Phascolarctos cinereus (koala): 110209065
Help
Entry
110209065 CDS
T05867
Symbol
COL6A5
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(VI) chain
KO
K06238
collagen type VI alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04151
PI3K-Akt signaling pathway
pcw04510
Focal adhesion
pcw04512
ECM-receptor interaction
pcw04820
Cytoskeleton in muscle cells
pcw04974
Protein digestion and absorption
pcw05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110209065 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110209065 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110209065 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110209065 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110209065 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110209065 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcw04147
]
110209065 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110209065 (COL6A5)
Exosome [BR:
pcw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110209065 (COL6A5)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110209065 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
110209065 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
TssR_VWA
DUF6849
Motif
Other DBs
NCBI-GeneID:
110209065
NCBI-ProteinID:
XP_020842912
UniProt:
A0A6P5KDX6
LinkDB
All DBs
Position
Unknown
AA seq
2674 aa
AA seq
DB search
MRQSRIFFSGKKSPSLKTFYKMKMLLISLTLIIWAGTSADQSPGPEFADVVFLVDSSDHL
GSTSFPFVRTFISKMINSLPIEADKFRIALAQYSDDLHQEFLLNTFKTKKAMFDHLKKNF
NYIGGSLRVGNALEKVHKTYFSGPANGRDKKLFPQILVVLASAKSEDDVVGPAEALHRDG
VEIIALGIQEASEENLKAMATSQHHYNLRAVRNVGMFSGNMTRIIKETIKQKARMQDVDE
VVCERDSVADIVFLLDESLEVRGNLEDLQRFLENITASMDVRAGCTRIGMLRFSDRAEVV
TSLESRMSHAEIAQAIGSLSLRDGKAYIGKALKKAREEVFSHSRKAQGVRQIAVLVTHRS
SEDEVNEAAEDLLLQGVSIFAIGIEGYNITQLEQIVSYPVDHYISIQKSYTDLEPYSVTF
LNKLQYEIQYRMSVQREHTERYRTGCIETEKADIYFLIDGSGSVKNYFQEIKNFMIEVTQ
MFIVAPEKVRFGAVQYSTSSQEEFGIGVHSNKVNLGKAILNIRQMGYTTNTGAALNFMLQ
VIQGSKRKQPSNIPCHLLVLTDGKSDDKVTEPAKRLREEDVIIHAIGVKGANIHELEDIA
GSKDRVKFVHNFDSLKGIKDEIVQSICHERDCKDKKADIMFLVDSSGSMGAATFSKVKEF
MKNLVDKSHIGIDQGHVGVIQFSNFTKKEFGLTEHMTKSDIFDAIDRMSPIGSKTYTGKA
LRFVSDYFEPLKGGRSGVKKFLILVTDGKAHDKVKEPALDLRNKGVTILLVAIFRSKSPQ
LEDITGNANLVYYVESFDNQKLLEDKLVFDICTLDECKQIQKLDIVFVLDDSSSIDPHQH
QSMINFTMHLVNKSDVGSDGVQFGALKYADDPEILFYLNTYPTKEGVIKGLNYLKGGVNT
YTAKALKKSHELFTEEKGSRINSGVKQMLIVITDGESHDSKDLEATAKTLRDKNIIIYGV
GVAAASEKELFDITGSKDKYFMVDNFEKLEEIYLPIEKKACDNSLDVCDMKKADIFFLCD
GSDLVTEQEFGKMVYFLADIIDYLDVSSENTHVGMSQLGTLHQEIIQLNDTLDKNERKAK
