Phascolarctos cinereus (koala): 110209064
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Entry
110209064 CDS
T05867
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04151
PI3K-Akt signaling pathway
pcw04510
Focal adhesion
pcw04512
ECM-receptor interaction
pcw04820
Cytoskeleton in muscle cells
pcw04974
Protein digestion and absorption
pcw05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110209064
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110209064
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110209064
09142 Cell motility
04820 Cytoskeleton in muscle cells
110209064
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110209064
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110209064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcw04147
]
110209064
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110209064
Exosome [BR:
pcw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110209064
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110209064
Hyaluronan
Extracellular matrix or blood plasma proteins
110209064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
vWA_SIBA-E
VWA_CoxE
DUF1194
Motif
Other DBs
NCBI-GeneID:
110209064
NCBI-ProteinID:
XP_020842911
UniProt:
A0A6P5KEC0
LinkDB
All DBs
Position
Unknown
AA seq
2724 aa
AA seq
DB search
MDASQPLLWIILLAVTFCSVKPQINVCREASVADVMFLVDSSRGPEKSRNVRDFLSTLVS
GLDLGKDKIRVGLIQYSDMPSTEFSLNTYQRKEDVLRHIQALTFKHGGTQTGRALWFMLE
NHFLEIAGSRIQQGVPQIAVLITDGPTQDDIKEPVEAVKKAGVLLYAIGLQGAVFSELRE
VASNPDDKFIFEAADVSFLGDLSQNVLLALCTTIVEANPQGSQVSPACRKAAVADLVFLV
DSSTSIGPGNFQKVKSLLYSLASGLEIGRDQVRVGLAQFSDNIYEAFLLSQFPLKSDVLQ
QIRNLPYRTGGTRTGSALEFLRTAYFTDSAGSRAKDNVPQVVILVTDGESNDEVAEAASK
LKEGGVSIYVVGINVQDVQELETIASKPLEKFLFSIEDFNILEGLSGNILPTLCSAVENQ
IQAFTKSYADVVFLVDTSKGTSPATFHRMKSFIFRVIDVLEVGRDKYQIGLAQYGHQVHV
EFLLNTYQNLDEMIIHIQQNFVLRGGARKTENALQYMQETFFQEKAGSRFLQGIPQYAVV
ITSGHSEDLVSEAAQKLKGRGVKIMAVGIQNFDRRELEGMATPPFVFEIEGQDGVRQLQR
DMSQVFENSGRLDLSSEMGEEALAVCMSASVADIVFLVEASGGIGLENFQQVIQFLGKVI
RTLNIGPNNVRVGLVLYSDEPRLEFGLDMFLSQLEILSHLNKLPFIGGKTKTGAALDFLR
NIVFTQERGSRSGQGIQQLAVVITEGYSQDEVDRPASLLRRAGVMLFAVGTQKASGSNDL
DRIASYPARKHAIYLESFLQLSVVKDRVKKRFCTEIVQKTFSVPVMTRALKEGCINTEKA
DIYFLIDGSGSIVPEDFEEMKTFMNQLISMFHVGADKVRFGVVQYSDYSQTEFDISQYTS
VAQLMRAIASIQQMEGGTHTGDALRFMKHLFSNITRDKVLRFLIVITDGKSQDSVAQAAE
ELRQENITIYAIGVKSAITKELVEISGSGNRMFFVNDFDSLKYIQQEVVQDICFPEVCKD
MKADILFLVDGSERVCSRDFEKMKEFMRQMVNRSDIGPEKAQIGLLQFSSSTKEEFQLNT
YFSKVDILRAISAMVQMKAATYLGSALSFASPYFDMPRGGRRNVPQYLILIIDGEAKDAV
