| Entry |
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| Symbol |
SMARCC2
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| Name |
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
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| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
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| Organism |
pcw Phascolarctos cinereus (koala)
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| Pathway |
| pcw03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:pcw00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110210921 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110210921 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110210921 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pcw03021]
110210921 (SMARCC2)
03036 Chromosome and associated proteins [BR:pcw03036]
110210921 (SMARCC2)
Transcription machinery [BR:pcw03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110210921 (SMARCC2)
Chromosome and associated proteins [BR:pcw03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110210921 (SMARCC2)
PBAF complex
110210921 (SMARCC2)
GBAF(ncBAF) complex
110210921 (SMARCC2)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1260 aa
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWPEPCHSLGSCLPTR
RRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLARPNIFLHPEIDLKLLGKLKDIIKRHQGT
VTEDKNNASHIVCPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVE
DAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDS
DRRDKKGSNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEP
SPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDESSTGNKGEQ
TKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYR
NFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPP
PTSHFHVLADTPSGLVPLQPKTPQGRQVDADNKAGRKGKELDDLVPETAKGKPELQTSAS
QQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEM
YKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMS
TVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKMTGKADPSFGL
ESSGIAGTTSDEPDRIEESGADETRAEGQVSEEKKEPKELREGGAAAEEEVKDKPSEGPK
KEEEKGKEGDIEKESEKSDGDPMADQEKEKEPKEGQEEVLKDVVEAEGERKTKVERDIGE
GNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDR
EREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPNLPPGSQPVPPT
GASVPPPAHSLAVAPPSVAPTPAGTGAPPGGLAPTEQMGQTGSASGSQQLQPAGAPQPGT
IPPGALPTGPHGPSPFPSQQTPPSMIPGAVPGSGHPSVAGNAPLGLPFSMPPPPLPPPPS
SIIPFSSLADSININLPPPPNLHGHHHHLPFAPGTLPPPNLPVSMASPLHPNLPATTTMP
SSLPLGPGLGSAAAQSPAIVAAVQGNFMPSASPLPDPGTPIPPDPTAPSPGTVTPVPPSQ |
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| NT seq |
3783 nt +upstreamnt +downstreamnt
atggcggtgcggaagaaggatggcggccccaacgtgaagtactacgaggccgcagacacc
gtgacccagtttgataacgtgcggctctggctcggcaagaactacaagaagtatatccaa
gctgaaccacccaccaacaagtccttgtctagcctagtggtacagttgctacagttccag
gaggaggtatttggcaaacacgtgagcaacgcaccacttaccaagcttccgatcaaatgt
ttcctagatttcaaagcaggaggttccctgtgtcatatccttgcagctgcttacaagttc
aagagcgaccagggatggcctgagccatgccactcactgggctcttgccttcccacaagg
cggcgttacgatttccagaatccatcccgcatggaccgaaatgtggaaatgttcatgacc
attgagaagtcccttgtgcagaataactgcttggctcgacccaatattttcctacaccct
gagattgaccttaagctgctagggaaattgaaggacattatcaaaagacatcagggaaca
gtaactgaagataagaacaatgcctcccatatagtatgccctgttcctgggaacctggag
gaagaggaatgggtacggccagtcatgaagagggacaaacaagttcttctgcactggggc
