Phascolarctos cinereus (koala): 110205199
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Entry
110205199 CDS
T05867
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110205199 (COL20A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
DEP
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
110205199
NCBI-ProteinID:
XP_020837231
UniProt:
A0A6P5JXG6
LinkDB
All DBs
Position
Unknown
AA seq
1751 aa
AA seq
DB search
MEGAPSNLRKKAAERQYRAEVMLAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAKELTDW
LIDHKEAPDRETGIRLMQKLMDHYIIHHVCDEHSDYKDAKLLYRFRKDDGTFPLNKDVKV
FLRGQSLYEALVSADGSILKVREEKSVRYQRAFMGCEMVDWLTQEGEAASRKEAVELCRT
LLEHGIIQHVSTKHHFFDSNLLYQFRINFRRRRRLTELLTDNIRAVPESPDSPFCLRKLN
PDQGNTSFLSVQPNKEIKVVSAVRRSSVTSLAGGAGPYYNSPPLLGLPPGSECNPKSVLK
RQVTSEELLSPGAPYVKKTLTIVGDAVGWGFVVRGGRPCHIQAVDPGGPAAAAGMKAQSA
MTAQGCICIWLVWASVLDLIHGQGPNLGTSRLRLTVLSEDRLQMKWKESEGNTNGYKVQV
KPMAGDSEQEVMLTTKTPKVTVVGLSPTKEYTLQIFALSGSRDTLMARRRFVIEDLKSIS
MGRNSRKPSGEILEPIPSSVGNHEFEQVPELGATSPTWSGVSPTLGPQFHCDTSIPVDIV
FLVDGSWSIGRSNFRLIREFLANIISPFHIXPDKVRIGLSQYSGDPRTEWDLNSFNTKDE
VLEAVRNLRYKGGNTFTGLALTHVLEQNLKLEAGSRSEAVKVVILLTDGKSQDDARLAAQ
VMKDLGMDIFAIGVKNADESELTHLASLPLDVTVHNVQDFHLLGNLTKRLTRLLCWKIQE
RSRSTDLGVPANRWPHTSPTNLIVSEVTATGLRLAWTPPLEPARKYRIVYHPSRGGTPME
VTVEGAASSAQLLNLTSNTEYLVTVLPVYKDGDGEGLRDIVTTLPLSPPSSLTIFSVTHS
SIHLTWQPANKATQYLIHCTSSASPREQKVEEEEEGGKEVRVGDPEVLLEGLAPGTEYSI
AVYALFGEEVSAPQSIRVKTLSLDLPKHLSFSEVSHSSVRVHWEASSRVVRMYHVSYVSL
EGNQAGEIDVSRNASSVKLAPLSSSTSYIVSVTSIYKEGDSSTLTGRVTTRKVPAPSHLK
VTELPGDDVRLEWAAAAASGVVVYQIKWMPLGEGKAYEISVPGNLGTATLPGLGKHAEYE
ISILAYYRDGARSDTVSLRYTPMSRNPPLNLVLTSETPSSLRILWTPPNDNVLHYRLTYA
LASGSSPEKTIIIPGPENHVTLPLLLPGTKYKIMVSAVYRLGESNVVSAIGRTAACPALR
ANGSLPGFDMMEAFGLVEKEYASIKGVSMEPSIFSGTRTYTLFRDVQLMRRASEIHPAAL
PPEHTISFLLRVLPETPREPFALWQITDETFEPLLGVTLDAGRKSLTYFHRDHKAELQEV
TFDLQEVKKIFYGSFHKVHVAVSRTKVKLYVDCRKVTERLISEAGSSSTAGFVMLGKLMK
TRGPRSGSATFQLQALQIVCSDTWAEEDKCCEVPALRDAETCPALTSACTCPSDQPGPPG
PPGPPGTPGRRGIQGEQGTPGPRGEPGPPGQTGPEGPGGQQGSPGTQGLTVQGPVGPPGV
KGEKGDIGHPGLQGHPGHQGPPGRHGLQGPKGMRGFEGTAGFPGPPGPRGFQGIAGARGI
NGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQACEQLIQTHVLKFDPFLHEN
TRPPVPVWEEEVKSGEPGLPGLASLPGQKGDRGEDGFPGDPGREGYLGGLGAKGQKNSPV
LSVQRSPGLQGTTDQSGEDLLEKLGSQGSPGPGSPSRFSGVAVQAGKSGPSGDCESSECL
LKSPRDVDLIP
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcgcccagtaaccttcggaagaaggcggcggagcggcagtaccgggcggag
gtgatgctggcgggggagcagctgaggcttcgacttcatgatgggaagctcatcaaggat
cgacgttatcatcttcggacatatcccaactgttttgtggccaaggagctcacagattgg
ctgatagatcacaaggaggcacccgacagagaaacaggcattcggctgatgcagaaactg
atggaccactacatcattcatcacgtgtgtgatgagcactcagactacaaagatgccaaa