KMPAQALRDKRIKIFAIGAHKANNSQLLEVTGAQDKVYYDDNFDSLLFLEKEIFFRLCNV
EEACKKTEAADILFLVHASSGTTNQELVAIHRLMEAIVNDSLVGKDNVRFGAISYSDNSE
VLFSLDTYITKAQIREAILRLKPKVGKAHTATALKFAKGMFADMHGGRPSLGITQILVLI
TNKPTEFKERRYLQDSAEALKEADINVFAIGIKSVKRPELHTITRYQDRSFVVQSPDELC
DLHEKVTHVICSESKPICGHQQIDLVFLIDGSLSIHPRNFTAMKTFMKQMVNSFTIGKEK
VRIGVAQYSTDPKKEFYLNAFYSSAEVNKHVDKIIQLRSKTFTGKGLKFVKSFFEPANGS
RKNLNVLQSLVVITDGMSTDSVVEAASDLRNEKINIFAIGIGVINLFELQVIAGDVKRVF
VVGDFGQLGIIERKVVRELCEPQDIPSECNIDISVGLDTSNSVSLARQRLQQRLPNLMQK
LTLLSNISCVASTPLNIRLRYHVPTTDGRSWFDSGFEKYSEGILRKFFDQHDLESNYMNV
AFVRSLGEKALSLTSAKVKVLLVLTDGMDDNLERLKEISEFFRLKGLHALLLVGLQSGQK
LEELQDVEFGRGFGYKQPLSITMQALPNLLLRQLDTVVERECCKVNCKVWGDDGNSGEQG
NRGRKGVTGLHGMPGYPGDEGGPGERGVTGLPGPRGNGGCPGERGLKGSRGFVGEKGNRG
DNGMDGFPGEQGERGSSGISGEKGNTGRQGLRGPPGEAGEPGGPGLRGDPGEPGTDSDIS
GPPGDKGKQGHQGKPAPCVEGGMPGERGANGLRGRRGLPGPKGVPGETGTHGNNGVPGHP
GLEGPRGEQGPPGMSGHQGLPGDQGVPGPQGPLGPKGGAGPRGMKGELGFPGENGAMGPE
GPRGQRGIDGNDGYGHPGRKGAKGEPGFPGYPGIQGEDGDKGQPGNQGPKGFPGKRGNSY
SFGPLGSPGDPGPPGPMGSKGLKGLTDMMPCDIVDFTRKNCPCSSHKAKCPAFPTEVVFA
LDMSEGVTESEFERMRDILLSLLRRMSISQSNCPTDARVAVVSYNTKIHYLVRFSDFQNK
NLLLQAIRNIPLEESMAQRDLGTALRFVARNVFKRIRNGILMRKVAIFFVAGPSSDDASI
NTAMLEFSALDIIPTIIAFNDDPLIQHVLSMDDTKRFKLYVWENENAEDVEHVASCTLCH
DWCREDKECEVISPRPIRVDMDIAYVVDSSLRVTRDIFNAARSMVGSVLNHFVIASRPKT
STDGARVALVQQTVPGFFPYDSMPPVEKEFDLLMYSHPEQMQRHIRESVHPLRGLPYLGY
ALEWTIENIFPTDPLQRKNRVLFVIVGSETSPEDREKLWSISLEAKCEGFIFFIVALGTG
VNMEELARLASFPPEQHLLHLADISHLEMDYAERFIQAFLSLLKSEVNQYPPPRLLEYCE
ALHRGDTRREAALTQRLNFIRFGFNESDSRRSRKALKAKDPSLGMRGRISQITKTDREDI
EYHYRPEQNLVGALQKTEETRDETTDPDPCSMAKDAGMCRDYVLKWYYHRDQRTCQKFWF
GGCGGNQNRFETRQDCESRCVPLA
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgcaacccctgctttggatcattctcttagcagttacattctgctcagtc
aagccacagataaatgtctgtagggaggcctcagtcgcagatgtcatgttcctggtggat
tccagtagaggcccagaaaaatcccgaaatgttcgagatttcttgtctacattggtcagt
ggccttgaccttggcaaagataaaatcagagtaggcctgatccaatacagtgacatgccc
agcacagagttttccctcaatacctatcaacgcaaggaagatgtcttgaggcatatccag
gcattgaccttcaaacatggcggtacccaaactggccgggccttgtggttcatgttagaa
aaccacttcttggaaatagcagggagccggatacagcaaggggtcccccagattgctgtg
ctgattacggatgggccaacacaggatgacatcaaagagccagttgaggcggtcaagaag
gcaggtgtcctgctgtacgccatcggcctccaaggcgctgttttttctgagctcagggag
gtagcaagcaatcctgatgacaagtttatctttgaggcagctgacgtctctttcctaggc
gacctttcccaaaacgtgttactggcactctgcaccacaatagtggaggcgaatccacag
ggatcccaagtctctccagcctgcaggaaagcggcggtagctgacctggtcttcttggtg
gacagctccaccagcataggccctggcaacttccaaaaggtgaagagcttgctctactcg
ctggcgtcgggcctggagatcggcagggaccaggtccgggtcgggctggcccagttcagt
