Phascolarctos cinereus (koala): 110211698
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Entry
110211698 CDS
T05867
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03440
Homologous recombination
pcw03450
Non-homologous end-joining
pcw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110211698 (RAD50)
03450 Non-homologous end-joining
110211698 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
110211698 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcw03032
]
110211698 (RAD50)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110211698 (RAD50)
DNA replication proteins [BR:
pcw03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110211698 (RAD50)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110211698 (RAD50)
BRCA1-C complex
110211698 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
110211698 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
110211698
NCBI-ProteinID:
XP_020846793
UniProt:
A0A6P5KRH7
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSIMGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYVSTGDFPPG
TKGHTFVYDPKIAQETDVKAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRSVRHNQSLRVKECQTELKYLKQNKEKACEIRDQIVSKEAQLASSKEF
VKSYDNELGPLKTHLKEIEQNLSKIVRLDNDIKALESRKKQMEKDNNELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELDRTNKESKLLNHEKSELLVEQGRLQLQADRH
QQNIRARDSLIQSLATHLELDGYERAPFNERQIKNFQKLVKDIEERETETNRRMMNDFAG
KESMKQKQIDEIRDKKTGLERIIELKLEIQNKKQTELKNVKYELQELEGSSDRILELDQE
LGKTELELGKAEENSNIAALKEEVPALLREKGDLDRSLRKLDQEMEQLNLHTMTRTQMEM
LTRDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKFNKE
LASAEQNKNHINNELKQKEEQLSKYEDKLFDVCGSQDFESDLDKLMDEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RREKRRDEMMGLKPIRQNIIDLKEREIPELRNKLQNVNRDIQHLKGEIEEQETLLGTLIP
EEESAKACLTDVTIMERLQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLD
TVSSKIELNRKLVQDQQEQIQHLKSTVNELKSEKLQISSNLQRRQQLEEQTVELSTEVQS
LHREIKDSKEQLCPLEATLGKLQQEKEELINKKNTNNSAVQEKLNDIKEKVKNISSYMKD
IENYIQDGKDSYKMQKEAELNKVISQLNECEKQKDKISKEMGTVRQDIDMQKVQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQLKNEYQTLEEKIETLKRNHSLALGRQKG
YEEEILHFKRELREPQFSDAEEKYREMMIVMRTTELVNKDLDIYYKALDHAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYVEIRSDTDENVSASDKRRNYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLVVITHDEDFVELLGRSEYVEKFYRIRKNIDQCSEIIKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgaaaagatgagcattatgggtgtgaggagttttggaatagaggacaag
gataagcaaattatcactttcttcagtcctttaacaattttggttggacctaatggtgca
ggcaagacgaccatcattgaatgtctgaagtatgtttctactggagattttcctcctggt
accaaaggacatacatttgtttatgatccaaagattgctcaagagacagatgttaaagct
cagattcgtctacagtttcgtgatgtcaatggggaacttgtagctgtacagaggtcaatg
gtgtgtactcagaagagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgaaaaggtcagcctcagctctaagtgtgcagagatcgaccgagagatg
atcagttccctaggtgtttccaaatctgtgctcaataatgtcattttttgccatcaagaa
gattccaattggcctttaagtgaagggaaagccctgaaacaaaaatttgatgaaatcttt
tcagcaacaaggtatattaaagccttggagacacttcgttcagtgcgtcacaaccagagc
cttcgggtaaaggaatgtcaaactgaactaaagtacctgaaacagaataaggagaaagct
tgtgagattcgagaccagattgtcagcaaggaagctcaattggcatcttctaaggagttt
gtcaagtcctatgataatgagcttggaccgttgaagactcatctaaaagaaattgaacag
aatctttctaaaatagtgaggcttgacaatgacattaaagctctggagagtagaaagaag
