Phascolarctos cinereus (koala): 110210157
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Entry
110210157 CDS
T05867
Symbol
SNED1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcw04990
]
110210157 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
pcw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
110210157 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
cEGF
NDNF
EGF_3
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
110210157
NCBI-ProteinID:
XP_020844646
UniProt:
A0A6P5KJN5
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MRGLARWTLLVALASWGHAFVPLADFYPFGSEVGDAVTPKQDDGGSGLLPISVPFPFFGA
GHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRCVVAAFWADVDNRRAGEVYYQESKEQA
ILQRATEDIWRYFPEHPDFSAKWVFVATWHKVTFFGGSSFSPVNTFQIVLITDGKLSFTI
FNYESILWTTGMHASSGGDLAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEMTTNV
GIPGRWVFRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIDDCITGNPSYTCSCLAGFTG
KKCHLDVNECASHPCQNGGTCTHSVNSFSCQCPPGFKGPTCGTVESPCDTKDCQNGGECQ
AGNGTAECVCQSGYTGENCEIDINECDSDPCMNGGKCVDLVANYTCLCSEPFLGPRCELD
QSSCEDRSCRDRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRIPSACLSNPCQNEGTCLE
TDQGYLCECPDGHTGSDCAEKLPEDCECRNGGRCLDGNFTLCHCPPGYFGILCEFEVTAT
PCNVNSQCPDGGYCMEYGGSYLCVCHTDYTTNHSLPSPCDSDPCLNGGSCNAHDDSYTCE
CPRGFLGKHCEKVRPRLCSSGPCRNGGTCKESNGEYRCSCPYRFTGKHCEIGKPDSCASG
PCQNGGTCFHYIGKYKCDCPPGYSGRHCEIAPSPCFMSPCENGATCNDLGKDYICRCRAG
YTGKRCQSEVDCGTPSSVKNTKVRFNSTKMGSLAEYECEQGYILSSENNPRVCRAHGLWS
EPPQCDEINECESQPCLNGGSCKDRIASFLCVCGSGYMGPHCELETDECQSDPCKNGGTC
KDLPAAFVCQCPDGFAGIHCEKEVDACDSGPCQHGGECENDGGSYLCVCPEGFFGYHCEI
ASDPCFSNPCGGRGYCLSSNGSHSCTCKVGYTGRNCAKELLPPTTLKVERVEDSGVSISW
RPPEXQAAKQMIDGYAVTYASFDGSYRRTDFVDRSHSAHQLRALASGKAYNISVFSVKRN
VNNXNDISRPVVLITRTRPRPVEGFEITNVTASSIAVQWALHKVKHSTVNKVRVSIRRLR
DQEDHVVELDSTTDKYTFWDLLPGERYIIHVATLSGLGTEDHPSESLATAPFHVWTRPLS
PRNLTASRVTATSAHMVWEQPPPGASVEGYIINVTTSQSVKSRYVPNGKLTSYTMRDLQP
GQRYRLSVTAVQNTEQGQMHSDPAHLYIMTSQRDASSDRRWSQGGHPRVLRNRVPPSFLP
DLRLLADREVSEEPSQPPRFTELVDGRGRISAKFGGVPSEAVALRSQPETPVKLENTEES
ADRISLALQLPEPESNKEEEDDHRNCSINPCQNGGTCVSGTDSYSCDCGLGFKGRHCELS
CKKVPHPCTRLYSETKSFPVWEGGVCHYVYKRIYKVHPDICYKESCEGTATKKTPSRKQS
NSQIVKKP
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcctggcccgctggacgctgctggtggcgctggccagctggggccacgcgttc
gtccccctggccgacttctacccgttcggctcggaggtgggggatgctgtcactccgaag
caggatgacgggggctcagggctgctacccatctctgtcccgttcccgttcttcggagcg
gggcacactggcctctacgtgaacaacaacggaatcatctccttcctaaaggaagtctcc
caattcacaccggtagccttccctatctctaaagaccgctgtgtggtagctgctttctgg
gctgatgtcgataaccgccgggctggagaggtctattaccaggagagtaaggagcaggcc
atcctgcagagagccacggaggacatctggagatacttcccagagcaccccgacttctca
gcaaagtgggtttttgtggccacctggcacaaggtgacctttttcggagggagctcattt
tctccggtaaacaccttccagattgtcctcatcacagatggcaagctgtcttttaccata
ttcaactatgagtccatcctgtggaccacaggcatgcacgccagcagtgggggcgacttg
gcgggactaggaggcattgccgcacaggcagggttcaatgctggcgatgggaaacgttac
ttcaacatccctggctcccgcaccgatgacatcgtcgacgtggagatgacgacaaatgtg
ggtatccccgggcgatgggtgttcagaatcgatgatgcccaggtgcaagtggggggctgc
agcaacacaacttctgtgtgtctgaccctccgtccctgtctgaatggagggaagtgtatt
gatgactgcattactgggaacccctcctacacctgctcctgccttgcaggcttcacaggg
aaaaaatgccacctggatgtgaatgagtgtgcctcccatccatgtcagaatggagggacc
tgtacacacagcgtaaacagtttcagctgccaatgccccccaggcttcaaagggcccacc
tgtgggacagtggaatccccatgtgacaccaaggactgtcagaatggtggagaatgccag
gctggaaatgggactgcagagtgtgtgtgccagtcagggtacacaggagaaaactgtgaa