gataacatctacgaggcctttctgctcagtcagttccctctgaagagcgacgtgctgcag
cagatacgaaatctcccctaccggaccggagggacccgcacggggagcgccttggaattc
cttaggaccgcctatttcaccgactccgcgggcagccgcgccaaggacaacgtccctcag
gtagtgatcctggtgacggatggggagtccaacgacgaggtggccgaggcggccagcaag
ctgaaggaaggaggcgtgtcaatctatgtggtgggaatcaacgtgcaggatgtccaggag
ctggagacaatagctagcaagcccttagagaagttcctttttagcatcgaggatttcaac
atcctcgaaggtctctctggcaacatccttcctacgctgtgctcagcggttgagaaccag
atccaagcatttaccaagtcctatgctgatgtggtcttccttgtggatacgtcaaagggc
acatcaccagccactttccatcggatgaaaagttttattttcagagtcattgacgtgttg
gaggttgggcgtgacaagtaccagattgggctggcccaatatggtcaccaagttcatgtt
gagtttttgctcaacacctatcagaacctagatgagatgatcattcacattcagcagaat
tttgtgctccgaggaggtgccaggaagacagaaaatgcccttcaatatatgcaggagact
tttttccaggagaaggcagggagtcgcttcctccaaggcatccctcagtatgcagtggtc
atcacttctggtcattcagaagacttggtttcggaagctgctcagaagcttaaggggagg
ggagtgaagatcatggcagttggtattcaaaactttgacagaagagaactagagggcatg
gccactcctccctttgtgtttgagattgagggacaagatggggtcaggcaacttcagcgg
gatatgagccaagtgtttgaaaactctggccgtttggacctcagttctgagatgggtgaa
gaagccttagcagtatgtatgagtgcgtccgtggctgacatcgtgttccttgttgaggca
tctggtggaattgggttagagaatttccagcaagtcatacagttcctggggaaagttatc
cgcactctaaatattggccccaacaacgttagagttggcctggtgctttatagtgatgag
ccaaggctcgagttcggcctggacatgttcctgagccagttggaaatcttgagccacttg
aacaagttgccattcataggtggcaagaccaagacaggagctgctttggattttctcagg
aacattgtattcacccaggagagggggagccggtctggacaaggcattcaacagctggct
gtggtcattacagaaggctattcccaggacgaggtggacaggccagcttctctcctccga
cgggctggggtcatgctctttgctgtgggcacccagaaggcttcaggaagcaatgacctg
gacagaatagcatcctacccagctcggaagcatgccatctacttggagtcattcctgcag
ctctcagtggtcaaggacagggtaaagaaacgtttttgcacagagattgtgcagaaaacc
ttttcagttccagtgatgacccgtgccctgaaagaaggttgcataaacacggagaaagca
gatatctattttctcattgatgggtcaggcagcatagtccctgaagactttgaggaaatg
aagacattcatgaaccagctgataagcatgttccatgttggtgcagacaaagtgcggttt
ggggttgtccagtactcagactattcccaaactgagtttgacatcagccagtatacgagt
gtggcccagctgatgagggccattgcaagcatacagcaaatggaaggtggcacccatacg
ggggatgccctaagattcatgaagcatcttttttcaaatattaccagggacaaagttctt
cgctttctcattgtcatcactgatgggaagtcccaggactcagtggctcaggctgcagag
gaactgaggcaggaaaatatcaccatctatgccattggcgtcaaatctgctatcaccaag
gagcttgttgagatctctggctcaggaaataggatgttttttgtgaatgactttgattcc
ttgaagtatattcagcaagaggtcgtacaggacatctgcttcccagaggtgtgtaaggat
atgaaagcagacattcttttcttggtcgatggctctgagagggtctgctccagagatttt
gaaaaaatgaaggaattcatgaggcagatggtaaacaggtcagacatcggccctgagaaa
gcacagattggcctcttgcaattcagttcaagcaccaaggaagagttccagctcaacaca
tacttctccaaggtggacattcttagggccatctctgctatggtacaaatgaaagcagcc
