Phascolarctos cinereus (koala): 110207201
Help
Entry
110207201 CDS
T05867
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110207201 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110207201 (DDX6)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110207201 (DDX6)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110207201 (DDX6)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110207201 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
110207201 (DDX6)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110207201 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
110207201
NCBI-ProteinID:
XP_020840458
UniProt:
A0A6P5K671
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcaaaatgggcag
ctgaggggccctgtgaagcccagtggtggccctggaggagggggcacacaaacacagcaa
cagatgaaccagctgaaaaataccaacacaatcaataatggcactcaacagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatttgagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttagctagggct
aaaaatggaactggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcctactagagaactagccctacaggtc
agtcaaatctgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccaca
ggaggaaccaacttacgtgatgacataatgaggcttgatgacacagtacatgtggtgatt
gcaacccctggaagaattctggatctcatcaagaaaggagtagcaaaggttgatcatgtc
cagatgatagtattggatgaggcagataagttgctgtcacaggattttgttcagataatg
gaagacattattctcacgctacctaaaaacaggcagattttactatattcagccactttc
cctcttagtgttcagaagttcatgaattcccatttgcaaaaaccttatgagattaacctg
atggaggagctaactctgaagggagtaacccagtactacgcatatgtaactgagcgccag
aaagtacactgcctcaacacacttttttcaaggctccagataaaccagtcaataattttc
tgcaactcctctcaacgtgttgaactattagctaagaagatttcccaactgggctattct
tgcttctacattcatgctaagatgaggcaggaacaccgaaatcgtgtattccatgatttc
cgaaatggcttatgccgtaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgtggtgataaatttcgactttccaaagctggcagagacctatctccat
cgtattggcagatcaggtcgctttggtcaccttggtttggccatcaatttgatcacatat
gatgatcgattcaatctcaaaagtattgaggagcaactgggaaccgaaattaaacccatc
ccaagcaacattgacaagagcctgtatgtggcagaataccacagtgagcctgtagaagat
gagaaaccttaa
DBGET
integrated database retrieval system
