KEGG   Phascolarctos cinereus (koala): 110205231
Entry
110205231         CDS       T05867                                 
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110205231 (PRPF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcw03041]
    110205231 (PRPF6)
Spliceosome [BR:pcw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110205231 (PRPF6)
 Complex C
   U5 SnRNP specific factors
    110205231 (PRPF6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N TPR_16 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_17 TPR_2 TPR_8 ARM_TT21_2nd FAT TPR_CcmH_CycH TPR_1 T7SS_EccA1_N ARM_TT21_C TPR_21
Other DBs
NCBI-GeneID: 110205231
NCBI-ProteinID: XP_020837322
UniProt: A0A6P5JSV9
LinkDB
Position
Unknown
AA seq 941 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQDLCEEALKHYEDFPKLWMMKGQIEE
QEELTEKAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVKKR
CENAEPRHGELWCEVSKDIENWQKKIGEILVLVAAKIKNTF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacaagaaaaagaagccgttcctgggaatgcccgcgccccttggctacgtgccgggg
ctgggccgcggagccactggtttcaccacccggtcagatattggtcctgctcgtgatgcc
aatgacccagtggatgatcgacatgctccaccaggcaagaggactgtaggggaccagatg
aagaaaaaccaggctgcagatgatgatgatgaagatctgaatgacactaactatgatgag
tttaatggttatgctggaagtcttttctcaagtggtccttatgaaaaagatgatgaggaa
gcagatgctatttatgcagcattggacaagaggatggatgaaagaagaaaagaaaggagg
gaacagagggagaaagaagaaattgaaaaataccgtatggaacgtcctaaaattcagcag
cagttctcagatctgaaaagaaagttggcagaagttacagaagaagagtggctaagtatt
cctgaagttggtgatgctagaaacaaacgccagcggaatccacgatatgagaaacttacc
cctgttcctgacagtttctttgctaaacatttacagactggagagaaccacacttcagtg
gatcctcgacaaacacaatttggaggtcttaatacaccctacccaggaggattaaatact
ccatatccaggtggaatgacacctgggctaatgacacctggaacaggtgaattggacatg
aggaagattggccaagccaggaacaccttgatggatatgcgattgagccaggtgtctgat
tctgtgagtgggcagactgtggtggatcctaagggttatctcacagatttgaattctatg
attcctacacatggaggagatattaatgacattaaaaaggcccgtttacttctaaaatct
gtgagggagacaaatccccatcatcctccagcatggattgcttcagcgcgtttggaagaa
gtcactggaaaactgcaagtagctagaaacctcattatgaaagggacagaaatgtgtccc
aagagtgaagatgtgtggttggaagcagcccgtctacagcctggtgatacggccaaggcc
gtggttgcacaggctgttcgtcatcttccacagtctgtccggatttatatcagagcagca
gagctagaaacagacatccgagcaaagaagcgtgttcttaggaaagctcttgagcacgtt
ccaaactctgttcgcttgtggaaggcagctgtggagttggaagagccagaagatgctaga
ataatgctgagccgagctgtggaatgctgccccactagtgtggagctttggcttgctttg
gcaaggctggagacctatgagaatgcccgaaaggtcttaaacaaagcacgtgagaacatt
cccacagatcggcacatctggattactgcagcaaaactagaagaagccaatggaaatact
cagatggtggagaaaatcattgacagagccatcacatcacttagagcaaatggtgtagaa
atcaacagagaacaatggatccaggatgctgaagagtgtgataaagctgggagtgtggcc
acctgccaggctgttatgcgtgcagtcattggaattgggattgaggaagaagatagaaaa
cacacctggatggaggatgcagatagttgtgttgcccacaatgcattggagtgtgcccga
gccatttatgcctatgccttgcaagttttccctagcaagaagagtgtgtggttgcgagct
gcttactttgagaagaaccatgggaccagggaatcccttgaagcactcctgcagagagca
gtggcccactgcccgaaggctgaggtgctctggctcatgggtgctaagtccaagtggctg
gcgggagatgtgcctgctgcgagaagcatcttggccttggctttccaggccaaccccaac
agtgaagagatctggttggctgctgtgaaacttgagtcagagaacaatgaatatgagcga
gcaaggaggctgctggccaaggctcggagcagtgctcccactgcaagggtgttcatgaaa
tctgtgaagcttgagtgggtgctgggaaacattgcagctgctcaggatctctgtgaagaa
gccttgaagcactatgaagattttcccaaactgtggatgatgaaagggcagattgaggag
caggaggagctgactgaaaaagcccgggaagcctataaccaggggttgaagaagtgtccc
cactctacacccctatggcttttactttcaagactggaggagaaagttggacagctaacc
agagcaagagccattttggagaaatctcgtttgaagaatccaaagaaccctgatttgtgg
ttagaatctgtgagattagaataccgagctggactgaagaacattgctaatacactcatg
gcaaaggcgctgcaggaatgtcccaactcaggcatcctgtggtcagaagcgattttcctt
gaggcaagaccccagaggaagaccaagagtgtagatgccctgaagaagtgcgaacatgac
ccccatgtcctgctagctgtggctaaactgttctggagtgaacggaagatcacgaaggcc
agggagtggttccaccgaacagtgaagattgattcagatctgggggatgcatgggctttc
ttctacaaatttgaattacagcatggtacagaggagcagcaggaagaggtcaagaagcgc
tgcgagaatgcggagccccgccatggggagctgtggtgtgaagtgtccaaggacattgag
aattggcagaaaaagattggggagatccttgtgcttgtagcagccaagattaaaaacacc
ttctag

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