KEGG   Phascolarctos cinereus (koala): 110211698
Entry
110211698         CDS       T05867                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03440  Homologous recombination
pcw03450  Non-homologous end-joining
pcw04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110211698 (RAD50)
   03450 Non-homologous end-joining
    110211698 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    110211698 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcw03032]
    110211698 (RAD50)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110211698 (RAD50)
DNA replication proteins [BR:pcw03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    110211698 (RAD50)
DNA repair and recombination proteins [BR:pcw03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     110211698 (RAD50)
    BRCA1-C complex
     110211698 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     110211698 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 DUF2703 AAA_29 AAA_13
Other DBs
NCBI-GeneID: 110211698
NCBI-ProteinID: XP_020846793
UniProt: A0A6P5KRH7
LinkDB
Position
Unknown
AA seq 1312 aa
MSKIEKMSIMGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYVSTGDFPPG
TKGHTFVYDPKIAQETDVKAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRSVRHNQSLRVKECQTELKYLKQNKEKACEIRDQIVSKEAQLASSKEF
VKSYDNELGPLKTHLKEIEQNLSKIVRLDNDIKALESRKKQMEKDNNELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELDRTNKESKLLNHEKSELLVEQGRLQLQADRH
QQNIRARDSLIQSLATHLELDGYERAPFNERQIKNFQKLVKDIEERETETNRRMMNDFAG
KESMKQKQIDEIRDKKTGLERIIELKLEIQNKKQTELKNVKYELQELEGSSDRILELDQE
LGKTELELGKAEENSNIAALKEEVPALLREKGDLDRSLRKLDQEMEQLNLHTMTRTQMEM
LTRDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKFNKE
LASAEQNKNHINNELKQKEEQLSKYEDKLFDVCGSQDFESDLDKLMDEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RREKRRDEMMGLKPIRQNIIDLKEREIPELRNKLQNVNRDIQHLKGEIEEQETLLGTLIP
EEESAKACLTDVTIMERLQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLD
TVSSKIELNRKLVQDQQEQIQHLKSTVNELKSEKLQISSNLQRRQQLEEQTVELSTEVQS
LHREIKDSKEQLCPLEATLGKLQQEKEELINKKNTNNSAVQEKLNDIKEKVKNISSYMKD
IENYIQDGKDSYKMQKEAELNKVISQLNECEKQKDKISKEMGTVRQDIDMQKVQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQLKNEYQTLEEKIETLKRNHSLALGRQKG
YEEEILHFKRELREPQFSDAEEKYREMMIVMRTTELVNKDLDIYYKALDHAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYVEIRSDTDENVSASDKRRNYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLVVITHDEDFVELLGRSEYVEKFYRIRKNIDQCSEIIKCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtctaagattgaaaagatgagcattatgggtgtgaggagttttggaatagaggacaag
gataagcaaattatcactttcttcagtcctttaacaattttggttggacctaatggtgca
ggcaagacgaccatcattgaatgtctgaagtatgtttctactggagattttcctcctggt
accaaaggacatacatttgtttatgatccaaagattgctcaagagacagatgttaaagct
cagattcgtctacagtttcgtgatgtcaatggggaacttgtagctgtacagaggtcaatg
gtgtgtactcagaagagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgaaaaggtcagcctcagctctaagtgtgcagagatcgaccgagagatg
atcagttccctaggtgtttccaaatctgtgctcaataatgtcattttttgccatcaagaa
gattccaattggcctttaagtgaagggaaagccctgaaacaaaaatttgatgaaatcttt
tcagcaacaaggtatattaaagccttggagacacttcgttcagtgcgtcacaaccagagc
cttcgggtaaaggaatgtcaaactgaactaaagtacctgaaacagaataaggagaaagct
tgtgagattcgagaccagattgtcagcaaggaagctcaattggcatcttctaaggagttt
gtcaagtcctatgataatgagcttggaccgttgaagactcatctaaaagaaattgaacag
