Phascolarctos cinereus (koala): 110206133
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Entry
110206133 CDS
T05867
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03082
ATP-dependent chromatin remodeling
pcw04714
Thermogenesis
pcw05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110206133 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110206133 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110206133 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcw03000
]
110206133 (ARID1A)
03021 Transcription machinery [BR:
pcw03021
]
110206133 (ARID1A)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110206133 (ARID1A)
Transcription factors [BR:
pcw03000
]
Eukaryotic type
Helix-turn-helix
ARID
110206133 (ARID1A)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110206133 (ARID1A)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110206133 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110206133
NCBI-ProteinID:
XP_020838864
UniProt:
A0A6P5K159
LinkDB
All DBs
Position
Unknown
AA seq
2298 aa
AA seq
DB search
MAAQVAPATASSLGNPPPPPPPSELKKAEQQQQQREEAGGEAAAAAEQQRGEMKAAAGGP
ESEGPAGGPPPPLGKELQDGAESNGGGGGGAGAEPDLKNSNGNAGPRPALNNNLPEPPGG
GGGGGGSGSSDGVGAPPPPPPHSAAAAAALPPPAYGFGQAYGRSPSAVAAAAAVAAAVFH
QHGGQQSPGLAALQSGGGGGGGGLEPYAGPPQNSHGDHGFPNHQYNSYYPNRSAYPPPPQ
AYALGSPRGGAPGPASAAAGSKPPPASSASASAAAAAAAAAAASFPPQRFGAMGGGGPAA
AGGGTPQPTATPTLNQLLTSPSSARGYPGYPGSDYGGGGPQDGGTGKGPADLASQYAGSG
QAWGSAASGAGQQRSHHAPMSPGSSSGGAGQPLTRTPQPSSPMDQMGKMRPQPYGGSNPY
SQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSTMGSLSYAQQIPPYGQQGPSG
YGQQGQSPYYNQQSPHPQQPPYSQAPPSQTPHAQPSYPQQPQSQPPQLQASQPPYSQQPS
QPSHQQSPSPYPQQQSTAQQHPQSQPPYSQQQAQSPYQQQPPQQTASAALSQQSAYPQSQ
AQQPQQTAYSQQRFPPPQELSQDSFGSQASSAPSMASSKGGQEDMNLSLQSRPSSLPDLS
GSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSP
ASVAQSRSGPLSPAAVPGTQMPPRPPSGQSDGIMHPSMNQSSIAQDRGYMQRNPQMPQYS
SPQPGSALSPRQSSGQMHAGMGSYQNSMGSYGPQGGQYGPQGGYPRQPNYNTLPNANYAS
AGMAGSMNPMGAGAQMHGQTGMPPYSGLPPGRMSHASMGSRPYGPNMANMPPQVGSGMCP
PPGGMNRKAQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGLNSMAGMINPQG
PPYPMGGNIANNSGGMAASPEMMGLGEVKLTPATKMNNKADGTPKPESKSKKSSSSTTTN
EKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLT
QVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKK
SQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVG
IQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGNDPFV
SSGQGPNSGMGDPYNRATGPGLGNMAMGQRQHYPYGGPYDRVRAEPGLGPEGNMGPGAPQ
PNLMPSNPDSGMYSPSRYPPQQQQQQQPQQQQQQQRHDSYGNQFSTQGTPSSSPFPSQQT
TVYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYGSGQGQPPQQQLPPAQPQPASQQQPA
QPSPQQDVYNQYGNAYPAAGADRRPAGGPQNQFPFQFGRDRVSAPPGSNAQQSMPPQMMG