ILAALKRNGSPRLEVALRHMKDTFVSGSRLVAGVPQILFVVLSGQPKGSVAMVTEAVAKL
RELGVCIIALGIGNVRNDEFLHITHNPEKIITVSDFDNLKKVEVKKRVAREICRNCQQKS
CFVDTLVGFDISTHRRGQTLFEGQPHLESYLPGLLESINSLRGVSCGRKTQVSVAFKVNT
DTGFEPRFQIYAETMMETLRQVTVSGPSHLQVADLESLWSVFNHSENHGKVILIFSDGLQ
HGANDLWRLEKKSDELREQGLMGLFVVALNTTSHHDDFSTMEFGKGFDYRTHLSIGMRDL
SGTLTKYLDNIAERHCCCALCKCSGAPGAPGSPGSRGAKGFWGQKGSRGHTGEEGEPGIR
GNSGPEGERGAQGCQGDRGLKGVRGMDGFEGEEGDYGIDGINGEEGFHGTFGKKGEKGDP
GSQGSLGTRGPPGVHGGKGFPGDPGEPGNDNFSRGPKGAKGEQGRQGRRGQKGTDGEPNS
RGDIGPIGRRGTHGPKGLRGNVGPKGEDGPEGLRGTEGQIGNTGQKGEKGSPGNKGPQGS
SGSAGTKGSPGKPGTLGRKGEPGVPGDKGTMGPTGSRGMQGDLGIAGYGRQGRKGAKGPR
GQPGDSGNQGDVGDPGIQGEAGPKGFRGLAFGPGPKGEIGFPGAPGPAGPRGPKGMKGQP
LSSECELLNFLRDHSPCWEGKCPVYPTELVFALDVSRQRFEFVKNMTISIVKDLKIRENN
CPMGAKVAVLSYSSDSRYLVRWSDYSSKQQLLQKLSRMTFQRPSYPRDLGDAMVFVARNV
FKRTLPGPNVRRLTVFFSDNQSPDISSIITATMEFSGLNIIPAVFAFNEMFXLEEAFQFN
DTGTYQVIPVLPSQFSEPIERLRQCTLCYDKCFLNVCAEEQVDQINSYMDALFLLDSSRH
VTGDEFEQMKSFLSSVLDSFDISEDPFQSNVGDRLALLSYSPGDFSRRRISTPVKEEFVF
TTYNSKTLMKRYIQDSLKQLHGESFVGHALQWTTERVFSNTEQSRKNKVIFVISAGENNE
KKDVLREMALRAKCQGYVIFVISLGSTREEEVEDIASLPLDHHLIQLGRIHKPNLDYAVR
FIKPFVYSVRRGFNKYPPTTMERQCKLILSEPSFFLNRNNIFTSDIYDISSGENVLLSEV
ARNPEHSPILLEDNQSEEMVYLPYQMLMPEELIVKYPKTVGTEEIKTLTSESIVDNAQDL
ESEEMGMKPGSTYMVLESPYLIAGKPMDMEMVDMDLKPVSAYLPVGDDNLGGKEESGFPL
ESGTLSPEDVFMDVAFLLDSSRNVGSSEFQEIKELIASVFDYFYIAPDPVTSHIGDRVAL
LSYSPQGYMPNAEECPVYVEFDLVTYNSVHQMKSHVWESLQPLNGESFVGHALKWTIDNI
FSETPNLRKNRVIFVISAGETNYLDRKALKEEALRAKCLGYTIFVLSFGPMHNDKELEEL
ASPPLDHHLVQLGRIHKPDFDYIVRFVKPFLHSVRRAINQYPPADYTPNCINVTSSSPKK
LKEEHIIFLPFKRYEMEAENNDFSDEYDSEEHLVILEGNHSVNSGHVFDLIHELHRLFST
GEVSMNDQEAARSKENATFVEDEQKTNKDDEDIR
NT seq
8025 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtctaggattttcttttcagggaaaaagagtccaagcttaaaaacattctac
aagatgaagatgctgctaatctcactgaccttaatcatctgggctggaacatcagctgat
cagagccctggtcctgagtttgctgatgttgtgttcctggtggatagctctgatcacctg
gggagtacgtcctttccctttgtgagaaccttcataagcaagatgatcaacagtctgcct
attgaagctgacaagttccgtatcgcccttgcccagtacagcgatgatctacaccaggag
ttcctgctgaacaccttcaagactaagaaggcaatgtttgaccacctcaagaagaacttt
aactacattggtgggtccctgcgggtaggcaatgctctagagaaagtccacaagacctac
ttctcggggccagcaaatggaagagacaagaaattatttccccagattttagttgttttg
gcttcagccaaatctgaggatgatgtggtagggcctgcagaagccttacacagagatggg
gtagaaatcattgcactggggatacaagaggcttcagaagaaaacctaaaagccatggcc
acttctcagcatcactataaccttagggcagtcagaaacgttggaatgttttcaggcaac
atgaccaggatcattaaggagacaataaagcaaaaggcaagaatgcaagatgttgatgaa
gtagtatgtgaaagagattctgtggctgacattgtctttctattggatgagtccttggag
