Phascolarctos cinereus (koala): 110207626
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Entry
110207626 CDS
T05867
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw00100
Steroid biosynthesis
pcw01100
Metabolic pathways
Module
pcw_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110207626 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcw01006
]
110207626 (FDFT1)
Enzymes [BR:
pcw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110207626 (FDFT1)
Prenyltransferases [BR:
pcw01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110207626 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
TNFR_ELAPOR1_6th
SCC3_C
DUF1539
GAS
Motif
Other DBs
NCBI-GeneID:
110207626
NCBI-ProteinID:
XP_020840999
UniProt:
A0A6P5K7R3
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAAACCTKAGALFKLTLGLTPAAAPRASGIGVGNSQRCYVFAFFPWTTSRDWCRGEGVCY
WPPTISRLPQPRASSTSTSTSTSTCLLCPQDTLSDGLKTCYKYLNQTSRSFAAVIQALDS
ELRNAVCIFYLVLRALDTVEDDMTISMEKKVPLLQNFHSYLYQPDWRYMESNQKDRQVLE
DFSTVSLEFRNLADSYQVVINDICQKMGHGMAEFLEKKVNSVQEWDKYCHYVAGLVGIGL
SRLFSASELEDSIVGQDLKLANSMGLFLQKTNIIRDYLEDLMEGREFWPQEVWSRYAKKL
SDLAKPENIDLAVHCLNELVTNALQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAAC
YNNQQVFKGRVKIRKGQAVTLMMEATNMPAVKAIMYQYMEEIYQRIPSSDPSSSETKQII
SSVRKQNLPSCQLISRNHYSPIYLSCAMLLVALSWQYLSTMSQATEEYVQTGEH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcctgctgcaccaaggctggggccctcttcaagctcacactggggctgact
cctgcagcagcacccagggcttctgggataggggtcgggaactcccagcgctgttatgtc
tttgccttcttcccctggactactagtagggattggtgcagaggggaaggagtatgttat
tggccccctactatctctcgcttaccccagccccgtgcctcttcaacttctacttccacc
tccacctccacctgtcttctctgtccacaggacactctcagcgatggcctgaaaacttgt
tacaagtatttgaaccagacgagccgcagctttgcagcagttatccaggcacttgatagc
gagctgcgcaatgctgtgtgcatattttacctggttcttcgagctctggacactgtggaa
gatgacatgacaatcagtatggaaaaaaaggtcccattgttgcaaaattttcattcttac
ctgtaccagccagattggaggtatatggaaagcaatcaaaaggatcggcaagtcttagag
gacttttcaacggtctccttagagtttcgaaatctggcggacagctatcaagtggtgatt
aatgacatttgtcaaaaaatggggcatggaatggcagagtttttggaaaagaaagtgaac
tccgtgcaggaatgggataagtactgtcactatgttgctggactagtagggattggcctt
tctcgtctgttctcggcttcagagttggaagactccattgttggacaggacttgaagctt
gccaattctatgggtctgttcctacagaagacaaacattattagagattatttggaagac
ttgatggaggggagagagttttggccccaagaggtttggagtaggtatgccaagaagttg
tctgatttagctaaaccagagaatattgacttggctgtccattgtctaaatgaactggtt
actaatgctttacagcacatccccgatgtcctcacctatctttcccgactgagaaatcaa
agtgtgttcaacttttgtgctattccacaggtgatggctattgctactctggctgcctgt
tataacaaccagcaggtgttcaaggggagggttaagattcggaaggggcaagcagtaaca
ttgatgatggaagcgaccaacatgccagctgtcaaagctattatgtaccagtatatggaa
gagatttatcaaagaattccaagctcagacccatcttccagcgagacaaagcagattatc
tcctctgttcggaaacagaatcttcccagttgtcaactaatctctcggaaccactactcc
cctatttacctgtcgtgtgccatgcttttggttgcactaagctggcaatatctcagcacc
atgtcccaggccacagaagaatatgttcaaactggagaacactga
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