GPMQPTTEGPQQGTMWQGRNDVGYNYPNRQNTGSAPQGPAYHGVNRTDEMLHTDQRVNHE
GPWPSHGTRQPPYGPSAPVPPMTRPPQSNYQPPPSMQNHIPQVSSPAPLPRPLENRTSPS
KSPFLHSGMKMQKAGPPVPASHIAPAPVQPPLIRRDITFPPGSVEATQPVLKPRRRLTTK
DIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLGQLPGLLELLVEYFRR
CLIEIFGILKEYEVGDPGQRTLLDPERFKKASSPSPVEGEEEEELLSPKMEEEEEEEEEE
AAFAGKDKVLSESSEEKLVSKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIG
GGDTTEHIQTHFESKMELPGSQAREPAPVAPPKRIPAAEGAPGVRDREGPLPDGPSEKRI
TATMDDMLSSRPSTLSDEGAKNAETTKESGKFPFGINPVQSHRNIKILEDEPHSKDETPL
CTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQA
PLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDG
LLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKL
YSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQ
FQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLM
NSLVSQVICDVLFLIGQS
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccaccgctagcagcctgggcaacccgccgccgccgccg
ccgccctcggagctgaagaaagcggagcagcagcagcagcagcgagaggaggcggggggc
gaggcggcggcggcggcggagcagcagcgcggggagatgaaggcagcggccggcggcccg
gaaagcgagggccccgccggggggccgccgccgccgctcggcaaggagctccaggacggg
gccgagagcaacgggggcggcggcggcggggccggcgcggagccggacctcaagaactcc
aacgggaacgcggggcccaggcccgccctgaacaataacctcccggagccgcccggcggc
ggcggtggcggcggcggcagcggcagcagcgacggggtgggggcgccgccgccgccgcct
cctcactcggccgctgccgcggccgccctgccgcccccagcttacggcttcgggcaggcg
tacggccggagcccgtcggccgtggccgccgccgccgccgtggccgccgctgtcttccac
caacatggcggacaacaaagccctggcctggcagcgctgcagagcggcggcggaggcggc
ggcggcggcctggagccctacgcggggcccccgcagaactcgcacggcgaccacggcttc
cccaaccaccagtacaactcctactaccccaaccgcagcgcctacccgccgcccccccag
gcctacgcgctgggctccccgagaggcggcgccccgggcccggcctcggcggccgccggc
tccaagccgccccccgcgtccagcgcctcggcctcggcagccgccgccgccgccgccgcc
gccgcagcgtcctttcctccgcagcgcttcggggctatgggtggaggaggccccgcggcg
gccggagggggcactccgcagcccacggccacccccaccctcaaccagctgctcacgtcg
cccagctcggcgcggggctacccgggctaccccggcagcgactacggcgggggcgggccc
caggacgggggcaccggcaagggccccgcagacttggcctcgcagtacgcaggcagcggc
caggcctgggggtcggccgcctcgggagccggccaacaaaggagccaccacgcgcccatg
agccccgggagcagcagcggcggcgccgggcagccgctcacccggaccccgcagccatcc
agtccaatggatcaaatgggcaagatgagacctcagccatatggtggcagtaacccatac
tcacagcaacagggacctccatcaggaccacagcaaggacatggatacccaggacagcca
tatggatcccagactcctcagcggtaccccatgaccatgcaaggccgggcacagagtaca
atgggcagcctctcttatgcacagcagattcctccgtatggtcagcaaggtcccagcggg
tatggccagcagggccagagtccatattacaaccagcaaagtcctcatccacagcagccg
ccctattcccaggccccaccatctcagactcctcatgcccagccttcctatccacagcag
cctcagtcccagccaccgcagctccaggcatcccagcctccttactctcagcagccatcc
cagccttctcatcagcagtccccatctccatacccccagcagcagtcaacagcacaacag
cacccccaaagccagcccccctactcccaacagcaggcacagtcaccctaccagcagcag
