Phascolarctos cinereus (koala): 110207489
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Entry
110207489 CDS
T05867
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110207489 (CHD9)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110207489 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
110207489
NCBI-ProteinID:
XP_020840832
UniProt:
A0A6P5K604
LinkDB
All DBs
Position
Unknown
AA seq
2916 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEDLSDDAFVQPGPVSLVDELNLGVEFEPLHIDSLNHVQDTQ
TPQKMTDFEQLSQFESLKLHQVNQSFNSPVENVLSPHSQFSCSPVHPPNQSNGLFPDVAD
GSPMWGHQTSVSNQNGSPFHQQGHSHSMQQNKSFVAHPDFALFQVNEQQQQCTSLQSQQN
NNNPGQETLSQSKNFMEVNISGPHRVHVTHPSQITSASTSQQPLSMQQFSPTANASMHFC
GNHQDGNFNGQSPNMTPCSVNNSQQFSSHYSFSSNHISPSSLLQSSTALASSHSTHTLSD
FTGSNAFIAQTGTKQESAPHILNSNSSLNSNNFEMLHSAHPQGNFSSSKLSPVHMNFPDP
IGSASHMGHFNDHVETNGFSSLEDNLLHQVGSQTETFTGLDPEDLLQEGLLPQFDDSAFG
QDSSSHVLEHDLDQQLTPQLLTQPPDVARTHSQSQVHSWHLSVSNHQHLHDREHSSLQHQ
PPSCKKTDGSGTYAKLQNTQVRAISEKKQKRKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPSVSAEGKEEKKGRRMKSKPKDKESKKTKTCSSTKLKEKTKIGKLIITLG
KKQKRKNVSSDEMSDAEQIPQRPFRDEDSQLLIQWRVVAQGSWAAARVEKRRSNRQVKRK
KYAEDAEGKQSEEEAKVSVKIKKSSASLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKK
EISPGMMIDAEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADM
EEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEE
FEQLQASRPDSRHLDRPPPNTWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCIL
ADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSLV
SRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLK
NKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKT
EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSK
GAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPDFHLQAMIQSAGK
LVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDR
FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKV
YRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGA
IMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFW
QKWAKKAEIDIEAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRP
CDRSNGYGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRALLAYCLVHY
RGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLR
KYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDVWVP
EPDHSEVPAEWWDLDADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQR
ANDYMDGDVEDPEYKPAPAMFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTT
RLRRLITAYQRTSKNRQALQIQPAFSVQANVMQPPYEEAVLNPKIAAKIERQQRWTRREE
ADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSK
EELVDPSIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWEC
GTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQSKVSHSRTSTPLIQQYQMAL
SASPLASQPRLLDTKGNALEDTKVKSESLKEEPQSSGEESVSSEEIRTGIKSEPLSPKNG
ILPQTTGDQKSAGKIETDRRMVAARTEPLTPNPASKKQRVPKRGSESSSDSDSDSDRSSC
SSRSSSSSSSSSSSCSHSQSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEESDSEEEA
QKRAEGTTHIKSYDEESVASLSTIQDETQDSFQMNNGTPNSAYILQGGYMLAASYWPKDR
VMINRLDSICQTVLKGKWPAARRGYEGSAVASFYTTKLLDSSGAAADTGEPRVPTPPSAG
VREEHDQSTQMSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFENEDGSLGQQQY
LARLRELQNASETSLVNFPKSMPVSGTSSQPAVGANGVILDNQPIVKKRRGRRKNVEDVD
ILLLNRNKPPNHVTVGVTTSQITPGINPALSYTQSQGILDIENPVPVINLKDGTRLAGDD
APKRKDLEKWLKEHPGYVEDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQ
LINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMHDRILTGPV
VREEVSRRGRRPKSEIAKATAAAAAATAANVSGNPLLANGLLPGVDLTTLQALQQNLQNL
QSLQVTAGLMGMPASLSGGEVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPSESVAEEK
KGNDSKEPDGRKERTENQNSDNVGENSVSSSPSASSSAALNTAAAASPLALNPLLLSNIL
YPGMLLTPGLNLHIPALSQSNIFDVQNNKNNDLDSSKPVEEKEEDSRVRDQEEKGETEPS
SLNENSTDEGSEKADASSGSESTSSSSEESDSSNED
NT seq
8751 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggatttttttgatgatgccaatctttttggtgagaccttagag
gatttgtcagatgatgcctttgtacaaccaggacccgtttcacttgttgatgaattgaac
ttgggtgtagaatttgaacctttgcacatagattcattgaaccatgtccaggatactcaa
acaccacagaagatgactgattttgagcagttaagtcagtttgagtcactgaaacttcac
caagttaatcagtcattcaatagcccagttgaaaatgtgttatcaccacattctcaattt
agttgttcaccagttcaccccccaaatcagtctaatggtttgtttccagatgtagctgat
ggcagtccaatgtggggccatcagactagtgtttcaaatcaaaatggatctccttttcac
caacaaggacattcacattctatgcagcaaaataaaagctttgtagcacaccctgacttt
gccttatttcaggtcaatgagcaacagcaacagtgcacgtcactacagtcacaacaaaac
aataacaacccagggcaagaaactttaagccaatctaaaaattttatggaggttaatatt
tccggtccacatagagtccatgttacccacccatctcaaattaccagtgcatcaacttca
caacaacctctctccatgcaacagttttctcctacagcaaatgcctcaatgcacttctgt
ggcaatcaccaagatgggaattttaatggacagtctccaaatatgactccttgctctgtc
aataattcacaacagttttcttcacattattccttctccagtaatcacatatctccaagc
agtcttcttcagtcctctacagctcttgcatctagtcattcaactcatactttatctgat
tttactggaagcaatgcctttatagctcagacggggaccaagcaggaatctgccccgcac
atcctaaactcaaattcatctttgaattcaaataattttgaaatgttgcattcagcacat
cctcagggtaacttcagcagctcaaaattatctcctgtgcacatgaatttcccagatcct
ataggttctgcttctcacatgggacatttcaatgatcatgtagaaacaaatggtttttca
tctctagaagataatttacttcatcaagtagggtctcaaactgagacattcacaggactt
gatccagaagatcttcttcaggagggtctccttccccaatttgatgactcagcatttggg
caagatagttcgagtcatgtcttggaacatgaccttgatcaacaacttaccccacagctt
ttaacacagcctccagatgtggctcgaactcattctcaaagtcaagttcactcatggcat
ttgtcagtttctaatcatcaacacttacatgacagagaacattcatctttacaacaccag
cctccttcctgtaagaaaactgatggatctgggacatatgctaagttacagaatacccag
gtgagagccatatctgaaaagaagcagaaaagaaaggtggaatcagaaagcaagcaagaa
aaggctaatcgtattatatcagaagcaatagcaaaagcaaaggaacgaggggaacgaaac
attcctcgagtaatgagccctgaaaactttcctagtgtttcagctgaaggaaaggaagaa
aaaaaaggtagaagaatgaaatctaagccaaaagacaaggaaagcaagaaaacaaaaact
tgttcctcaaccaagttaaaagagaagacaaaaattgggaaactcattattacattgggt
aagaagcaaaaaagaaagaatgtttcttcagatgagatgtctgatgctgagcagattcca
cagcgtccgttcagagatgaggattctcaacttcttatccaatggagagtagtggctcaa
ggctcctgggctgctgcaagagttgagaagagaagatcgaatcgccaagttaaaaggaaa
aagtatgctgaagatgcagaaggaaaacagtcagaagaagaagcaaaagtttctgtgaaa
atcaagaaaagttcagcttctttacctgctgaacaacctttgcagttatttgtggagaat
ccaagtgaagaagatgctgcaattgtggacaaaatactgtcttctaggatagtaaagaag
gaaatatcacctggaatgatgattgatgcagaagaattttttgtaaaatacaagaattac
tcatatcttcactgtgagtgggccacagaacaacaacttttaaaagataaaagaatacag
cagaaaatcaaaagattcaaattgagacaagcacaacgagcacatttttttgcagatatg
gaagaagaaccttttaaccctgactacgtcgaagtagacagagttttagaagtttctttt
tgtgaagataaggacacaggtgagcctgtaatttactacttggtaaaatggtgctcactg
ccatatgaagatagtacatgggaactgaaagaggatgtagatcaagcaaaaatagaagaa
tttgaacaactgcaagcctcaaggcctgactctaggcatttggaccgtcctcctcctaac