acctatctgggcagtgccctatcctttgcttctccttactttgatatgccaagaggagga
agacgtaacgtaccccaatatttgatcctaatcattgatggggaagccaaagatgctgtg
aaaatgccagcccaggccctcagagataaaagaatcaagatctttgccattggagcacat
aaggccaacaactcccagctgctggaggtcacaggtgcccaggacaaggtgtattatgat
gataactttgattccctccttttcctggagaaggagatattttttaggctctgcaatgtg
gaggaggcctgcaaaaagacagaagcagcagatattctgttcttggtacacgcatctagt
ggcaccaccaaccaagaacttgtggccattcacagactcatggaagccattgtcaatgac
tcactggttggaaaggacaatgtgagatttggggctatttcctatagcgacaattcagaa
gtactgttttcattggatacctacattactaaagctcagatcagggaagccattttacgc
ttgaaacccaaggtgggaaaagcccatacagccacagctttaaagtttgctaagggaatg
tttgctgacatgcatggaggtcgcccgtccttgggcatcacccagatcttggtactcatt
accaacaagccaactgagtttaaagaaagacggtacctgcaagactcagcagaggctctc
aaagaagctgacattaatgtctttgccattggaataaaaagtgtcaagaggccagaactt
cacactatcacaaggtatcaggatagatcgttcgtggtgcagagtcctgatgagctttgt
gatttgcacgaaaaagtgactcatgtcatatgtagtgaatcaaaaccaatttgtggccat
cagcaaatagaccttgtgtttctgatcgatggatccttgagcatccatcctcgaaacttc
actgccatgaagacttttatgaagcaaatggtgaatagtttcactattggcaaggagaag
gtccgcattggggtagctcagtatagcactgatcctaagaaagaattctaccttaatgct
ttctactccagtgctgaagtcaacaaacacgttgacaagattatccagttgagaagtaaa
acattcactggtaaagggctgaagtttgtaaagagcttttttgaaccagccaatgggagc
cggaagaacctcaatgttttacaaagcctggtagtcattactgatgggatgtctactgat
tcggtagtggaagcagcaagtgacttgagaaatgaaaaaatcaacatttttgccattggt
attggtgtcatcaacctctttgaacttcaggttatcgctggcgatgtgaagagggtgttt
gtggtgggtgactttggacagctgggcattatcgagaggaaggttgtcagggagctctgt
gaaccacaggatattccttctgagtgcaacatcgatatctcagtaggacttgacacttcc
aactcagtcagtctggcgcggcagagactgcagcagcggctgccgaacctgatgcaaaaa
ctgaccctgctgtccaacatcagctgcgtggccagcactccactcaacataaggctacgc
taccatgttcccacgactgacggccggtcttggtttgactcgggctttgagaagtacagt
gaagggatactccggaagttctttgaccagcatgacttggagagcaactatatgaatgtg
gcttttgtgcggtcccttggggagaaggctctcagcttgacctctgctaaagtgaaggtt
ctcttagtgcttacagatggaatggatgataatttggaaagactaaaggaaatctcagag
ttctttcgtctcaaaggtctccatgcacttttattagttggcttgcaaagtgggcagaag
ttagaagaactccaggatgttgaatttggccgaggatttggttataaacagcctctgagt
atcacaatgcaagctcttccaaacctcttgttgaggcagcttgacacagttgtagaaaga
gaatgctgtaaggtcaactgcaaagtttggggagatgatggtaactcaggagaacaaggg
aaccgcgggaggaagggagtgacaggtcttcatgggatgcctggctatcctggtgatgaa
ggtggacctggagaaaggggcgttactggcttgccgggacctcgcggcaatggagggtgc
ccaggtgaaagagggcttaagggatcaagagggtttgtaggagaaaagggcaatcggggt
gacaatggaatggatgggtttcctggagaacagggtgaacgtggcagttctggaatctct
ggagaaaaaggaaatactggaagacagggcttgaggggtcccccaggagaagccggtgaa
ccgggaggtcctggtctgagaggagatcctggagaacctggaaccgatagtgatatttct
