Phascolarctos cinereus (koala): 110211736
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Entry
110211736 CDS
T05867
Symbol
DDX46
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110211736 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110211736 (DDX46)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110211736 (DDX46)
Spliceosome [BR:
pcw03041
]
Complex A
U2 snRNP components
U2 related factors
110211736 (DDX46)
Complex B
110211736 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
110211736
NCBI-ProteinID:
XP_020846889
UniProt:
A0A6P5KPR3
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRTKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGKNKKAENRSRSK
EKTDGIDVSKDKKKEKDDKEEEKEKDVSNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEEEPAEGEKEGNEIEDEELDPLDAYMEEVKEEVKK
FNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKATVESEKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMSQDEVNIFRLEMEGIT
VKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMSGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIE
EENKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYT
FITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFD
ETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAP
TAGNAEKLEIAKRLALRINAQKNLGAEAQDVMQQATNAILRGGTILAPTVSAKTIAEQLA
EKINAKLNYVPIEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISEY
SEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQ
PTNKGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacggcactacaggaaacgatcagcttcccggggtcgatctggaagc
cgatctaggagtcgttctccatctgataaaagaactaaacgtggagatgacagacgctca
agaagcagagaccgagatagaaggcgagaaagatctcgaagtagggataagagaaggtct
cgatcccgagacagaaaacgcttgagacggtcaagaagtagagaaagagagagaagcaga
gagaggagacgatctcgaagtcgagacaggagacgatcaagaagcagaagccgaggaagg
agatcacggtcatctagtcctggcaaaaataagaaagcagagaataggtcaaggtctaaa
gagaaaacagatggtatagatgtttccaaagacaagaaaaaagaaaaagatgacaaggaa
gaagaaaaggaaaaagatgttagcaactttgaccagaataagttggaagaggaaatgaga
aaacggaaagagagagtggaaaaatggagggaagaacagcgtaaaaaagcgatggaaaat
ataggagaactgaaaaaagaaattgaagagatgaagcaggggaaaaaatggagtcttgaa
gatgatgatgatgatgaagaagagcctgcagaaggagaaaaggaagggaatgaaatcgaa
gatgaagaattagatcctttagatgcatacatggaggaagtaaaagaggaggtcaagaaa
tttaatatgaggagtgttaaaggtggtgggggaagtgagaagaaatcaggaccaactgtt
acgaaagttgtcactgttgtgacaactaaaaaggctactgtagaatctgaaaagaagaaa
ggagaactcatggagaatgaccaggatgcaatggagtattcatcagaagaagaagaagtt
gatcttcagacagccctaacagggtatcagaccaaacagaggaagctcctagaaccagtt
gatcatggaaaaattgaatatgaaccatacagaaaaaacttttacgttgaagttccagag
ctggcaaaaatgtctcaggatgaggtgaatatatttcggttggaaatggaaggcattaca
gtcaagggaaaaggctgccccaaaccaataaaaacttgggtccagtgtggaatttcaatg
aagatattaaattccctcaaaaaacatggttatgaaaagcctacaccaatccaggcccaa
gccataccagctatcatgtcgggacgagatttgattggcattgccaaaacaggaagtgga
aagacgattgcttttctcttacccatgtttagacacatcatggatcaaagggctttagaa
gaaggagagggtccgatagctgtcatcatgactccaactagagagctggctttacagatt
actaaagaatgtaagaagttttcaaagacattgggccttagagttgtatgtgtctatgga
gggacaggaatcagtgaacagattgccgaactgaaaagaggtgctgaaattattgtttgc
acaccgggtcgaatgatcgacatgttagcagctaatagtggtagggtgacaaatcttcga
agagtaacatatgtagttcttgatgaagcagatagaatgtttgacatgggttttgagcca
caggtcatgcgcattgtggataacgtcagacctgatcggcaaactgttatgttttctgcc
actttccctagagcaatggaggctttggcccgtcggatcctgagtaaaccaattgaagta
caggttggaggcagaagtgtggtttgctctgatgttgaacaacaggtgattgtaattgaa
gaagaaaacaagtttctgaagttacttgagcttctaggccattaccaggagtcaggatct
gttatcatatttgtagataaacaggagcatgctgatggtcttttgaaagacttaatgaga
gcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagcatc
attaacgactttaagaatgggacatgtaaacttctggtggccacttctgttgctgcacga
ggacttgatgtgaaacatctaatcctcgtagtgaattatagctgccctaaccattatgag
gattatgtccacagagcaggcagaactggaagagcaggcaacaaaggatatgcctacaca
tttatcacagaagaccaagcaaggtatgcaggtgatataattaaagctctggagttgtca
gggactgcagtccctcctgatctggaaaaactttggagtgatttcaaagatcaacagaaa
gctgaggggaagataattaaaaaaagtagtggcttttctggtaaaggattcaaatttgat
gaaacagaacaagctttggccaatgagaggaagaagttacaaaaagcagcacttggtcta
caggattcagatgatgaagatactgcagttgatattgatgaacaaattgaaagcatgttc
aattcaaagaagagagttaaagacatggcagcccctggaacttctagcgttcctgctcca
actgctggaaatgcagaaaaactggaaattgcaaagaggttggctctgagaatcaatgcc
cagaagaatttgggagccgaggctcaggatgtaatgcaacaggctactaatgcaatccta
agagggggcactattctggcccctactgtatctgcaaaaaccattgcagaacaacttgct
gaaaagatcaatgccaagctcaattatgtgcctatagagaaacaagaggaagaaaggcag
gatggtggacaaaatgaatcttttaagagatatgaggaagaattagagatcaatgatttc
ccacagactgcaaggtggaaagttacttctaaggaagccttgcagaggatcagtgaatat
tctgaagctgctattacaatcagaggaacatatttccctcctggcaaagaacccaaggaa
ggagagcgcaaaatttacctggcaattgaaagtgccaatgaactggctgtgcagaaggca
aaggcagaaattactaggcttataaaagaggaactaatcagactgcaaaattcatatcag
ccaacaaataaaggaagatataaagttttataa
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