gtcagaggaaacttggaagaccttcagaggttcctggagaacatcacagcctccatggat
gtgagggcaggttgtaccaggataggcatgttgagattcagcgacagggcggaggtggtg
acttctctggaatctcgcatgagccacgcggagattgcacaggccattgggagcctctct
ctaagggatggaaaggcctatattgggaaagccttgaagaaggccagagaagaagtcttt
agccacagcaggaaggcccagggcgtgcgacagatagctgtcctggtcactcatagatca
tcagaagacgaggtgaacgaggcagctgaggaccttctcctgcagggtgtctccatattt
gccataggcattgaaggctacaacatcacccagttggaacagatagtgtcttaccctgta
gatcattatatttccatccagaagagctacacagacctggaaccttacagtgtcactttt
ctaaacaaactccagtatgaaatacagtacaggatgtctgtccaacgtgaacatactgaa
cgttacaggacaggctgcattgaaacagaaaaggccgatatctattttctcattgatggc
tcaggaagtgttaaaaactacttccaagaaatcaagaatttcatgattgaggtgacgcaa
atgtttattgttgccccagagaaggtccggtttggggcagtgcagtattcgaccagtagt
caagaggagtttggcattggcgtacattctaacaaggtgaacttaggcaaagccattctc
aatatccgacagatgggatacacgacaaatacaggagcagccctgaatttcatgctgcaa
gtgatacagggctccaagaggaagcagcccagcaacatcccctgtcatctccttgtcttg
acagatgggaagtctgatgataaagttacagaaccagccaagagactgagggaggaagat
gtcatcattcatgcaattggcgtcaaaggagccaacatacatgagctggaagacatagca
gggtcaaaggacagagttaaatttgtacataattttgactctttaaaaggcataaaggat
gaaattgttcagagcatctgccatgaaagagactgtaaagacaaaaaagcagacatcatg
tttctggtggatagttctgggagcatgggagctgctaccttcagcaaagtaaaagaattt
atgaaaaatctggtggataagtctcatattggcattgatcaaggacatgttggtgtcatt
cagttcagcaattttaccaagaaagaatttgggctcactgaacatatgaccaaaagtgac
atttttgatgcaattgacagaatgagtcctattggaagtaaaacctatacaggaaaagca
ctgagatttgtgtctgattactttgaacccttgaagggaggacgttctggtgtgaagaag
tttctcatcctcgtcactgatgggaaggcacatgacaaagttaaagaaccagctttagat
cttcggaataaaggagtcactatcctcttggttgcgatcttccgatcaaaatcacctcag
ctagaggatatcactggaaatgcaaacttggtttattatgttgagagttttgataaccaa
aagctacttgaagataagctggtttttgatatttgcactctcgatgaatgcaaacagatt
caaaagctagacattgtatttgtgctggatgattcctcgagcatcgaccctcatcagcat
cagagcatgataaactttacgatgcacttggtgaacaagtcggatgttggcagtgatggt
gttcaatttggagccctcaaatatgcagatgatcctgaaatcctcttctaccttaatacc
tacccgaccaaggaaggcgtcattaagggacttaactacttgaaaggaggagtgaacact
tacacagctaaggctctgaagaaatcccatgagctatttactgaggaaaaaggcagtcga
atcaacagcggtgtaaagcaaatgctcattgtgattactgatggggaatctcatgatagt
aaagatctcgaggccacagccaagacactaagagataagaacatcatcatttatggagtg
ggtgtagctgctgcttctgagaaagaactctttgatataacaggctcaaaagacaaatat
ttcatggtagacaattttgaaaaattggaagaaatttacctccccattgagaaaaaagct
tgtgacaattcacttgatgtttgtgacatgaaaaaagcagatatatttttcctttgcgat
ggctctgatttagtaactgagcaagagttcggcaaaatggtttattttttggcagacatt
attgattatcttgatgtttcatctgaaaacacgcatgttgggatgtcccagttaggcacc