caaatggaaaaggacaacaatgaactagagcagaaaatggagaaggtatttcaagggact
gatgaacagctaaatgatttgtaccataatcaccagagaacagtgagagaaaaggaaagg
agactgattgactgtcagcgagagctagacagaacaaataaagagtctaagctgctgaat
catgaaaaatcagaactccttgtggaacaaggtcgtctacaactacaagcagatcgccat
cagcagaacatccgagctagagattcattaatacagtctttggcaacacatttagaatta
gatggttatgagcgagcaccatttaatgaacgacaaattaaaaattttcagaagcttgtg
aaggacatagaagaaagggaaacagaaactaataggcgaatgatgaatgactttgcagga
aaagaaagtatgaaacaaaaacagatagatgaaataagggataagaaaactggcctggaa
agaataattgaactgaaattagaaattcaaaataagaaacagactgaactgaaaaatgta
aaatatgaactgcaagagctagagggatcttcagacagaattcttgaactggaccaggaa
ctcggaaaaaccgaacttgaacttggtaaggcagaggaaaacagtaacatagcagcactg
aaagaagaagtaccagcactactaagggagaaaggagacctggacagaagccttcgtaaa
ttagaccaggagatggaacaattaaacctacacaccatgacgcgaacccagatggaaatg
ttgaccagagacaaagctgacaaagatgaacaaataagaaaaataaaatccagacacagt
gatgaattaacttcattgttaggctattttcccaacaaaaagcaacttgaagactggctt
catagtaaatctaaagaaattaatcagacaagggacagacttgccaaatttaataaagaa
ctagcttcggcagaacaaaataaaaatcacatcaataatgaactcaagcaaaaggaagaa
cagttgtccaaatatgaagacaaactatttgatgtttgtgggagtcaagattttgaaagt
gatttagacaaactaatggatgaaattgaaaagtcttctaaacaacgagcaatgcttgct
ggagccacagcagtttactcccagtttattactcagctaactgatgaaaaccagtcatgt
tgccctgtgtgtcaaagagtctttcagacagaggctgaactacaagatgtgataagtgat
ttgcaatccaagctacgcttggctccagacaaactcaagtcaacagaatctgagctgaag
agaagagaaaaaaggcgtgatgaaatgatgggtcttaaaccaataaggcaaaacataatt
gatttgaaggaaagagaaataccagaattgaggaataaactacagaatgtgaacagggac
atacagcatctaaagggtgaaatagaagaacaagagactctcttaggtactttaatacct
gaagaggaaagtgctaaagcatgtttaacagatgttactatcatggaaaggttacagatg
gagcttagagatgttgaacgaaaaattgcacagcaagctgctaagctacaaggcgtagat
ttggatcgaactgttcaacaagtaaaccaagaaaagcaagaaaaacagcatagattggat
acagtctccagcaaaattgagttgaatcgtaagcttgtacaggaccagcaagagcaaatc
caacacctaaaaagtacggtcaatgaacttaaatcagaaaaacttcagatatctagtaat
ctgcaacgtcgacagcaactggaggagcagacagtcgaattgtccacagaagttcagtcc
ttacatcgagaaataaaagattcaaaagagcagctgtgtcctttggaagccacgctggga
aaattgcagcaagaaaaagaagaattaattaacaaaaagaatacaaataacagtgcagta
caggaaaaattaaatgatatcaaagagaaggttaaaaacatctctagttatatgaaagac
attgagaactatattcaagatggaaaggacagctacaaaatgcaaaaagaagctgaactc
aataaagtaataagtcagctaaatgaatgtgaaaaacaaaaagacaagataagtaaggaa
atgggaacagtgagacaagacatagatatgcaaaaggtgcaggaaaggtggctacaagat
aaccttactctgaggaagagaaatgaggaactgaaagaggttgaagaagaaagaaagcaa
cacttaaaggagatgggacaaatgcaggttttacagctgaaaaatgaatatcagacatta
gaagaaaaaatagaaacactgaaaagaaatcacagtttagcattaggacgacaaaaaggc
tacgaggaagaaattcttcattttaagagagaactgcgggaacctcagttttctgatgct
gaggaaaagtacagagaaatgatgattgtgatgagaacaacagaacttgtgaacaaggac
ctcgacatttattacaaggcattggaccatgcaataatgaagtttcatagcatgaaaatg
gaagagatcaataaaattattcgtgatctctggcgaagtacctaccgaggccaagatatt
gaatatgttgaaattcggtctgatacagatgaaaacgtatcagcttctgacaaaaggagg
aattacaactatagagtagtaatgataaaaggagatacagccttggatatgcgaggacgg
tgcagtgctgggcaaaaggtgcttgcttctcttatcattcgcttggccctcgcagaaacc
ttctgtttgaactgtggcattcttgctttggatgagcctacaacaaacctcgatagagag
aatattgaatctcttgcacatgccctggtggaaataataaagagtcgttcccagcagcgc
aacttccagcttgttgtgatcacccacgatgaagactttgtggagcttttgggtcgttct
gagtatgtggagaaattctacaggattagaaagaacattgaccaatgctcggagataatc
aaatgtagtgtcagctccctgggctcttatgttcattaa
DBGET
integrated database retrieval system