ctgctgtaccgcttccgcaaggacgatgggaccttccctttaaataaggatgtcaaggtg
tttcttcgaggccagagtctgtatgaagcgttggtgagtgcagatggttcaatccttaaa
gtacgggaggaaaagtctgtcaggtaccagcgagctttcatgggctgtgagatggtggac
tggctcactcaggagggagaggcagccagcaggaaggaggctgtggagctgtgtcggacc
ctcctggaacacgggatcattcaacatgtctctaccaagcaccacttctttgacagcaat
ctcctttaccagttccggatcaacttccgtaggcggcggcggctgacagagcttctgact
gacaacatccgagctgtccctgagagtcctgatagtcccttctgtcttcgaaagctcaac
cctgaccagggcaataccagcttcctttcagttcagcctaacaaggaaatcaaagtggtc
tcagctgttaggagaagcagtgtcaccagcctagcagggggagctggcccctactataac
agtccccctcttctggggctcccaccaggctctgagtgcaaccctaagtcagtgctgaag
agacaggtaaccagtgaggagctattgtccccaggagccccctatgtgaagaagactcta
acaattgtaggggatgctgtgggttgggggtttgtagtccgaggaggaagaccctgtcac
atccaggctgtggatcctggaggcccagctgctgctgcaggcatgaaggcccagagtgcc
atgacagcccagggatgcatctgcatctggctggtctgggcctcagtgttggacctcatc
catggacaaggacccaacctagggactagccgactgaggctgactgtgctatctgaagac
cggctgcagatgaagtggaaggaatcagaaggaaataccaatggctacaaagttcaagta
aagcccatggcaggggactctgaacaggaagtaatgctgactaccaagacacctaaagtc
actgtggttggactgagccccaccaaggaatacacactccaaatatttgcactcagtggc
tcccgtgacactctgatggccaggcggaggtttgtgattgaggatttgaagagcatctcc
atgggcaggaacagccggaagccatcaggggaaatcctggagcctattccctcttcagta
ggaaatcatgaatttgagcaggttcctgagcttggagcaacttcaccaacttggagtgga
gtctctcccactttaggtcctcagttccactgtgacacctccattcctgtggatatagta
ttcttggtggatgggtcctggagtattggccgaagtaactttaggctcatcagagaattc
ctggccaacatcatctctccttttcacattngcccagataaagtccgaataggtttgtcc
caatacagtggagatcccaggactgaatgggacctgaattcattcaacaccaaggatgaa
gttctagaggctgtgcgaaatctccgttacaagggtggtaacactttcacaggtcttgca
ctgactcacgtactagaacagaacctgaagcttgaagctgggtctcgctctgaggcagtt
aaagtggtgattcttctgaccgatggcaagtcacaggatgatgcccgacttgctgctcaa
gttatgaaagacctaggcatggacatctttgccattggagtgaagaatgctgatgagtct
gagctgacacacctggcctctctacccctggatgtcacagttcacaatgtccaggatttc
catctccttggcaacctgaccaaaagactcacccgactcctttgctggaagatccaagag
agaagccggagcacggacctaggtgtcccggctaacagatggcctcacacaagccctaca
aatctgattgtatcggaggtgacagccacagggctccgcctggcctggacccctcctcta
gagcctgccaggaagtacaggattgtatatcatccctccagaggtggcacacccatggag
gtcacagtggagggggctgcctcatctgcccagctgctgaatttgacctccaacacagag
tacttggttacagtgcttcctgtctataaggatggtgatggagaggggctccgggacatt
gtgactacattaccactgtctccaccaagctcactgaccattttcagcgtgacccacagt
agtatccacttgacttggcaacctgcaaataaagctacccagtacctgattcactgcact
tcatcagcttcccctagagagcagaaagtagaagaggaagaggaaggaggaaaagaggtg
agagtgggagatcctgaagttctgctggaaggtctggctcctggcacagaatatagcatt
gctgtgtatgctctctttggggaggaagtcagtgcaccccagagcatccgagtcaagacc
ttatccttggatctccccaaacacctgagcttctctgaggtcagccacagctctgttcga
