Phascolarctos cinereus (koala): 110206082
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Entry
110206082 CDS
T05867
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110206082 (SRRM1)
03015 mRNA surveillance pathway
110206082 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110206082 (SRRM1)
03041 Spliceosome [BR:
pcw03041
]
110206082 (SRRM1)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110206082 (SRRM1)
Spliceosome [BR:
pcw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110206082 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
110206082
NCBI-ProteinID:
XP_020838776
UniProt:
A0A6P5K1G0
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRASPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEEIPELPEPSVKAKEPSIQEATS
TSDILKAPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRTRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRISSPPRKTRRLSPSSSPPRRRHRPSPPASPPPKTRRSPTPQQS
NRTRKSRGSVSPGRTSGKATKHKGTEKRESPSPAPKPRKVELSESEEDKGGRMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSNVKNGEVGRRRRHSASRSASPSPRKRQKES
SPRMQMGKRWQSPMIKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPPPPRRRTPS
PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPAKRRVSHSPPPKP
RSSPVTKRRSPSLSSKHRKGSPPSRSTRETRSPLPNKRHSPSPRPRLPHTSASPPPLRRG
ASSSPQRRQSPSPSTRPIRRVSRTPEPRKAKKAASPSPQSVRRVSSSRSASRSPEPAAKK
HQAPPSPTQSQSPSTNWSPAAPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDK
KHKKHKKHKKEKAAAAAAAAAAVASTTTSAQEEPEAETEPKKETESEAEDNLDDLEKHLR
EKALRSMRKAQVSPQS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggacaatcgtttcagcaataag
cagaagaagctactaaagcagttgaagtttgcagaatgtctagaaaaaaaggtagacatg
ggcaaagtaaatttggaggtgattaagccttggattacaaaacgagtaacagaaattctt
ggatttgaggatgatgtagtaattgaattcatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcagattaacctgactgggttcttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgttgttgagcgcacaggaaaacattgctgggatccct
tctgctttcttggaactgaagaaggaggagataaaacaaagacagattgaacaagaaaaa
ctggcatctatgaagaaacaagatgaagacaaagataaaagggacaaagaagaaaaggag
agcagcagagaaaaaagggagcgatccagaagccctagaagacgcaagtccagatctcct
tcccctagaagacgagcctctcctgtcaggcgagagagaaagcgaagtcattctcgatct
ccccgtcacagaaccaagagccgaagcccctcccctgctccagaaaagaaagaagagatc
ccagaacttccagaaccttcagtgaaggccaaggaaccttcaatacaagaggcaacctct
actagtgatattctgaaagctcccaaacctgaacctataccagaaccgaaggaaccttca
ccagaaaaaaattcaaaaaaggaaaaagaaaaggagaaaacccgcccaaggtctcgatca
cgatccaaatcgaggtcacgaacacgttctcggtccccttctcatactcgacctagacgg
cgtcatagaacacgttcaaggtcatattcaccaagaagacgacccagtccaagaaggcgg
ccatcccctcgaagaagaacccccccaagacgaatgcctcctccaccaaggcatagaaga
agtcgatctcctgtgagacgaaggcggcgatcgtcagcgtctctgtctggcagcagctca
tcgtcatcttcatcccgttcccggtcacctccaaagaagccacccaaaagaatctccagc
ccccctagaaaaacacgtcgactctctccatcctcaagccctccccggcgaagacatcgg
ccgtctccgcccgcaagcccaccgccaaaaacccgtcggtcaccaacaccccagcagtca
aatcgtacgagaaaaagtcgtggctcggtttctccagggagaacctcaggtaaagcaaca
aaacataaaggtaccgagaaaagggagtcaccttcaccagcaccaaaacctcggaaagta
gagttatctgaatcggaagaagacaaaggtggcagaatggcagcagctgattccgtgcag
caaaggcggcagtaccggagacagaaccagcagtcttcttctgactctggctcctcctcc
tcctcagaagatgaacgaccgaagagatcaaacgtgaaaaatggagaagtgggaaggcgt
cgacgccattcggcctcccggagcgcgtccccatcaccacggaaacgccagaaagagtcc
tctcctcggatgcagatgggaaagagatggcaatcgccaatgattaaaagtagtaggcgg
agaagaagtccttcaccaccaccagccagacgacggcgctccccttctcctgcccctccc
ccccggcggcggcggtctcctacaccaccgccaccgccaccacggcgcaggactccttct
cctcccccacgtcgacgctcaccttctccaagaagatactctcccccaatccagagaaga
tattctccttccccacctcccaagagaagaacagcttccccaccaccacctcccaaacga
agggcatcgccttcgcctcccgcaaagagacgggtctcccattcaccacctccgaagcca
agaagttcccctgttacaaagagacgttccccttccttatcatctaagcataggaaaggg
tcccctcctagccgatccacccgagaaacccggtctcctctaccaaacaaacggcattca
ccttcaccacggcctcgacttcctcatacctctgcaagtcctcccccactccgaagaggg
gcttcatcttcaccccaaagaaggcagtccccatcaccaagcactaggcctatcaggaga
gtctccagaaccccggaacccagaaaagcaaaaaaggctgcctcaccaagtccccagtct
gtaagaagggtctcatcctccagatctgcctccagatctcctgagccagcagctaagaaa
caccaagcacctccgtcccccacccagtctcagtccccatccacaaactggtcgccagca
gcacctgtcaagaaggccaaaagccccacgccaagcccatcccctgccaggaattcagac
caggagggtggtgggaagaaaaagaagaagaagaaggacaagaaacacaaaaaggacaag
aagcacaaaaaacacaaaaaacataagaaggagaaggcagccgccgctgctgccgccgct
gctgccgtggcgtctaccaccacatcagcccaggaagagcctgaagcagagacagagccc
aaaaaggagaccgagagtgaggctgaggacaacctggatgacctagagaaacaccttcgg
gaaaaggcactgaggtcgatgagaaaggcgcaagtgtccccacagtcctag
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