Phascolarctos cinereus (koala): 110205231
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Entry
110205231 CDS
T05867
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110205231 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110205231 (PRPF6)
Spliceosome [BR:
pcw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110205231 (PRPF6)
Complex C
U5 SnRNP specific factors
110205231 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
TPR_1
T7SS_EccA1_N
ARM_TT21_C
TPR_21
Motif
Other DBs
NCBI-GeneID:
110205231
NCBI-ProteinID:
XP_020837322
UniProt:
A0A6P5JSV9
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All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQDLCEEALKHYEDFPKLWMMKGQIEE
QEELTEKAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVKKR
CENAEPRHGELWCEVSKDIENWQKKIGEILVLVAAKIKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaaagaagccgttcctgggaatgcccgcgccccttggctacgtgccgggg
ctgggccgcggagccactggtttcaccacccggtcagatattggtcctgctcgtgatgcc
aatgacccagtggatgatcgacatgctccaccaggcaagaggactgtaggggaccagatg
aagaaaaaccaggctgcagatgatgatgatgaagatctgaatgacactaactatgatgag
tttaatggttatgctggaagtcttttctcaagtggtccttatgaaaaagatgatgaggaa
gcagatgctatttatgcagcattggacaagaggatggatgaaagaagaaaagaaaggagg
gaacagagggagaaagaagaaattgaaaaataccgtatggaacgtcctaaaattcagcag
cagttctcagatctgaaaagaaagttggcagaagttacagaagaagagtggctaagtatt
cctgaagttggtgatgctagaaacaaacgccagcggaatccacgatatgagaaacttacc
cctgttcctgacagtttctttgctaaacatttacagactggagagaaccacacttcagtg
gatcctcgacaaacacaatttggaggtcttaatacaccctacccaggaggattaaatact
ccatatccaggtggaatgacacctgggctaatgacacctggaacaggtgaattggacatg
aggaagattggccaagccaggaacaccttgatggatatgcgattgagccaggtgtctgat
tctgtgagtgggcagactgtggtggatcctaagggttatctcacagatttgaattctatg
attcctacacatggaggagatattaatgacattaaaaaggcccgtttacttctaaaatct
gtgagggagacaaatccccatcatcctccagcatggattgcttcagcgcgtttggaagaa
gtcactggaaaactgcaagtagctagaaacctcattatgaaagggacagaaatgtgtccc
aagagtgaagatgtgtggttggaagcagcccgtctacagcctggtgatacggccaaggcc
gtggttgcacaggctgttcgtcatcttccacagtctgtccggatttatatcagagcagca
gagctagaaacagacatccgagcaaagaagcgtgttcttaggaaagctcttgagcacgtt
ccaaactctgttcgcttgtggaaggcagctgtggagttggaagagccagaagatgctaga
ataatgctgagccgagctgtggaatgctgccccactagtgtggagctttggcttgctttg
gcaaggctggagacctatgagaatgcccgaaaggtcttaaacaaagcacgtgagaacatt
cccacagatcggcacatctggattactgcagcaaaactagaagaagccaatggaaatact
cagatggtggagaaaatcattgacagagccatcacatcacttagagcaaatggtgtagaa
atcaacagagaacaatggatccaggatgctgaagagtgtgataaagctgggagtgtggcc
acctgccaggctgttatgcgtgcagtcattggaattgggattgaggaagaagatagaaaa
cacacctggatggaggatgcagatagttgtgttgcccacaatgcattggagtgtgcccga
gccatttatgcctatgccttgcaagttttccctagcaagaagagtgtgtggttgcgagct
gcttactttgagaagaaccatgggaccagggaatcccttgaagcactcctgcagagagca
gtggcccactgcccgaaggctgaggtgctctggctcatgggtgctaagtccaagtggctg
gcgggagatgtgcctgctgcgagaagcatcttggccttggctttccaggccaaccccaac
agtgaagagatctggttggctgctgtgaaacttgagtcagagaacaatgaatatgagcga
gcaaggaggctgctggccaaggctcggagcagtgctcccactgcaagggtgttcatgaaa
tctgtgaagcttgagtgggtgctgggaaacattgcagctgctcaggatctctgtgaagaa
gccttgaagcactatgaagattttcccaaactgtggatgatgaaagggcagattgaggag
caggaggagctgactgaaaaagcccgggaagcctataaccaggggttgaagaagtgtccc
cactctacacccctatggcttttactttcaagactggaggagaaagttggacagctaacc
agagcaagagccattttggagaaatctcgtttgaagaatccaaagaaccctgatttgtgg
ttagaatctgtgagattagaataccgagctggactgaagaacattgctaatacactcatg
gcaaaggcgctgcaggaatgtcccaactcaggcatcctgtggtcagaagcgattttcctt
gaggcaagaccccagaggaagaccaagagtgtagatgccctgaagaagtgcgaacatgac
ccccatgtcctgctagctgtggctaaactgttctggagtgaacggaagatcacgaaggcc
agggagtggttccaccgaacagtgaagattgattcagatctgggggatgcatgggctttc
ttctacaaatttgaattacagcatggtacagaggagcagcaggaagaggtcaagaagcgc
tgcgagaatgcggagccccgccatggggagctgtggtgtgaagtgtccaaggacattgag
aattggcagaaaaagattggggagatccttgtgcttgtagcagccaagattaaaaacacc
ttctag
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