ccacctcagcagacagcctctgcagctctctctcagcagtctgcataccctcagtcccag
gcacagcagccacaacaaactgcctattcccagcagcgcttccctcctccccaggaatta
tctcaagactcattcgggtctcaggcatcctcagccccttcaatggcttccagtaaagga
gggcaagaagatatgaacctgagtcttcagtcaagaccctctagcttaccagatctgtct
ggctcgatagacgatctccccatggggacggaaggagctctgagccctggcgtgagcact
tcagggatttccagcagccaaggagaacagagtaacccagctcagtctcctttctctcct
catacctcccctcatctgcctgggatccgaggaccgtccccctccccggtgggctctcct
gccagtgttgctcagtctcgctcaggaccactctcacctgctgcagtgccaggcacccag
atgccacctcggccgcccagtggccagtcagatggcatcatgcatccttccatgaaccag
tcaagcattgcccaggatcgaggctacatgcagagaaatcctcagatgccccagtacagc
tcccctcagcctggttctgccttatctccacgtcagtcttcaggacagatgcatgcaggc
atgggctcctatcagaactccatgggaagctatggaccccaggggggtcaatatggccct
caaggaggctaccccaggcagccaaactataacaccctgcccaatgccaactatgcaagt
gcagggatggcggggagcatgaaccccatgggggctggggctcagatgcacggccagacc
ggcatgccaccctacagcggcctccctccaggaaggatgagtcatgcctccatgggcagt
cggccttatggtcccaatatggccaacatgccgcctcaggttgggtcggggatgtgcccc
ccacctgggggcatgaaccggaaagcacaagaaaccgccgttgccatgcatgttgctgcc
aactccatccaaaacaggcctccgggatatcccaatatgaatcaagggggcatgatggga
actgggcctccttatgggcaaggacttaacagtatggctggcatgatcaaccctcagggt
cccccctatcccatgggtgggaacatagccaacaattcaggagggatggcagctagtcca
gagatgatgggtctcggggaagtcaaattaacgccagccaccaaaatgaacaacaaggca
gatggaacacctaaacccgagtccaaatccaagaagtccagttcctccaccaccaccaat
gagaagatcaccaagttgtacgaattagggggtgagcctgagaggaagatctgggtggac
cgctatcttgccttcacggaagagaaagcaatgggcatgaccaacctgcctgctgtgggc
aggaaacccttggacctctaccgcctctacgtatctgtgaaggagattggcggattgact
caggtcaataagaacaagaagtggcgtgagctggccaccaacctcaacgtgggcacctcc
agtagcgctgccagctccctgaagaagcagtacatccagtgtctctatgcgtttgagtgc
aagattgagcggggagaagaccctcctccggatatctttgcagccgcagattccaagaag
tcccagcccaagatccagccgccatcaccagcggggtcagggtccatgcaggggccacaa
acccctcagtcaaccagcagttccatggcagaaggaggagatttgaagccaccaactcca
gcatccacccctcatagtcagatgccccctttgccaggcatcaggagcaactctgtgggg
attcaggatgcctttgctgatggaagcgaccccacgttccaaaagcgaaattccatgact
ccaaaccctgggtaccagcccagcatgaatacctctgacatgatggggcgcatgtcttat
gagccaaataaggatccttacggcagcatgaggaaagctccaggaaatgatcctttcgtg
tcctcagggcagggccccaacagtgggatgggggacccctacaaccgtgccacaggccct
ggtttggggaatatggcaatgggacaaaggcaacattacccatatggaggcccttacgac
agagtgagggcggagcctggactagggcctgaggggaacatgggccccggggccccgcag
ccaaacctcatgccttccaacccagactcggggatgtactcacccagccgctaccccccg
cagcagcagcagcagcagcaaccgcagcagcagcagcagcagcaacgacacgattcctat
ggcaatcagttttccactcaaggcaccccttccagcagtccgttccccagccagcaaact
acagtgtaccaacagcagcagcagaattataagcggccaatggatggcacctatggtcct
ccagccaagcgacacgaaggggagatgtacagcgtgccgtacggtagcggacaaggccag
ccaccacagcagcagttgcccccggcccagccccagccagccagccagcagcagccagcc