acttggaaaaaaatagaacactccagagaatacaaaaatggcaaccagctcagggaatat
caactagaaggactcaactggctattatttaattggtacaatagacgaaactgcatttta
gctgatgaaatgggtcttggcaaaacaattcagtcaattacattcctctacgaaatactt
ctgaccggtatacgggggccttttctcatcattgcaccgctttcaactattacaaactgg
gagagagaatttcgcacatggactgatcttaatgttgtggtatatcatgggagcctggtt
agcaggcagatgatacagcagtatgagatgtacttcagggactcacaggggcgtattatt
agaggagcatacaggttccaggccataatcaccacttttgaaatgattctgggaggctgt
ggagagctcaatgcaattgaatggcgatgtgtgattattgatgaagcgcataggttaaag
aataaaaattgcaaactcctagaaggtctgaaactcatgaatctggagcacaaggtgctt
ttgactggtacaccacttcagaatacagttgaagagctattcagtcttcttcatttcctt
gaacccttacgatttccctctgaatcaactttcatgcaagaatttggggatcttaaaaca
gaagaacaggtgcaaaagcttcaagccattttaaaaccaatgatgttgagaagattaaaa
gaagatgtagaaaagaagttggctcctaaggaggaaaccataattgaagtagaacttact
aatattcagaagaaatattaccgggctatcttggaaaagaattttgcatttttatccaaa
ggagcaggacaagctaatgtacctaatttagttaacactatgatggaactcagaaaatgc
tgtaaccacccttatcttatcaaaggtgctgaagagaaaatacttggggaatttaaagaa
acacataacccagctgctcctgattttcatcttcaagcaatgatccagtctgctggcaaa
ttggtcctcattgataagcttcttccaaaaatgaaagcaggtgggcataaagtgctcatc
ttctcccagatggtgcggtgccttgacattttggaggactaccttatacataagaggtat
ctgtatgagcgaattgatggaagagtccgaggaaatcttcgacaggctgccatagatcgg
tttagtaaacctgattcagacagatttgtatttcttttgtgcactcgagctggtgggctg
ggcattaatttaactgcagctgacacatgcatcatttttgattctgactggaatcctcaa
aatgacctccaggcccaagctcgatgtcacaggattggtcaaaacaaagctgtcaaagtc
tacagattaataactcgtaactcgtatgagagagagatgttcgaccgggcaagcctaaaa
ttgggtctagataaggctgtattacagagcatgagtggaagagaaaatagtgttggtggt
attcagcaactgtccaaaaaggaaatagaagatctacttcgaaggggtgcatatggtgcc
attatggatgaagaagatgagggttctaaattctgtgaagaggatattgatcaaatttta
cagcgtcgcacaaaaacaatcacaattgaatcagaaggaagaggttcaacatttgccaag
gcaagttttgtggcttctggaaaccggactgatatttccttagatgatcccaacttctgg
cagaaatgggcaaagaaagcagaaattgatatagaagccattagtggcagaaacagctta
gttattgacaccccaaggattagaaaacaaacaagacccttcagtgccacgaaagatgaa
ttggctgaattgtctgaagttgaaagtgaaggagatgataagcccaaactccgtagacca
tgtgaccgttccaatggctatggaaggacagaatgctttcgagtggagaaaaacctgcta
gtttatgggtggggtcgttggagagagattctagctcatggtcgatttaaaagacaacta
aatgaacaagatgtggagatcatttgccgagcccttttagcatactgccttgttcactac
cgaggagatgagaagattaaaggtttcatatgggatctcattacccctacagaggatgga
caaacaagagaattgcaaaatcacctgggcctgtcagctcctgtccccaggggccgaaaa
gggaagaaagtgaaaactcaagcaagcacatttgatatccataaagcagaatggcttcga
aagtataatcctgagcatctgctacaagatgaaggctataaaaaacacataaaacatcat
tgtaataaggttttgcttcgagtgcggatgctgtattatttaaaacaagaagtcattggt
aatgagttccagaaagtatttgacggagttgaagcaagtgacattgatgtttgggtccct
gagccagaccattctgaagttcctgctgagtggtgggatcttgatgcagataaatctctc
cttattggagtttttaaacatggttatgaaaagtacaacacaatcagagcagacccagca
ctatgttttttggaacgagtaggaaaaccggatgagaaagcagttgctgctgaacagaga
gcaaatgattatatggatggggatgtggaagacccagaatataagccagctccagctatg
tttaaagatgacatagaggatgatgtttcatcaccaggagatcttgtaatagcagatgga
gatggccaaatgatggaaggagacaagatttattggcctactcagtctgcgttaaccaca
cgcttgcgccgcctcataactgcgtatcagcggactagtaaaaatagacaagccctgcaa
atccagccagcattctcagtacaggccaatgtgatgcagcctccttatgaagaagctgtt
cttaaccctaaaatagctgctaaaattgaaagacagcagagatggacaagaagagaggaa
gctgacttttatagagttgtgtctacttttggagtggtatttgatcctgacagaggacaa
tttgactggacaaaatttagagccatggctaggctgcacaagaaaactgatgatagcttg
