Phascolarctos cinereus (koala): 110205247
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Entry
110205247 CDS
T05867
Symbol
CACNA1B
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04010
MAPK signaling pathway
pcw04020
Calcium signaling pathway
pcw04721
Synaptic vesicle cycle
pcw04723
Retrograde endocannabinoid signaling
pcw04725
Cholinergic synapse
pcw04726
Serotonergic synapse
pcw04727
GABAergic synapse
pcw04728
Dopaminergic synapse
pcw04930
Type II diabetes mellitus
pcw05016
Huntington disease
pcw05020
Prion disease
pcw05022
Pathways of neurodegeneration - multiple diseases
pcw05032
Morphine addiction
pcw05033
Nicotine addiction
pcw05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110205247 (CACNA1B)
04020 Calcium signaling pathway
110205247 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110205247 (CACNA1B)
04725 Cholinergic synapse
110205247 (CACNA1B)
04728 Dopaminergic synapse
110205247 (CACNA1B)
04726 Serotonergic synapse
110205247 (CACNA1B)
04723 Retrograde endocannabinoid signaling
110205247 (CACNA1B)
04721 Synaptic vesicle cycle
110205247 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
110205247 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
110205247 (CACNA1B)
05020 Prion disease
110205247 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
110205247 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
110205247 (CACNA1B)
05033 Nicotine addiction
110205247 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
110205247 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcw04040
]
110205247 (CACNA1B)
Ion channels [BR:
pcw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110205247 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
110205247
NCBI-ProteinID:
XP_020837346
UniProt:
A0A6P5JXL3
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MVRFGDELPGRYGGAGPAGGGRGGGGAGAGPGGLQPGQRVLYKQSIAQRARTMALYNPIP
VKQNCFTVNRSLFIFSEDNVVRRYAKRVTEWPPFEYMILATIIANCIVLALEQHLPDGDK
TPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAG
TEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLE
FYMGKFHKACFPNSTDPHTDPVGDFPCGTDASARQCENGYVCREYWRGPNFGITNFDNIL
FAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNADEKSPLDVLKRAAT
KKSKNDLIHAEEGDDRFADLCSVGSPFARASLKSGKNDSSSYFRRKEKMFRFFIRRMVKA
QTFYWIVLCVVALNTLCVAMVHYHQPQRLTNALYFAEFVFLGLFLTEMSLKMYGLGPRNY
FHSSFNCFDFGVIVGSIFEVIWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFRDETPNTNFDTFPAAILTVFQILT
GEDWNVVMYHGIESQGGVSKGMFSSFYFIILTLFGNYTLLNVFLAIAVDNLANAQELTKD
EEELEEAANQKLALQKAKEVAEVSPLSAANISIAAKQQNSAKTRSVWEQRTSQIRLHNFQ
ASCEALYSEMDPEERLRYTTTRHIRPDMKTHLDRPLVVEPRREEGIRAPGGKAGAGEGLE
ATEQTKVSPSTAAEGPEIPRKHHRHREKEKEKEKEKAGAGEQEKVEGVREENGESGVANK
EERHRQRRSRSKETGGNKEGKCERSRGQEGGRRHHRRGSVEDVITEKEHRRHRAHRHSAE
PPGKEGNGTVSGAKPERRARHRGGSRSGTREGEPGPKGENGEDPPRRHKTRHKALSMYDS
VEKEPGEKDGEPVEKELRNHQPKENQCEAEASGGMVAIPIHTLPSTCLQKVSEQPEDADN
QKNVHRMTQPSLETLTIRIPVTLTAPGETTVVPMNNVDFEGKVEEKKDVEAGDVTRSGPR
