Phascolarctos cinereus (koala): 110208908
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Entry
110208908 CDS
T05867
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03015
mRNA surveillance pathway
pcw05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110208908 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
110208908 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110208908 (HBS1L)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110208908 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
110208908
NCBI-ProteinID:
XP_020842767
UniProt:
A0A6P5KDE0
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All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSSFVEPVEEYDY
EDTKEPTDSISNHQLSGIDQARLYSCLDHMREVLGDDVPDERMIEAVLQNKFDVEKALAM
VLEQDKKQTKNEEAVSMGKATKGKSVDPQSSRSESEIVPKVTKMTVSGKKQTMGFEVPGV
TAEENGDSVHTPHKGPPSEDANIAASGILEPVSKAALLSHTIQALEEQSTTPTPVKKTNK
LKQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
IVGKLGHFLKQAGFKEGDVAFIPTSGLSGENLITKSQSSELTKWYQGKCLLEQIDSFKPP
QRSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGIMLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCVFCGPKEPIKACTRFRARILIFNIEIPVTKGFPV
LLHYQTVSEPATIRRLISVLHKSTGEVTKKRPKLLTKGQNALVELQTQRPVALELYKDFK
ELGRFMLRYGGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcacaggaacgtccgaggctacaactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcaagacgtgacaaaccatcatcatttgttgaaccagtagaagagtatgactat
gaagatacaaaagaacctactgactctatttctaatcaccagcttagtgggattgatcaa
gctcgtctttattcatgccttgatcacatgagagaggtgcttggagatgatgtcccagat
gaaagaatgattgaagcagtgctgcaaaacaaatttgatgtggagaaggctttagctatg
gtgcttgagcaagataaaaagcagaccaagaatgaagaagctgtctccatgggaaaggca
acaaaaggaaaatcagtagatcctcagtcatctcgaagtgaatctgaaattgtgccaaaa
gttaccaaaatgactgtatctggaaagaaacagactatgggatttgaagttcctggagtg
actgctgaagaaaatggtgatagtgtccacacacctcataaaggacctcctagtgaagat
gccaacattgctgcttctggtattcttgagccagtttctaaagcagctcttctgtcccac
accattcaggcattagaagaacaaagcacaacaccaacaccagtgaaaaagaccaacaag
ctaaagcagcaaatagatgtgaaggccgaactggagaagaggcaagggggaaaacagctg
ctcaacttggtggtaattggtcatgtggatgctgggaaaagtactctgatgggtcatctg
ctttacctcctgggcaatgtaaataaaagaactatgcacaaatatgaacaagaatctaaa
aaggctggtaaagcctcatttgcttatgcttgggtcttggatgagactggagaagaaagg
gaaaggggagttacaatggatgtaggtatgacaaagtttgagaccaagaccaaagttatt
acattaatggatgctccaggccataaggacttcattccaaatatgattacaggagctgcc
caggctgatgttgctgttttagttgtggatgctagtaggggagaatttgaagctgggttt
gagactggaggacagacacgagaacatggactcttggttcgctctcttggagtaacacag
ctggcagttgcagttaataaaatggatcaggttaattggcaacaagaaagatttcaagag
attgttggcaaacttggacacttccttaagcaggctggttttaaggagggtgatgtggcc
ttcatccctacaagtggtcttagtggagaaaacttaattacaaaatctcaatcaagtgaa
ctaacaaaatggtatcaaggaaaatgtttgttagaacaaattgattctttcaagcctcca
caaagatctattgaaaaaccttttagattatgtgtatctgatgtttttaaagatcaagga
tctggattctgtgtgactggtaaaattgaagctggttatatccagactggtgaccgactg
ctagcaatgcctcctaatgaaacttgcactgcaaaaggaatcatgctgcatgatgaacct
gttgattgggcagcggcgggggatcacgttagtctcaccttggttggtatggatatcatc
aaaatcaatgttggttgtgtgttctgcggccccaaagaacccattaaagcctgtactcgt
ttcagagctcggatcctcatctttaatattgaaattcccgtcactaaaggattccctgtg
ctgttacactatcaaactgtaagtgaacctgctaccatcagaagattgattagtgtccta
cacaaaagcactggcgaagtcacaaagaaaagacccaagttgttgactaaaggccagaat
gctttagtagaactacagacacaaagacctgttgctcttgaattatacaaagactttaaa
gaactggggagattcatgctgcgttatggtggttctactatagctgcaggtgttgtcact
gagataaaagaatga
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