaggctcctgga
acaccaattattgcacggcaagtgacaccaactaccataattaagcaagtgtctcaggca
cagacaacggtacagccaactacaacattacaacgttctcctgtagtacagcctcagatt
gttctgggtagtactgcacagacagctgcattaggaacagcttccgctgtacagcctgga
actcctcagaggactgtacaaggagccacaccaacttctgctgctgccacagaaactatg
gaaaacgtgaagaaatgtaagaattttctatctacgttaataaaactggcctcatctggt
aaacagtctacagagacagcagcaaatgtcaaagaattagtacagaatttgctggatggg
aaaattgaagcagaagattttaccagcaggttataccgagaacttaattcttcacctcaa
ccttacctcgtgcctttcctgaagaggagtttacctgccttgagacagttaacaccagat
tcggcagcttttatccagcaaagtcagcaacaacagcccacaacacaggcaacaactgcc
ctgacagcagtggtgctgagcagctctgttcagcgcacagcagggaagactgctgccacc
gtcacaagcactcttcagccgccagtcatcagtctgacacaacccacaccagtcagcgtt
agcaaacaaggacaacctacacctctggttatccaacaaccacagaaaccaggggcattg
ataagacctccacaggtaacattgacacaaactcctatggtagcattgcgacagccacac
aatcgtatcatgctcactactcctcagcaaattcaactaaatcagcttcagacagttcct
gtggtcaaacctgctgtattacctggcaccaaagctctttctactgtttcagcacaagcg
gctgctgcacaaaaaaataaacttaaagaacctggaggtggttctttcagggatgatgat
gacattaatgatgttgcatcaatggcaggagtgaacttatcagaggagagtgcaaggata
ttggcgacaaattctgaattagtgggcacattaacaagatcttgtaaagatgaaaccttt
ctcctttcagcacctttacaaagaaggatattagaaataggtaaaaagcatggaataaca
gaactgcatcctgatgtagtaagttatgtgtcacatgcaacacagcaaaggctacaaaac
ctcgtagaaaaagtatcagaaactgcccaacaaaagaatctttcttataaggatgatgaa
agatatgaacaggcaagtgatgtccgggcacagctcaaattctttgaacaacttgatcaa
attgaaaaacagaggaaagatgaacaagagagagaaattttaatgcgagcggcaaagtct
cgatctaggcaagaagatccagaacaacttaggttgaaacagaaggcaaaggagatgcag
caacaagagctagcacagatgaggcaaagggatgccaacttaacagcattggcagcaatt
ggtcctaggaagaaaaggaaagtggattctccgggacctggatcagggacagaggtatct
ggaacaagtacagcagtcccgggcagttctggagttggaacgactagacagtttacgcga
caaaggataacacgggtcaacctcagggacctcatattttgtttagaaaatgagcgagag
acaagccattcactattgctatacaaagcattccttaagtaa
DBGET
integrated database retrieval system