gagaagtacttatatgcttttatgtccatgtgcaggagagtttgccgtcttccttccaaa
gaagaattggtggacccaagcatttttatccaacccatcacagaagagcgtgcttctagg
actttgtatcgaattgagcttctgagaaaagtgcgagaacaggctctccgacatccacaa
ctatttgaacgcttaaaactttgccagccaaatccagatttgccagtctggtgggagtgt
ggcactcatgatagagatttgcttattggagctgctaagcatggggttagcaggacagac
tatcacattcttcgtgatcctgagctttcatttatggcagctcagaggaactacagtcaa
agtaaagtgagtcattcaaggacttctactccacttatacaacagtatcaaatggcactg
tctgcttccccactggcttctcaaccaaggttactggatactaaagggaatgctcttgag
gatacaaaagttaaaagtgaaagccttaaagaggagcctcagtcttctggagaggaatct
gtatcttctgaagaaatcagaacgggaataaaatctgaacctttaagcccaaagaatggt
attttgccacaaactactggagatcagaagtctgctggcaagattgaaacagataggcgc
atggttgcagccaggacagaacctttaaccccaaacccagcttccaagaaacagcgagtg
cccaaaaggggatctgagtccagctctgattcagattctgattctgacagatcatcttgt
tcttctagatcatcatcttcctcctcttcttcttcttcctcttgttcccattctcagtca
ggatctagttcttcatcatcttcatcttgttcttcagcatcttcttcatcctcctcttcc
tcttcctcttcttcctcttcttcatcctcatcagaagaaagtgatagtgaagaagaagca
caaaagcgagcagaaggcaccactcacataaaatcatatgatgaggaaagtgttgcatca
ctaagcactatacaagatgagacccaggatagtttccagatgaacaacggaactccaaat
tctgcttacatcttacaaggtggatacatgctggctgcttcttattggccaaaggatcgg
gtaatgatcaatcggttagacagcatttgtcaaacggtcctgaaaggaaagtggccggca
gcccggagaggttatgagggcagtgcagtggcatctttctacacgaccaagcttctggac
agctccggtgctgctgctgacacaggcgaaccccgtgtgccgactcccccaagtgcaggg
gtgagagaagagcatgaccagtccacacagatgtcaaaggtgaagaagcatgtacgagaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacttttcaaaagcaa
ggactttctcagaaaaggccatttgaaaatgaagatggttcacttggacagcaacagtat
ctggcacggcttcgggaactccagaatgcttcagagaccagcctagtcaattttccaaag
tccatgccagtatcaggtacttctagtcagccagcagttggtgccaatggagtgatatta
gataaccagcctatagtcaaaaaaaggaggggaagaaggaagaatgtggaagatgttgac
attctcctattaaatagaaataaaccacctaatcatgttacagtaggtgttaccacctca
cagattactccagggataaatccagcactgtcttacactcagtctcaagggatacttgac
atagaaaatccggttccagttattaatctgaaagatggaacaagacttgcaggtgatgat
gcacccaaaaggaaggatttagaaaaatggcttaaggagcacccaggttatgtggaagat
ttaggagcttttattcctagaatgcagcttcatgatgggagacctaagcaaaaaagacat
cgctgcagaaaccccaacaaactagatgttaatagtctcaccggagaagaacgtgttcag
ttgattaatagaagaaatgccagaaaggtaggaggagcatttgctcctcctttgaaagat
ttatgtagatttttgaaagaaaattctgaatatggagtcgctcctgaatggggagatgtt
gttaaacagtctggatttcttcccgaaagcatgcatgaccgtattcttactggtcctgtt
gtacgagaagaagtaagcagacgggggagacggcctaaaagtgagattgccaaggcaaca
gcagcggcggcagctgcaacagcagcaaatgtatctggcaatcctttgctagccaatgga
ttgctcccaggtgtggatctgacaactcttcaggccttacaacaaaacctgcaaaacctt
cagtcactacaagtaactgcagggttgatggggatgcctgccagcctatctggtggagaa
gttaataaaaacatggctgctatgttcccaatgcttttgtcagggatgacaggattacca
aatttactaggcatgggaggactcctgacaaaaccttcagaatctgtagcagaagagaag
aagggcaatgactccaaggagccagatggaagaaaagaaaggacagaaaaccaaaactct
gacaatgtcggggaaaactctgtatcgagttctccttcagcatcctcttctgctgcatta
aatactgctgcagctgccagccccttagctcttaacccattactattgtccaatatactt
tatccagggatgcttctcactccaggccttaatcttcatatcccagctttgtcccagtcc
aatatttttgatgtacagaacaacaaaaacaatgacctagactcatccaagcctgtagag
gaaaaggaggaagattccagggttagagatcaggaagaaaaaggggaaactgaaccaagt
tctctcaatgaaaacagcacagatgagggttcagaaaaagcagatgcttcatctggatct
gagagtacatcatcatcatctgaggagtcagattctagtaatgaagactga
DBGET
integrated database retrieval system
