Phascolarctos cinereus (koala): 110206222
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Entry
110206222 CDS
T05867
Symbol
YBX1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcw03000
]
110206222 (YBX1)
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110206222 (YBX1)
03041 Spliceosome [BR:
pcw03041
]
110206222 (YBX1)
Transcription factors [BR:
pcw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
110206222 (YBX1)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110206222 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
110206222 (YBX1)
Spliceosome [BR:
pcw03041
]
Common components
Common spliceosomal components
General mRNP proteins
110206222 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
110206222
NCBI-ProteinID:
XP_020839084
UniProt:
A0A6P5K1V5
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSTADTKPGITGSGGGSGGPGGLTSAAPAGGDKKVIATKVL
GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
QPQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
YRPRFRRGPPRQRQPREEGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKAAEPPAENTSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcaccgccgataccaagcccggcatcaccggcagcggcggagggagcggcggtcccggc
ggcctcacatcggcggcgcccgccggcggggacaagaaggtcatcgcaacgaaggttttg
ggaacagtaaaatggttcaatgtaagaaacggctatggtttcatcaacaggaatgacacc
aaggaagatgtatttgtacaccagactgccataaagaagaataaccccaggaagtacctt
cgcagtgtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcg
gaggcagctaatgtcacaggtcctggtggcgttccagttcaaggcagtaaatatgcagcc
gaccgtaaccattacagacgttatccacgtcgtaggggtcctccacggaactaccagcag
aattaccagaatagtgagagtggggaaaagaacgagggatcagagagtgctccagaaggc
cagccccaacaacgccgtccctaccgcaggcggcggttcccaccttactacatgcggaga
ccctatgggcgtcgaccacagtattccaaccctcctgtgcagggagaagtaatggagggt
gctgacaaccagggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggt
tatagaccacgattccgcaggggccctcctcgtcaaagacagcctagggaggaaggtaac
gaagaagacaaagagaaccaaggagatgagacccagggtcagcagccacctcaacgtcgg
tatcgccgtaacttcaattaccgacgcagacgcccagagaaccctaaaccacaagatggc
aaagagacaaaagcagccgaaccaccagctgagaatacgtccgctcccgaggctgagcag
ggcggggctgagtaa
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