cttcaccaggaaataatccaactgaatgataccttggataaaaatgagcggaaagctaaa
attttggctgctttaaagcgcaatggaagtcctcggctagaagttgcacttcgccacatg
aaggacacgtttgtttctgggagcaggctcgtggctggggtccctcagatactgtttgtt
gttctatctgggcagccaaagggaagcgtggctatggtgactgaggctgtggcaaaattg
agagagcttggcgtgtgtatcatagccttggggattgggaatgttcgaaatgatgaattt
ctccatatcacccacaatcctgagaagatcatcacagtgtctgattttgataacttgaag
aaagtagaggtgaaaaaaagggtcgcccgggaaatctgtcgcaactgtcagcaaaagagt
tgctttgtggatactcttgtgggctttgacatctcaacccatcggagagggcagaccttg
tttgagggtcaaccacaccttgaatcttaccttccaggcctcctagaatctattaattcc
ctaagaggtgtgagctgtggaagaaagacccaagttagtgtggcatttaaagtgaacact
gataccggttttgaacccaggttccaaatctatgcagaaacaatgatggaaaccctgaga
caggtcacagtcagtgggccgtctcaccttcaagtggctgatctagaatcactttggagt
gtatttaatcactctgaaaatcatggaaaggtgatactcattttttctgatggtctccag
catggggctaatgatctctggaggcttgaaaagaaatcagatgagctcagagaacaaggg
ctgatgggtttgttcgttgttgccctgaacaccacctctcatcatgatgacttttcaact
atggaatttggaaaaggatttgactacaggacacatttaagcattggcatgagagacttg
agtggcacactgaccaagtacctggacaatattgcagaaagacattgctgctgtgccctt
tgcaaatgttcaggggctccaggggctccaggatcaccaggatcgagaggcgcaaaggga
ttttggggtcagaagggcagccgagggcacacaggagaagagggagaacccgggatacga
ggaaacagtgggccagaaggagaaagaggtgctcagggatgtcagggtgataggggcctt
aagggagtcagaggaatggatggatttgagggagaagaaggagattatggaattgatggg
ataaatggagaagagggcttccatggaacttttgggaagaagggggagaaaggtgaccca
ggatcccagggaagtctgggtaccagaggcccccctggtgtccatggcggaaagggattt
ccgggagatcctggtgaacctggaaatgacaatttctccagagggcctaagggagccaaa
ggagagcaaggaagacaaggtcgaagagggcagaaaggcacagacggcgagcccaactcg
agaggagacataggaccaataggccgaagagggacccatggaccaaagggcctacgtggg
aacgttggcccgaagggcgaagacggacctgaaggattaagaggaactgagggacaaatt
ggaaatactggacagaagggagaaaaaggaagtcctggaaacaaagggcctcaggggtct
tctggatcagcagggactaaagggagtcctggaaaacctggaacattaggaaggaaggga
gaaccgggagttccaggtgataaaggaaccatggggccaaccggatcacgtggaatgcag
ggagacttgggcattgcaggctatggccgccagggaaggaaaggagcaaagggcccaaga
ggacaaccgggagacagtgggaaccagggtgatgttggtgacccaggaattcaaggggaa
gctggacctaaaggattcagaggactcgcatttggcccgggtccaaagggtgaaattggc
tttcctggcgctccgggacctgcggggccaaggggtcctaaaggcatgaagggacagcct
ctaagttcggaatgtgagcttcttaatttcctgagagatcatagtccctgttgggaaggc
aaatgccctgtctacccaacagaattggtatttgcattggatgtgtcaagacagagattt
gaatttgtgaaaaatatgaccatttccattgtgaaagaccttaaaatcagggaaaacaac
tgccccatgggagcaaaagttgctgtcctatcctacagttctgacagcaggtatcttgtc
cgctggtcagactattccagcaagcagcagctcctccagaagctctccagaatgacattt
caacgaccttcctatcctagagatcttggcgatgccatggtatttgtggccaggaatgtt
ttcaagcgaaccttaccaggacctaacgtcaggaggctcactgtgttttttagtgacaat
