Phascolarctos cinereus (koala): 110207413
Help
Entry
110207413 CDS
T05867
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110207413 (TDRD12)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110207413 (TDRD12)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110207413 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110207413
NCBI-ProteinID:
XP_020840697
UniProt:
A0A6P5K714
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MIEVFILKIEDPGCFWVIIKGCDAFLDHEMEYQKLNIEMNAFYNSEYKDVEKIKPLLLEE
GQACVVYCQELKCWCRAVIKSIMSSADHYLAECFLVDFAKYIPVKSKNIRVAIDAFMRLP
YRAKKFRLYCTKPVTLHIDFCEDNAEIIPAKKWDSAAIQYFQNILKAATHFEAKLCGMEE
DIFDVYLYITIKNEKVCVNDDLVAKNFACYVTPKEKKIDCPEKATPKNVESPPDKINPAL
ALWPMLLQENIPEKLEKGVILQHNGLSLDLSSKKVSEKIEKIYKEKECMYSKEINKITVA
TAAYCPRKGGITIYAEPDVHAESSCQKLNEKQFKLTSKKKYDEKNGCVKLLQFLNPDPLK
TDGIHDILQKLKSSIPQPSVVLRNKIKPCSFETAPLSVGLKKTLRKNKFLEPTHTESYCW
PPIARGCDVIVISHNGNDPLLYIPPVLTFLQTGGCYKSLPSRNGPLVVIVCPGWKKAQHI
FELLQEYGRGSRPLHPMLLIIGLNKEEAQNTKFQRGCEVIITTPHSLLRLLKYHSLLFLR
LCHLIFDEVEVLFFEAGEQMLTILDYFKKTIIIEERESAPHQIVAIGAHWSKHIELLTKE
FMNDPYIVITAMEEAALYGNVQQVVQLCLDCEKTSTLLRMLDFSPCHAQKILIFTSSVAE
AEIVCKVVESSSIFCLKMHPEIAANLKNVLEQWKKKLSLGSHIVLVSTDDCIPPLAITDA
TCVIHFSFPGSPKIFGARLYCMSDNFQSSVEQGASSEQGNKKAKSILLLTERSACCAVGI
LRYLERTDAKIPPELCDFTAGVLEAKEDKKLRRPLCHYLKVSGFCKDKRICPDRHYINPE
IDMPRKLSDRPLATTGYVKIIPFYIVNATNYFGRILDKHKDLYAALNMEMEEYFKESSNK
MSVEKVEKFALYGLHEKAVFHRVQVLEMSQKEENCVFFNVHIKFIDEGRISNTKNHQLLR
LPQRFQNVPPQAVEFIVCRVKPIDNEVEWNPKVTRYIHHKIMGKLHEAKVVLSLGNTVWV
DPMVHLTKLSDLKTSVIEYNVRAEILSMGMGTDNPEHIDQLKKLCQESTMVALQESTFQT
TIPPLTPNKSTEETADLQSSISDDDKISENNISKQVNTENPESEVVSENSGDNYIKETRQ
QQHKSFHPEIKWFQKEDVVVVRIRLRNVKDQKCKFFRERVVFSAWVGDKFYLADMDLHAS
ILKEESKCLIKNEEPIVTLVKEKKESWHNLLKKRNPNVSFDFDHWEECEDISPFSNVVCS
RKVLNIGVQINEDIDDSSEDSETESE
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagttttcatacttaagattgaagatcctggatgcttctgggttattataaaa
ggatgtgatgcctttttagatcatgaaatggaataccaaaagttaaatattgaaatgaat
gccttctacaatagtgaatataaagatgtagaaaaaataaagccgttactcttggaagaa
ggacaggcttgtgtggtttattgtcaggaactgaagtgctggtgtagggcagttattaag
tcaatcatgtcctctgcagaccattatttggcagaatgcttcctggtggattttgccaaa
tatattcctgtaaaatcgaagaacatccgagttgcaatagacgctttcatgcgacttcct
tatagagcaaaaaagtttagactatactgcacaaaaccagtcacattacatattgacttc
tgtgaagacaatgcagaaatcatacctgctaagaaatgggatagtgctgctattcagtac
tttcagaatattctgaaagcagctacacactttgaagcaaaattatgtggtatggaagaa
gatatttttgatgtttacctttatataactataaaaaatgaaaaggtatgtgttaatgat
gatctggttgcaaagaactttgcttgttatgtaacacccaaggaaaaaaaaattgattgc
ccagagaaagctacaccaaagaatgtggaatcccctccagataaaatcaatcctgcactt
gctctttggccaatgttgttgcaagaaaatattccagaaaaacttgaaaaaggtgtgatt
ttacaacataatggactttcattagatttatcctctaaaaaagtgagtgagaagatagag
aagatatataaagaaaaggagtgtatgtattcaaaagaaataaataaaattactgtcgca
actgcagcatattgtcctagaaaaggaggcataactatttatgctgagccagatgtacat
gcagaaagttcatgtcagaagttaaatgaaaaacaattcaaattgacatcaaagaagaaa
tatgatgaaaaaaatggctgtgtgaagttgctgcagtttttaaatcctgatcctttgaaa