cagccatctccccagcaggacgtgtacaaccaatatgggaacgcttatcccgctgctggt
gctgaccgccggccggcaggaggccctcagaaccaattcccattccagtttggccgagac
cgggtctcggcaccccctggctcaaatgcccagcagagcatgccaccccagatgatgggt
ggtcccatgcagccaactacagagggcccccaacagggcaccatgtggcaggggcgcaat
gatgtgggctacaactaccccaatcggcagaacacaggctctgccccccaggggcctgcc
taccatggggtgaatcgaacagatgaaatgctgcacacagatcagagggtcaatcacgag
ggcccgtggccttcccatggcacccgccagcctccatatggtccctcggcccctgtgccc
cccatgacaaggccccctcagtctaactatcagcccccgcccagcatgcagaatcacatt
cctcaggtatccagccccgccccccttccccggcccctggagaaccgcacgtcgcccagc
aagtctccgttcctgcactcggggatgaagatgcagaaagcaggtcctccagtgcctgcc
tcacacatagcacctgcccctgtgcagccccccctcatcaggcgggacattactttccct
cctggctccgtggaagccacacagcctgtgttgaaaccgaggaggcggctcacgacaaaa
gatattggaactccagaggcatggcgagtgatgatgtccctcaagtcggggctgttggca
gagagtacgtgggccttagacaccattaacatcttgttgtatgatgacaatagcatcatg
accttcaacttgggccagctgccaggactgttggagctcctcgtggaatatttccggcgt
tgtttgatcgagatcttcggcattctgaaggagtatgaggtgggtgacccaggtcagaga
acattgctagatccggagagattcaagaaggcctccagcccatccccagtggagggggag
gaagaggaggagcttctgagccccaagatggaggaggaggaggaggaggaagaggaggag
gctgcatttgcaggcaaggacaaggtgctctcggagagcagtgaggagaagcttgtcagc
aagtttgacaagctgcctgtcaaaattgtgcagaagaacgacccttttgtggtggactgc
tcggacaaactagggcgagtgcaggagtttgacagcggccttctgcactggcggatcggt
ggcggggacactactgagcacatccagacccactttgagagcaagatggagctgcctggg
agccaggcccgggagcccgcgcccgtggcccccccaaagcggattccagcagccgagggg
gccccaggcgtgagagacagggaggggcccctgcccgacggcccctcggagaagcggatc
actgccaccatggatgacatgttgtcatcgcggcccagcaccctgtctgacgagggggcc
aagaatgcagagaccaccaaggaaagtggcaagttcccttttggcatcaatcccgtgcag
agccaccggaatatcaagatcttggaagacgagccccacagtaaggatgagaccccactg
tgcaccctcctggactggcaggactccctcgccaagcgctgcgtctgcgtctccaacacc
atccggagcctgtcgttcgtgccgggcaacgactttgagatgtccaaacacccggggctg
ctgctgatcctcggcaagctcatcttgctgcaccacaagcacccggagcgcaagcaggcg
ccactgacctacgagaaggaggaggaacaggaccaaggggtgagctgcaacaaggtggag
tggtggtgggactgcctggagatgctccgtgagaacaccctggtcacgctcgccaacatc
tcagggcaactggacctgtccccataccccgagagcatctgtctgccggtgctggacgga
ctcctgcactgggcggtctgcccctcggccgaagcccaggaccccttccccaccttgggc
cccaacgccgtcctctccccccagagactggttctggaaaccctcagcaaactcagcatc
caagacaacaacgtggacctgatcctcgccacaccccccttcagccgcctggagaagctg
tacagcaccatggtgcgcttcctcagtgaccgaaagaacccggtgtgccgggaaatggcc
gtggtgctgctggccaacctggcccagggcgacagcctggccgcccgggccatcgccgtg
cagaagggcagcattggcaacttgctgggctttttggaggacagcctggctgccacgcag
ttccagcagagccaggccagccttctgcacatgcagaaccccccctttgagccgaccagc
gtggacatgatgcgccgggcggcccgggcgctgctcgccctggccaaggtggacgagaac
cactcagagttcacgttgtacgagtcacggctgctggacatctctgtgtcgccgttgatg
aactcattggtctcacaagtcatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