ggtcctccaggagacaaaggaaagcaaggtcaccagggaaagcctgcaccgtgtgttgag
ggaggcatgcctggagagcgaggcgcaaatgggctaagaggtagaaggggtttacctgga
ccgaagggtgtgcctggagaaactggtacacatggtaacaatggagttcctggacatcca
ggcttagagggtccaagaggtgaacaaggaccaccaggaatgtctggacatcagggttta
ccgggagaccagggggtgcctgggccacaaggcccacttggtcccaaagggggtgctgga
ccgaggggaatgaagggggagcttggttttccaggagaaaatggtgcaatgggaccagaa
ggaccaagagggcagcgtggtatagatggcaatgatgggtatggtcatccaggaagaaaa
ggagctaagggtgaacctggcttccctggataccctggcatacaaggggaagatggtgat
aaaggccaaccaggaaaccaaggaccaaagggatttccagggaaaaggggaaattcttac
tcgttcggacctctaggatcaccaggagatccagggccccctggaccaatgggcagcaag
ggattgaagggtttgacagacatgatgccttgtgacattgttgacttcacgagaaaaaac
tgcccttgttcatcacataaagccaaatgtccagcattcccaaccgaggtggtctttgct
ctggacatgtctgaaggggttacagagtcagaatttgagaggatgagggatattttgctg
tcgctgctaagaaggatgagcatcagccaaagcaattgtccaactgatgcccgggtggcc
gttgtttcctataacaccaagatacattacttggttcgcttctcagactttcagaacaag
aatctactcctccaagccatcaggaacatccctttggaggaatccatggcccagcgggac
cttggcactgccctgagatttgtggcaagaaatgtcttcaaacgtattcgtaatggcatc
ctcatgaggaaggttgccatattctttgtggcaggcccatcctctgatgatgcttctatc
aacacagccatgctggagtttagtgccctggacatcattcccactattatcgccttcaat
gacgatcccctcatacaacatgtcttgtcgatggatgatacaaagaggtttaagctctat
gtgtgggaaaatgagaatgctgaggatgtggaacatgtggcctcctgcactctttgccat
gactggtgcagagaagacaaggagtgtgaagtgattagccctaggcccatcagggtggac
atggacatagcctacgtggtggacagctctctcagggtcacacgtgacatatttaatgca
gccagaagcatggtgggctccgtgctgaatcactttgtcattgcttctcgtcccaagacc
tccacggacggagccagggttgccctggtgcagcagacggtcccaggcttcttcccttat
gacagcatgccccctgtggagaaggagtttgatttgctcatgtacagccatccagagcag
atgcagaggcacatacgggagtctgtccacccgctccgagggcttccttacctgggctat
gccctagagtggactattgagaatatctttccgacagatcccctccagaggaagaaccgg
gttctctttgtgattgtgggaagtgagacaagtcccgaggacagggagaagctgtggagc
atctccctggaagccaagtgtgaaggcttcatcttttttatcgtggccttgggcacagga
gtcaacatggaagagttggcccggctggccagcttccctcctgagcagcacctgctgcat
ctggctgatatctcccatctggaaatggactatgctgagcggttcatccaggccttcctg
agccttctgaaaagtgaggtgaaccagtacccacctcctagacttctagaatattgtgag
gcgctgcatcgaggagatacccggagagaggcagccttgacccagaggctgaactttatc
agattcgggttcaatgagtctgactccagaagaagcaggaaagcacttaaggcaaaagac
ccttctctggggatgagggggagaatctcccagatcaccaagaccgacagagaagacatt
gagtatcattacagacctgaacaaaatctagtgggagccctgcaaaagacagaagaaacc
agagatgaaaccactgaccctgatccttgttccatggctaaggatgctgggatgtgccgt
gactatgtcttgaagtggtactatcatcgggaccagcgcacctgccagaagttctggttt
ggtggctgtggtggcaaccagaaccgatttgaaaccaggcaagactgtgagtcccggtgt
gtcccgttagcctag
DBGET
integrated database retrieval system