actgatggcatccatgacatactgcagaaattgaagtctagcatcccgcaaccttctgtt
gttcttcgaaataaaattaaaccctgttcatttgaaactgctccgctttcagtgggttta
aaaaagacacttagaaagaataaatttctagaacccactcacactgagtcttattgctgg
ccaccaatagctcgtggatgtgatgtgattgtcatatctcataatggaaatgatcctctc
ttatatattccaccagtgcttacatttttgcaaacagggggctgctacaagtcattaccg
agtagaaatggaccattagtggtaattgtatgccctggatggaaaaaagcgcagcacatt
tttgaattattacaagagtatggtagaggttctaggcctcttcatcccatgttgttaata
attggacttaacaaagaagaagctcaaaatacgaagtttcagaggggatgtgaggtgatt
ataacaacaccccatagtctcttgagacttctgaagtatcatagtttattatttcttaga
ctctgtcaccttatttttgatgaagttgaagtattgttcttcgaagctggtgagcaaatg
cttactatcttagactatttcaagaaaactattatcattgaagaaagagaatctgcacct
catcagattgtagctattggagctcattggagcaaacatatagaacttttaaccaaagaa
tttatgaatgatccttacattgttataacagccatggaagaagctgctctttatggaaat
gtacagcaggtagtgcaactttgcctagactgtgaaaaaacctcaacgttacttcgaatg
cttgatttcagtccatgtcatgctcagaagatcttgatattcacgagttctgtggctgaa
gcagaaatagtttgtaaggtagtggaaagtagttcaatattttgcttgaaaatgcaccca
gaaattgctgctaatttaaaaaatgtattagagcaatggaaaaagaagttaagtcttggc
tctcatattgtattggtttcaactgatgattgcatacctcctctggctataactgatgca
acttgtgtgattcattttagttttcctggttctccaaaaatttttggagcgcgtttatat
tgcatgtctgataatttccaaagttcagttgaacagggtgcttcttcagagcaaggaaat
aaaaaggcaaaatctattttgctactgacagaaagaagtgcatgctgtgcagttggcata
ttgcgttatttggaacgaacagatgctaaaattcctccagagttgtgtgacttcactgca
ggtgttttggaagctaaggaagataaaaaactcagaaggcctctatgtcattatcttaag
gtttctggtttttgcaaagataaaaggatatgtccagatcgacattatattaacccagaa
atagacatgccaaggaaactatctgaccgacctctggcaacaactggatatgttaagata
atacctttctatattgtgaatgcaacaaactattttgggcgcatacttgataaacacaag
gatctgtatgcagctcttaatatggaaatggaggagtattttaaggaatccagtaataaa
atgtctgttgaaaaagtcgagaagtttgccttgtatggactacatgaaaaagcagttttt
cacagggttcaagttttggaaatgagccaaaaagaggaaaattgtgtcttttttaatgtt
catataaaatttatagatgaaggcaggattagcaatactaaaaatcatcagctgcttcgt
ctaccccagagattccaaaatgtacctcctcaagctgtagaatttattgtttgtagagtg
aaacctattgacaatgaagttgaatggaacccaaaggttactagatatattcaccataaa
attatgggaaaactacatgaggcaaaagtagtactgtctttgggaaacacagtttgggtt
gatccaatggtccatctcaccaagctttcagatttgaaaacttctgtaattgaatataat
gttcgagctgaaattttatcaatgggaatgggtaccgataatccagaacatatagatcaa
cttaaaaaactatgccaagaaagtacaatggtagcccttcaagagagcacattccaaacc
acaatacctcctttaacacccaacaaaagtacagaggagacagctgacctgcaaagctca
atatcagatgatgacaaaatttcagaaaacaatatttccaaacaagtgaatacagaaaat
ccagagtctgaagtggtatcagaaaatagtggagataattacattaaagaaacaagacag
cagcagcataaaagtttccacccagaaataaaatggtttcaaaaagaagatgttgtagtt
gtgaggataaggctaagaaatgtaaaagatcagaaatgtaaattttttagagaaagggtg
gttttcagcgcttgggtaggagataaattttacttggctgatatggacctacatgcaagt
atattaaaagaggaatccaaatgtctaattaagaatgaagaacctatagtcactcttgta
aaagagaaaaaagaatcttggcataatttgctcaagaaaaggaatcctaatgtgtctttc
gattttgatcattgggaggaatgtgaagatataagccccttttctaatgttgtgtgctct
agaaaggtactcaacattggtgtgcagataaatgaagatatagatgattcttctgaggac
agtgaaactgagagtgaatag
DBGET
integrated database retrieval system
