Phascolarctos cinereus (koala): 110206402
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Entry
110206402 CDS
T05867
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110206402 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110206402 (TRIM54)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110206402 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
CoiA_N
UvrD_C
FlgN
GH123_cat
SpoIISA_toxin
COG2_C
DUF1421
DD_DDX21-DDX50
Zn_ribbon_FGT1_2
DUF349
DUF5799
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
110206402
NCBI-ProteinID:
XP_020839386
UniProt:
A0A6P5K3J3
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPNIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLGQKFETLCAVLEERKAELLQTLAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIKKVGDMAKVELAG
RPEPGYESMEQFSVNVEHVAEMLRTIDFQTGGSGEEEEEELVLEGEDVSAGAEEERQEAS
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctgggggatgcacacagcatggataacctg
gagaagcaactcatctgccccatctgcctagagatgttctccaagccagtggtgatcctg
ccctgccaacacaacctatgccgcaagtgtgccaatgacgtcttccaggcctcaaatcct
ctgtggcaatctcggggttcaaccacagtgtcctcaggggggcggttccgctgcccatcc
tgtaggcatgaggtcgttctggacagacatggtgtctatggactgcagcgcaacctgctg
gtggagaacatcattgacatttacaagcaggagtcttcccggcctctgcattcgaaggcg
gagcagcacctaatgtgtgaggagcatgaggaggagaagattaacatctattgcctgagc
tgcgaggtgcccacctgctccctctgcaaggtgtttggtgctcacaaggactgtgaggtg
gcaccactgcccaacatctacaaacgccagaagagcgagctgagcgatggtattgccatg
ctggtggctggaaatgaccgggtccaggcagtcattactcagatggaagaagtgtgccag
accattgaagacaacagtcgaaggcagaagcaactactgggacagaagtttgagacattg
tgtgcagtactggaagagaggaaagcagaactacttcagaccctggcccgggaacaggag
gagaagcttcagcgggttcgagggctcatccgtcaatatggagaccacttagaggcctca
tccaagcttgtggagtctgccattcagtccatggaggagccgcagatggctctctacctc
cagcaggccaaggagctgattaaaaaggttggggacatggcaaaggtggagttggctggg
cggccagaaccaggctatgaaagcatggaacagttctcagtgaatgtggaacatgtggct
gagatgctccggacaattgacttccagactgggggttctggggaggaagaagaagaggag
ttggtgctggaaggggaggatgtcagtgccggggctgaggaagagagacaggaggcttcg
gagggtctgcactga
DBGET
integrated database retrieval system