PILPYSSMFCLSPTNLLRRACHYIVNMRYFEMVILGVIALSSIALAAEDPVQADSPRNNV
LKYMDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGKGKD
ISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQL
FKGKFFYCTDESKELQRDCRGQYLDYEKDEVEAQPRQWKKYDFHYDNVLWALLTLFTVST
GEGWPTVLKHSVDATYEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQG
DKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIAL
NTAVLMMKFYGAPYEYEMMLKGLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTV
LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVC
LLIAMLFFIYAIIGMQVFGNIALDDETNINRHNNFRTFLQALMLLFRSATGEAWHEIMLS
CLSNRPCDSETRLKDECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFIRVWAEYDPAACGRISYSDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPI
SNEDMTVHFTSTLMALIRTALDIKLAPAGMKQHQCDAELRKEISSVWANLPQKTLDLLVP
PHKPDEMTVGKVYAALMIFDFYKQNKNTRDQGHQPPTGPVSLFHTQGQPAVLRGARGFLK
QKSSTSLSNGGALPHPGSGIKESVSWGTQRTQDVCYETRMPLERGHSAEIPVGQPSKQVR
AVEMQEMALDVSSGEPQPGLESQGRAASMPRLAAEMQRSQARSPGSYLAPIPDTSPMKRS
ISTLAPQRPHGSHLYEYGLERVPAGQTQHHHHHRCHRRRDKKQKSLDKCPSQSADGDGAP
NHSVGMAAPSGEGPAPCKHERKQERGRSQERKQLSSSSSEKQRFYSCDRFGSRDPSQPKS
SNGSRPTSPPGGQEPGPHRQGSGSVNGSPLLSTSGASTPGRGGRRQLPQTPLTPRPSITY
KTANSSPVHFTGFQTSLPTFSPGRLSRGLSEHNTLLQRDSLSQPPTPVSRIGSDPYLGHR
DHSDSSYRALPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHHLRRVPNGYHCSLGLSSG
PGTGSSRARQSYYHQADEDDWC
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtttcggggacgagctgcccgggcgctatggaggagcgggcccggcgggaggc
ggccggggtggtggtggggccggggccgggcccgggggcttgcagccgggccagcgcgtg
ctctacaaacagtccatcgcgcagcgggcccggactatggccctgtacaaccccatcccc
gtcaagcagaactgcttcactgtcaaccgttcactcttcatcttcagcgaggacaacgtc
gtccgcagatacgccaagcgcgtcacagaatggcctccctttgagtacatgatcctggcc
actatcattgccaattgtatcgtcttagctctggagcaacaccttcctgatggagacaag
actcccatgtctgagaggctggatgacacagagccctatttcatcgggatattttgtttt
gaagctgggatcaaaatcatcgccttgggcttcgttttccacaagggctcctacctgagg
aatggctggaatgtgatggatttcgtggtggtcctcacagggattttggccacagctggc
actgagtttgacctccgcaccctgagagctgtgagagtgttaagaccattgaagctggta
tcagggattccaagcctccaggttgtgctcaagtccatcatgaaagccatggtgcctctg
ctgcagattggcctcctgctcttctttgccatagtcatgtttgccatcatcggacttgag
ttttacatgggcaagttccacaaagcctgcttccccaatagcacagacccacatacagat
cctgtaggagacttcccctgcggcactgatgcctcagcccgacagtgtgagaatggctac
gtctgccgagaatactggcgtggacccaattttggcattaccaactttgacaacatcctg
tttgcaatcttgactgtgttccaatgtattacgatggagggctggacagatatcctctac
aatactaatgatgcagcaggaaatacctggaactggctttatttcatccctctcatcatc
attggatctttcttcatgctcaacctggttctgggagtgctttcaggggaatttgccaaa
gaaagagagagggtagaaaaccgccgggcctttctgaagctccgccggcagcaacagatt
gaacgggagcttaatggttacttggaatggatcttcaaggctgaggaggtcatgttggca
gaagaagacaagaacgcagatgagaagtcccctttggatgtgctgaagagagcagccacc
aagaagagtaaaaatgacctgatccatgcagaagagggggacgatcgcttcgcggacctt
tgttctgtgggttctccatttgcccgagctagtctgaagagtgggaagaatgacagctcc
tcctatttccggaggaaagagaagatgtttcgtttcttcatccgccgcatggtgaaagcc