caatctccagatatatcctcgatcatcactgccaccatggagttcagtggcctcaatatc
attccagctgtatttgcttttaatgaaatgtttngccttgaggaggccttccagttcaat
gacactggcacctatcaggtcattccagttctaccctctcaattttctgagccaatagaa
agacttcgtcaatgcacactttgctatgataaatgcttcctaaatgtttgtgcagaagag
caagttgatcaaataaattcatacatggatgccctcttccttctggacagctcccggcac
gtgacaggagatgagtttgagcaaatgaaatcttttctgagctcggtgcttgacagcttt
gacatttctgaagacccttttcaatccaatgtaggtgatcggttggctttgctaagctat
tcaccaggggatttttccaggagaaggataagcacccctgtgaaggaagagtttgtcttt
accacctataacagcaaaaccctaatgaagaggtatatccaggattcccttaagcaactt
catggagaatcctttgtcggccatgccctgcaatggacaacagagagggtcttctccaat
acagagcagtcaaggaaaaacaaagtcatatttgttatatctgctggagaaaataatgaa
aaaaaggatgtcttaagggaaatggccctgagggctaaatgccaggggtatgtcatattt
gtgatttctctgggatccacacgagaagaagaagtagaagatatagccagcctccctcta
gatcatcatttgattcaacttggcagaattcacaaacccaatttggactatgctgtgcgg
ttcattaaaccttttgtctactcagtcagacgaggattcaacaaatacccccctacaaca
atggagagacaatgtaaactcatcttgtcagaaccatcattttttctaaacaggaataat
atttttacttctgacatttatgacatctcctctggtgaaaatgttttgttaagtgaagtg
gcaaggaatccagaacattccccaattttactggaagacaatcaaagtgaggaaatggtc
taccttccctaccaaatgttaatgccagaggaactgatagtgaaatatcctaaaacagtg
gggactgaagaaataaaaactcttacttcagaaagcatagtagacaatgcccaggatttg
gagtcagaggaaatgggtatgaagcctggctctacctatatggttttagagagtccatat
cttatagcaggcaaaccaatggatatggagatggtggacatggatttgaagcctgtctct
gcctatctgcctgtaggagacgataaccttggaggaaaagaagaatcaggcttccctttg
gaatctggcactctgtctccggaagatgtttttatggatgtagctttcctccttgactct
tcacggaatgtgggaagttctgagtttcaggaaataaaagaattgatagcttcagtattt
gactacttttacattgccccagatccggtgacctctcatataggagacagagtagccctt
ctgagctattccccccagggctatatgcccaacgcagaagaatgtccagtctacgtggag
tttgatttagttacttataacagtgtacatcaaatgaaaagccacgtgtgggaatctctt
cagccactgaatggtgaatcttttgttggacatgccctgaaatggacgatcgataacatc
ttctcagagacacccaacctgagaaaaaacagagttatctttgtgatatctgctggagag
accaattatttggaccgaaaagctttaaaggaagaagctctgagagccaagtgcctaggc
tacaccatctttgtgttgtcctttggccccatgcacaatgacaaagagctagaagagcta
gccagcccacccctggatcatcacttggtccagctgggaagaattcataaacctgacttt
gactatatcgtgaggttcgttaaaccatttctccattcggtcagacgtgcaatcaaccaa
tatccccctgcagattacactccaaactgtattaatgtgacctcttctagcccaaagaaa
cttaaggaagaacacatcatatttctcccttttaagagatatgagatggaggcagaaaat
aatgacttctctgatgaatatgattctgaagagcacctggtcattctggagggcaatcac
agtgttaactctggacacgtttttgacttgatccatgagctacaccgtctcttttctact
ggggaagtctcaatgaatgatcaggaagcagcacgttcaaaagaaaatgccaccttcgtt
gaagatgaacaaaaaactaacaaagatgatgaagacataagatga
DBGET
integrated database retrieval system