atcgatataaatgaatgtgactctgacccatgcatgaatggggggaaatgtgtggacctg
gtggctaactacacctgcctgtgttcagagcccttccttggccctcgctgtgagttagat
cagtcatcctgtgaagatcggagctgcagagacaggcagacttgcaattacatccgccca
gggcgctacatctgcacgtgttctcctggctactatgggaacaactgtcagtatggaggc
cccagaatcccaagtgcctgtctctccaacccatgccagaacgagggcacctgcctggag
acagaccagggctacctctgcgagtgtccagatggacacacaggctccgactgtgcagaa
aagctcccagaagactgtgaatgccggaatggggggagatgcctcgatggaaacttcacc
ctctgccactgccccccgggatattttggaatcctttgtgaatttgaagtcaccgccacc
ccgtgcaatgtgaacagccagtgtcctgacggcggttactgcatggagtacggcgggagc
tacctctgcgtgtgccacaccgactacaccaccaaccactctctgccctctccctgcgac
tcagatccctgcctcaatgggggctcctgcaatgcccatgacgactcctacacctgcgag
tgcccacgaggcttcctcggcaagcactgtgagaaagtaaggccgagactgtgcagctcc
gggccctgccggaacggcgggacctgcaaggagtccaacggggaataccgatgcagctgc
ccctatcggttcacagggaagcactgtgagataggaaagccagactcttgtgcctctggc
ccttgtcagaacggagggacctgcttccattacattggcaaatacaagtgcgactgtcca
ccagggtattccgggcggcactgtgaaatagctccctctccttgctttatgagcccctgc
gaaaatggtgccacctgcaacgatcttggcaaagactacatctgccgctgccgtgctggg
tacactgggaaacgctgccagtcagaggtggactgcggtactcccagctcagtgaagaac
accaaagtgagatttaactccaccaagatgggctccctggctgaatacgagtgtgagcag
ggctacatcctcagctctgagaacaaccccagagtgtgcagagcacacggactctggagc
gaacccccacagtgtgatgaaatcaatgagtgtgaatctcagccttgcctgaatgggggc
tcctgcaaggaccggatcgccagcttcctctgcgtctgtggctcaggatacatgggaccc
cactgtgagctggagactgatgaatgccagtcagatccctgtaaaaatggagggacctgc
aaggatctcccagctgcctttgtctgccaatgtcccgatggctttgctggaatccactgt
gaaaaagaagtggacgcctgtgactcagggccctgtcagcacggaggagagtgtgagaat
gatggaggctcttatctgtgtgtctgccctgaaggtttctttggttaccactgtgagata
gcaagcgatccatgtttctccaacccctgtggaggccgaggttactgtctctccagcaac
gggtcccacagctgcacctgcaaagtgggctataccggcagaaactgcgccaaagagctg
ctgccacccacaacgctcaaggtggaaagggtggaggacagcggtgtctccatctcctgg
cgtcccccggagnaccaagcagccaagcagatgattgatgggtacgcggtgacctacgcc
tccttcgacggctcctaccgccggaccgattttgtggatcgcagccactctgcccaccag
ctgcgggccctggcctcgggcaaagcctacaacatctccgtcttctcagtcaaacgcaac
gtgaacaacnaaaatgatatcagcagacctgtggtgctcatcacccgcactcggcctcgg
cctgtggagggctttgagatcaccaatgtgacagcctcgtcgatcgcagtccaatgggcc
ctccacaaggtcaagcactctactgtcaacaaagtgcgcgtgtctatccgccgcctcagg
gatcaagaggaccatgttgtggagctggacagtaccactgacaagtacacattctgggat
ctgctgccaggagagaggtacattattcatgtggccaccctcagtgggctgggcacagaa
gaccatccctcagagagcctggccactgcacccttccacgtgtggactcgtcctctctca
cccagaaacctgacagcttcaagagtcacagctacttctgcccacatggtgtgggagcag
ccacctccaggggcttctgtggagggttacatcatcaacgtgaccacaagccagagcgtg
aagagccgctatgtgcccaacgggaagctgacctcctacaccatgcgcgacctgcagcca
ggtcaaaggtatcgactctcagtgactgcggtacagaacacagagcaagggcaaatgcac
agcgaccctgcccatctatacattatgacctcacagagggatgcctcttctgacagaaga
tggagccaaggagggcaccccagggtgctgaggaacagagtgcccccatcctttctgcct
gatcttcggctgctggctgaccgtgaggtttcagaagaaccatcccagccccccaggttc
actgagctggtggatggcagaggaaggatcagcgccaaattcggaggtgtcccgagtgaa
gcggtcgccctgagatcccaaccagagaccccagtaaaactggagaacacggaagaatct
gccgaccggatcagcctggcactccagctgcctgaacccgaaagcaacaaagaggaagaa
gatgaccacaggaactgctccataaacccctgccaaaatggcggcacatgtgtgagtggg
acagactcctacagctgtgactgcggccttggattcaaaggcagacactgtgaactctca
tgtaagaaggtgccgcatccttgtacacggctgtactcagagaccaagtcatttcctgtc
tgggaaggaggagtctgccactatgtgtacaagagaatctacaaagtccatcccgacatc
tgctacaaggagagctgcgagggcacagctaccaagaagacccccagcaggaaacaaagc
aacagtcaaatagttaagaagccttaa
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