cagaccttctactggatcgtcctctgtgttgtggcgttgaacacgctgtgtgtggccatg
gtacactatcaccagccccagaggctcaccaatgctctgtatttcgcagagtttgttttc
ctggggctcttcctcacagagatgtctctgaagatgtatggcctggggcccagaaattat
ttccattcctccttcaactgctttgactttggggtcatcgttggaagcatctttgaagtc
atctgggcagctatcaagccggggacttcatttggtatcagtgtgctgagggctctccgg
ctgctgaggattttcaaagtcacaaagtactggaattcccttcggaacctggtggtctcc
ctgctgaactccatgaaatccatcatcagcctgctcttccttctcttcctgttcattgtg
gtgttcgccctgctggggatgcagctctttggaggacagttcaattttagagatgagacc
ccaaacaccaactttgatacttttccggctgcaattctcactgtattccagatcctgaca
ggagaagactggaatgtggtgatgtatcatgggatcgaatcccaaggtggagtcagcaaa
ggaatgttctcttctttctattttatcatcttgacactatttggaaactacacccttctg
aatgtcttcctggctattgctgtggacaatcttgccaatgcccaggaactgaccaaggat
gaggaagaattggaggaagcagccaatcagaagcttgctttgcagaaggccaaggaggtc
gctgaagtcagccccctgtctgctgccaacatctccatagcagctaagcagcagaactca
gccaagaccaggtctgtgtgggaacagcgcacaagtcagatccgtctgcacaatttccag
gccagctgtgaggccctgtacagtgagatggaccctgaggagcgcctccgctataccacc
acccggcacatccgtccagacatgaagactcacctggatcgacccctggtggtggagccc
cgcagagaagaagggatccgggccccagggggcaaagcaggggctggggaggggttggag
gccacagagcaaaccaaggtgtcccccagcacggctgctgagggccctgagataccccgc
aagcaccaccggcacagggagaaggaaaaggagaaagaaaaagaaaaggcaggggctggg
gagcaggagaaggtggaaggtgtcagggaggaaaatggggagtcgggcgttgccaataaa
gaggaacgacaccggcagcggaggagcagaagcaaggagactgggggcaacaaagagggg
aaatgcgaacgttcccggggccaggaaggtggccggaggcaccaccgccggggttctgtg
gaggatgtcataactgagaaggagcaccggcggcaccgtgcccaccggcactcggcagag
ccaccgggcaaagaaggcaatggcaccgttagtggggctaagcctgagcgtcgagcccgg
catcggggtggctcccgctcagggacccgggaaggagagcctggacccaagggagagaat
ggagaggatcctccccggagacataagaccaggcacaaagccctatccatgtatgattcg
gtggaaaaggaaccaggagagaaggatggggagcctgtggagaaggagttgcggaatcat
cagcccaaggaaaatcaatgtgaggcggaggccagtggtgggatggtggccatccccatt
catacactgcccagcacttgtctgcagaaggtgagcgagcagccagaggatgctgacaac
cagaagaatgtgcaccgcatgacccaaccttccctggagaccctcaccatacgcatccca
gtaaccctgactgcccctggagagaccaccgttgttccaatgaacaatgttgactttgaa
ggtaaagtggaagagaagaaggacgtggaggccggtgatgtgacaaggagtggaccccgt
ccaattctcccctacagctccatgttctgcttaagccccaccaacctgcttcggcgtgcc
tgccactacatagtgaatatgcgttactttgaaatggtcatccttggggtcatcgccctc
agcagcattgctctagcagcggaggatccagtacaggccgactcacccaggaacaacgtt
ctcaagtacatggattacatttttactggggtcttcaccttcgagatggtaatcaagatg
attgacctgggtctgctgcttcatcctggctcttatttccgtgacctgtggaacattctg
gacttcattgtggtcagtggggccctggtagcttttgccttctcaggaaaagggaaagac
atcagcacgatcaagtctctgcgagtgctccgagtcctgaggcctctgaagaccatcaaa
cgcttgccaaaactaaaggctgtgtttgactgtgtggtaaattccctgaagaatgtcctc
aatatcctcattgtctacatgctcttcatgttcatctttgccgtcattgctgtgcagctc
ttcaaaggaaaattcttctattgcacggatgaatccaaagagctgcagagggattgcagg
ggtcagtatttggattatgaaaaggacgaagtggaggctcaacccaggcaatggaagaaa
tacgactttcactatgacaatgtgctctgggccttactgactcttttcacggtgtctaca
ggagaagggtggccaacggtactgaaacattcagtggatgccacatatgaagagcagggc
ccaagccctggcttccggatggagctgtccatcttctatgtggtctactttgttgtgttt
ccctttttcttcgtcaatatctttgtggcattgatcatcatcaccttccaggagcaggga