gtccactgggaggcatcatcacgggtggtgcgcatgtaccacgtgtcctatgtctcactc
gaagggaaccaagctggggagatagatgtctccaggaatgcctcttctgtcaagctggcc
ccattatcctcctctacctcatatattgtcagtgtcacatcaatctacaaagaaggtgat
tcctccacactcactggaagagtgaccacacgaaaagttccagccccaagccacttaaaa
gtaaccgaactgccaggggatgatgtccggctggagtgggctgctgctgcagcttctggt
gtggtggtctatcagatcaaatggatgcccttgggtgaaggaaaagcttatgagatttct
gtcccagggaacctaggcactgccactttgcctggtctagggaagcatgcagaatatgag
atctccatcctagcctattacagagatggggcccgcagtgacacagtatccctcagatat
actccaatgagcaggaatccacccttgaaccttgtgctaacctcagagactcccagcagc
cttcggatcctctggacaccccctaatgacaacgttctgcactacagactcacctatgcc
ctggcctctggctctagccctgagaaaacaatcataattcccggcccagagaaccacgtg
acacttcctctcctgctccctgggaccaagtacaagattatggtttcagctgtgtacagg
ctaggggagagcaatgttgtgtctgccataggaaggactgcggcttgcccagctctccgt
gctaacggctctctgccaggatttgacatgatggaggcttttggcttggtggaaaaggag
tatgcatccatcaaaggggtctcgatggagccctctatcttcagtggaactcggacctat
acactcttcagggatgtccagttgatgcgtcgagccagtgaaatccatccagctgccctc
ccaccggagcacaccatcagctttctcctccgtgtgctcccagagacacctagggagccc
tttgcactgtggcagatcactgatgagaccttcgagccccttcttggagtcacccttgat
gctggcagaaagtccctgacctatttccatcgtgaccacaaggctgagttgcaagaagtc
acatttgatttgcaggaagtgaagaagatattttatgggagcttccacaaggtacatgtg
gcagtcagtcgcaccaaggtcaagctctatgttgattgtcggaaggtcacagagaggctg
atcagtgaggcagggagctcatcaactgcaggatttgtcatgttgggaaaactaatgaag
accaggggcccccggagtggctcagcaacttttcagctccaggccctgcagattgtttgc
agtgacacctgggcggaggaagacaaatgctgtgaggtacctgctctgagagatgcagaa
acctgccctgccctgacttctgcctgcacttgtccttcagatcagcctggtcctccaggg
cctccagggccccctggcaccccagggaggagaggcatccagggggagcaagggactcca
ggacctagaggagaaccaggtccacccggacagactggaccagagggccctggaggccag
caggggtcaccagggactcaaggtctcacagttcagggacctgtgggtccaccaggggtc
aaaggtgagaagggggacattggacatccaggcttacagggccaccctggccaccaagga
ccccctgggagacacggcctccaaggtccaaagggaatgaggggatttgaaggtacagct
ggctttccaggacctcctggcccaaggggctttcagggaatagctggtgccagaggcatc
aatggggagaagggaccccctggagacgtgggacccacgggacttcctgggcctaaagga
gagcgaggagagaagggagagccccagtccctcgccaccatttaccagttggtcagccag
gcttgtgagcagttgattcagactcatgtgttgaaatttgatccattccttcatgaaaac
accaggcccccagtgcctgtctgggaggaggaggtaaagtcaggagagccaggcttgcct
ggtcttgctagccttccgggccagaaaggagacagaggagaggatggattccctggagat
cctgggagagagggctacctaggtgggctgggagctaaggggcagaagaatagccctgtc
ctatcagtacaaaggtctcctggactccagggaacgacagaccaatcaggggaagatctt
ctggaaaaactgggatctcagggttctccaggaccaggtagcccctccaggttttcaggg
gttgcagtccaagctggaaagtctggcccttcaggggactgtgaatcctcagaatgtctc
ctaaagagtccaagagatgttgacttgatcccctga
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integrated database retrieval system