aatctttctaaaatagtgaggcttgacaatgacattaaagctctggagagtagaaagaag
caaatggaaaaggacaacaatgaactagagcagaaaatggagaaggtatttcaagggact
gatgaacagctaaatgatttgtaccataatcaccagagaacagtgagagaaaaggaaagg
agactgattgactgtcagcgagagctagacagaacaaataaagagtctaagctgctgaat
catgaaaaatcagaactccttgtggaacaaggtcgtctacaactacaagcagatcgccat
cagcagaacatccgagctagagattcattaatacagtctttggcaacacatttagaatta
gatggttatgagcgagcaccatttaatgaacgacaaattaaaaattttcagaagcttgtg
aaggacatagaagaaagggaaacagaaactaataggcgaatgatgaatgactttgcagga
aaagaaagtatgaaacaaaaacagatagatgaaataagggataagaaaactggcctggaa
agaataattgaactgaaattagaaattcaaaataagaaacagactgaactgaaaaatgta
aaatatgaactgcaagagctagagggatcttcagacagaattcttgaactggaccaggaa
ctcggaaaaaccgaacttgaacttggtaaggcagaggaaaacagtaacatagcagcactg
aaagaagaagtaccagcactactaagggagaaaggagacctggacagaagccttcgtaaa
ttagaccaggagatggaacaattaaacctacacaccatgacgcgaacccagatggaaatg
ttgaccagagacaaagctgacaaagatgaacaaataagaaaaataaaatccagacacagt
gatgaattaacttcattgttaggctattttcccaacaaaaagcaacttgaagactggctt
catagtaaatctaaagaaattaatcagacaagggacagacttgccaaatttaataaagaa
ctagcttcggcagaacaaaataaaaatcacatcaataatgaactcaagcaaaaggaagaa
cagttgtccaaatatgaagacaaactatttgatgtttgtgggagtcaagattttgaaagt
gatttagacaaactaatggatgaaattgaaaagtcttctaaacaacgagcaatgcttgct
ggagccacagcagtttactcccagtttattactcagctaactgatgaaaaccagtcatgt
tgccctgtgtgtcaaagagtctttcagacagaggctgaactacaagatgtgataagtgat
ttgcaatccaagctacgcttggctccagacaaactcaagtcaacagaatctgagctgaag
agaagagaaaaaaggcgtgatgaaatgatgggtcttaaaccaataaggcaaaacataatt
gatttgaaggaaagagaaataccagaattgaggaataaactacagaatgtgaacagggac
atacagcatctaaagggtgaaatagaagaacaagagactctcttaggtactttaatacct
gaagaggaaagtgctaaagcatgtttaacagatgttactatcatggaaaggttacagatg
gagcttagagatgttgaacgaaaaattgcacagcaagctgctaagctacaaggcgtagat
ttggatcgaactgttcaacaagtaaaccaagaaaagcaagaaaaacagcatagattggat
acagtctccagcaaaattgagttgaatcgtaagcttgtacaggaccagcaagagcaaatc
caacacctaaaaagtacggtcaatgaacttaaatcagaaaaacttcagatatctagtaat
ctgcaacgtcgacagcaactggaggagcagacagtcgaattgtccacagaagttcagtcc
ttacatcgagaaataaaagattcaaaagagcagctgtgtcctttggaagccacgctggga
aaattgcagcaagaaaaagaagaattaattaacaaaaagaatacaaataacagtgcagta
caggaaaaattaaatgatatcaaagagaaggttaaaaacatctctagttatatgaaagac
attgagaactatattcaagatggaaaggacagctacaaaatgcaaaaagaagctgaactc
aataaagtaataagtcagctaaatgaatgtgaaaaacaaaaagacaagataagtaaggaa
atgggaacagtgagacaagacatagatatgcaaaaggtgcaggaaaggtggctacaagat
aaccttactctgaggaagagaaatgaggaactgaaagaggttgaagaagaaagaaagcaa
cacttaaaggagatgggacaaatgcaggttttacagctgaaaaatgaatatcagacatta
gaagaaaaaatagaaacactgaaaagaaatcacagtttagcattaggacgacaaaaaggc
tacgaggaagaaattcttcattttaagagagaactgcgggaacctcagttttctgatgct
gaggaaaagtacagagaaatgatgattgtgatgagaacaacagaacttgtgaacaaggac
ctcgacatttattacaaggcattggaccatgcaataatgaagtttcatagcatgaaaatg
gaagagatcaataaaattattcgtgatctctggcgaagtacctaccgaggccaagatatt
gaatatgttgaaattcggtctgatacagatgaaaacgtatcagcttctgacaaaaggagg
aattacaactatagagtagtaatgataaaaggagatacagccttggatatgcgaggacgg
tgcagtgctgggcaaaaggtgcttgcttctcttatcattcgcttggccctcgcagaaacc
ttctgtttgaactgtggcattcttgctttggatgagcctacaacaaacctcgatagagag
aatattgaatctcttgcacatgccctggtggaaataataaagagtcgttcccagcagcgc
aacttccagcttgttgtgatcacccacgatgaagactttgtggagcttttgggtcgttct
gagtatgtggagaaattctacaggattagaaagaacattgaccaatgctcggagataatc
aaatgtagtgtcagctccctgggctcttatgttcattaa

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