Phascolarctos cinereus (koala): 110209535
Help
Entry
110209535 CDS
T05867
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcw03016
]
110209535 (TRUB1)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
110209535 (TRUB1)
Transfer RNA biogenesis [BR:
pcw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110209535 (TRUB1)
Prokaryotic type
110209535 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
110209535
NCBI-ProteinID:
XP_020843800
UniProt:
A0A6P5KE24
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MMAACEAVAAAAIVATATERAEEAAKAATTGTVASAAVSAKAAVLSSGGKKAAASAAVTE
TTAATTAAAGGAGAVRSAAAAKLLSLSGVFAVYKPKGPTSAELLNQLKEKLLAEAGMPPQ
DGNKRKKQALKIGHGGTLDSAATGVLVVGIGKGTKMLTSMLSGSKKYIATGELGKATDTL
DSTGKITEEKPYDQIKQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKKGEVVEA
KPARPVTVYSLSLQKFQPPLFTLDVECGGGFYIRSLVSDIGKELSSCATVQELTRTKQGP
FTLEEHALREDKWTIDGIAQSLERCMPLLSVEPSVKKLKTEDSKVQAASSEDKTISQVRE
KDGVIGTS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcctgcgaggcggtggcagcagcggcgatagtggcgacagcgacagaaagg
gccgaagaggcggcgaaagcagccaccacggggacggtcgcgtcggcggcggtctcagcc
aaggccgcggtgctgtcctctggggggaagaaggcagcagcctcggccgccgtgacggag
acgacggccgccacaacggccgcggcgggaggagcgggggccgtccgatcggcggcggcc
gccaagttgctgtccctgagcggcgtgttcgccgtgtacaaacccaagggccccacttca
gccgagctcctgaaccagctgaaggagaaactcctggcagaagctggtatgcctcctcaa
gatgggaacaagaggaagaaacaggcattaaaaattggtcacggaggtactttggacagt
gctgccacaggagttctggtggttggaattggaaaagggacaaaaatgttgaccagtatg
ttatcaggttctaagaagtatattgctactggagaattggggaaagctactgatacactg
gattcaacagggaaaattacagaagaaaaaccttatgatcagataaagcaagaagatatt
gaaggtattctccagaaatttacaggaaacataatgcaagtacctcctctctattctgct
ttaaagaaagatggacagagactttctactttgatgaagaaaggtgaagtagtagaggcg
aaacctgccagaccagtcacagtgtatagcctctcccttcaaaaattccagccaccttta
tttacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacatt
ggcaaagaactttcttcctgtgccactgtgcaagaattgacccgaactaaacagggacca
tttacactagaggaacatgctcttcgtgaagacaaatggacaattgatggaatagcacaa
tccctagagcgctgcatgcctcttctctcagtagaaccttctgttaaaaaattaaaaact
gaagattctaaagtacaagctgcaagctcagaagacaaaacaataagtcaggttagggaa
aaagatggagttattggaacatcttaa
DBGET
integrated database retrieval system