tactatcctgacagttatgacacctggattccagcaagtgaaattgaagcttctgtggaa
gatgcacccacacctgagaaaccaaggaaggttcatgcaaaatggattttggacacggat
actttcaacgagtggatgaatgaagaagactatgaagtgaatgatgacaaaaaccctgtg
tctcgccgtaagaagatctcagctaagacactgacagatgaggtgaacagcccagattca
gacaggcgggacaagaagggtagtaactacaagaaaagaaagcgttctccctccccttct
ccaacccctgaagccaaaaagaaaaatgcaaagaagggcccctcaacaccttatactaag
tcaaagcgtggacatcgagaagaagagcaagaggatttgaccaaggacatggatgaaccc
tcaccagtccccaatgtggaggaagtgacactgcccaagacagtcaataccaaaaaggac
tcagagtcggcaccagttaaaggaggcaccatgactgatcttgatgaacaggaggatgag
agcatggagaccacagggaaggatgaggatgagagcagcactggcaacaagggcgaacag
acgaagaaccctgacctccatgaggacaacgtgaccgagcagactcaccacatcatcatc
cctagctatgcagcctggtttgactacaatagcgtccacgctattgagaggagggctctg
ccagaattcttcaatggcaagaacaaatccaagaccccagaaatctacttggcctatcga
aacttcatgattgacacctatcgactgaaccctcaggagtacctcacctccactgcctgc
cgccggaacctggcaggtgatgtctgtgccatcatgagagtccatgctttcctggaacag
tggggtctaatcaactaccaggtggatgcagagagccgaccaactcccatgggaccccct
cccacttctcacttccatgtcctagctgacacaccctcagggctggtaccactgcagccc
aagacaccccagggccgccaggttgatgctgacaataaggctgggcgaaaaggcaaagag
ctagatgacctggtaccagagacagctaagggaaagccagaactgcagacctcagcttcc
cagcagatgcttaactttcctgacaaaggcaaagagaaaccaacagacatgcagaacttt
ggactacgaacagatatgtacaccaaaaagaacgtaccctccaagagcaaagccgcagcc
agtgcaacccgtgagtggacagaacaggagacgctacttcttttggaggcactggagatg
tacaaagacgactggaacaaggtgtcagaacatgtagggagtcgcacacaggatgaatgc
atactgcacttcctccgtttgcccattgaggacccatacctagaggactcagaggcctca
ctggggccccttgcctaccagcctatccccttcagccagtctggtaaccccgtcatgagc
actgttgccttcctggcctctgtggttgacccccgagtggcttctgctgctgccaagtca
gccttagaagagttctccaagatgaaagaagaagttcccacagccctggtggaggcccat
gttcgcaaggtggaagaagcagccaaaatgacaggcaaggcagacccatcctttggtttg
gagagtagtggcattgcaggaaccacctctgatgaacctgatcggattgaagagagtgga
gctgatgagactcgggcagaaggccaagtctcagaggagaaaaaagagcctaaggaacta
cgggaaggaggtgccgccgcagaggaagaagtaaaggataaaccaagtgaaggacccaaa
aaggaggaagagaaggggaaggaaggtgacattgagaaagagtcagagaagagtgatggg
gaccccatggctgaccaggaaaaagagaaggagccaaaggaagggcaggaggaggtgcta
aaggatgtggttgaggccgagggtgagaggaaaaccaaggtagagcgggacattggtgaa
ggcaacctctccactgcagccgctgctgccttggcagcggctgctgtaaaagccaagcac
ttggctgcagttgaagagaggaagatcaagtccctggtggccctgctagtagagacccag
atgaagaagctggagatcaaacttcggcactttgaagagctggagactatcatggaccgg
gagcgagaggccctggagtaccagaggcagcagctcctggctgacagacaggccttccac
atggaacagctgaagtatgcagagatgagggcacggcaacagcatttccagcaaatgcac
caacagcaacagcagcctcccccaaacttaccccctggctcccagccagtaccacccaca
ggagcctctgtgccaccccctgcccacagcttggctgtggctccaccctctgtggcccct
actcctgctggtactggggcccctcctggcggcttggcccccactgaacagatgggacag
acagggtcagcctcagggtcacaacagctacaaccagctggagctccccagccggggaca
atcccacctggagcactccccactggaccccatggcccctcaccgttccctagccaacaa
actcctccctcaatgataccaggggcagtgccaggcagtgggcacccaagtgtggccggt
aatgctcctttgggtttgcctttcagcatgccacctcctcctcttcctcctcctccatca
tccatcatcccatttagtagcctagctgattccatcaatattaacctccctcctcctcct
aacctgcatgggcatcaccaccatctcccgtttgccccgggaaccctccccccacctaac
ctgcctgtgtccatggcgagccctctacatcctaacctgccggcgaccaccaccatgcca
tcctccttgcctctcgggccagggctgggatccgctgcagcccagagccctgctattgtg
gcagctgttcagggcaacttcatgcccagtgccagcccactgccagacccaggcacccca
atacccccagaccccacagcccccagcccaggcacggtcaccccagtgccaccttcgcag
tga |
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