gacaaagtgatgtcagaatgcagtctggagaagaatgagagggcttgcatagactttgcc
atcagtgccaagcccctgacccgttacatgcctcagaacaagcagtccttccagtacaag
acgtggacgtttgtggtgtccccgccctttgagtatttcatcatggccatgattgccctc
aacacggctgtcttgatgatgaagttctatggtgccccctatgagtatgaaatgatgctg
aagggcttgaatatcgtatttacttcgatgttctccatggagtgtgtgctgaagatcatc
gcctttggggtgctgaattatttcagagatgcctggaatgtttttgattttgtaacagta
ttgggaagtattactgatattttagtaacagagattgcggaaacgaacaacttcatcaac
ctcagcttcttgcggctcttccgggcagcccgactcatcaagctacttcgccagggctac
actatccgaattctcctgtggaccttcgttcagtccttcaaggctctgccatatgtctgc
ttactgattgccatgctattcttcatctatgccatcatcggcatgcaggtctttggaaac
attgctcttgatgatgaaactaatatcaatcggcataacaacttccggacattcctacaa
gccttgatgttgctgttcaggagtgccacaggagaagcctggcatgagatcatgttgtcg
tgtctcagcaaccgtccctgtgactccgagaccagattaaaagatgaatgtgggagtgac
tttgcttatttttacttcgtctccttcatcttcctctgttcttttctgatgctgaatctc
tttgtggctgtgattatggataattttgagtacctgactcgagactcttccatcttaggg
cctcaccacctggacgaatttattcgggtctgggctgaatatgacccagctgcatgtggg
cgcatcagttacagtgacatgtttgagatgctgaaacacatgtccccacccctcggcctg
ggaaagaaatgccctgctcgagttgcctataagcgcttggtacgaatgaacatgcccatt
tccaatgaggacatgactgtgcacttcacttccaccttgatggccctcatccggactgct
ctggacatcaaacttgcaccagctgggatgaaacagcatcagtgtgatgcagaactgagg
aaagagatttcatctgtttgggctaatctgccccagaagactctggacttgttggtgcca
ccacataaacctgatgagatgactgttggaaaagtctacgcagctctgatgatttttgac
ttctacaagcagaataaaaacaccagagaccaaggtcaccagcctccgacaggtcctgtg
tctctgttccacacccaaggccaacctgctgtgctacgaggtgctagaggattcttaaaa
cagaagagttcaacctccctcagcaatggtggagccctaccacacccagggagtggcatc
aaagaatctgtctcatggggcacccagcgtacccaagatgtctgctatgagaccagaatg
cccctagagcgtggtcattctgcagaaattcctgtgggacaacccagcaaacaagtgagg
gctgtagagatgcaagagatggccctggatgtttccagtggtgagccccagcctggactg
gagagccagggccgagcagcctccatgccccgcctggccgcagagatgcagaggagccaa
gcgcgatcgcctgggagttacctagcacccattccagacacaagccccatgaagcgctct
atctccaccctggccccacagcgcccacatggctcacacctttatgaatatggcctagaa
cgtgtgcctgcaggccagactcaacatcaccaccatcatcgctgtcaccggcgcagggat
aagaagcagaagtctttggacaaatgtcctagtcagtcagcagatggagatggggcacca
aaccacagtgtggggatggcagctccatcaggggaaggtccagctccttgtaagcatgaa
aggaagcaagaaagggggcggtcccaggagcggaagcagctctcttcctcctcttcagag
aagcaacgtttctactcttgtgaccgatttgggagccgggacccatcacagcccaaatcc
tctaatgggagtcgtcccacatcacctcctggggggcaggaaccaggtccccatagacag
ggtagtggttcagttaatgggagccccttgctgtcaacatctggtgctagtacaccgggc
cgtggtgggaggaggcagctcccccagacacctctgaccccccgtcccagcatcacatac
aagactgcgaactcctcgcctgtccacttcaccggtttccagaccagcctacccaccttc
tccccgggacggctcagtcgaggcctttctgagcacaacaccctgctccagagggattct
ctgagccagccgccaaccccagtgtctcggattggctctgacccctatctggggcaccgt
gaccacagtgattcttcttaccgggccctgccagaggacacgctcacttttgaggaagcc
gttgccaccaactcgggccgctcatcgaggacttcctatgtgtcctctctgacatcccag
tcccatcatctccgtcgtgtgcccaatggttaccactgcagtctggggctgagctccggc
ccagggaccggcagcagcagggcccggcagagttattatcaccaagccgatgaagacgac
tggtgctag
DBGET
integrated database retrieval system
