Phascolarctos cinereus (koala): 110212009
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Entry
110212009 CDS
T05867
Symbol
DDX52
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcw03009
]
110212009 (DDX52)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110212009 (DDX52)
Ribosome biogenesis [BR:
pcw03009
]
Eukaryotic type
90S particles
Helicases
110212009 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_C_2
SR-25
CAF1A_acidic
LptC
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110212009
NCBI-ProteinID:
XP_020847413
UniProt:
A0A6P5KNZ3
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MDAHDLFRRLGVGAKFDLRRFPADAARFQLGKRKFDFDSSEVLEELNFFGSKKSTPAENG
TSLDNTLSKGEERLQEKGGGEEDNVIERKRKRNMKKKKQASETISVNSSKEEETILWMSS
LEAKTKDKKGKEENKLTAEKLEQLRKQKINRFRNKHKIHIQGTDLPEPIASFQQLDQEYK
IHSRILQNILDAGFQSPTPIQMQAIPIMLHGRELLASAPTGSGKTLAFSIPILMQLKQPT
NXGFRALIISPTRELASQTHRELVRISEGTGFRIHMIYKAAVAAKKFGPKSSKKFDILVT
TPNRLIYLLKQDPPGIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKVRRAM
FSATFAHDVEQWCKLNLDSVISISVGARNSAAETVEQELLFVGSETGKLLAMRDLIKKGF
QPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTAL
LARGIDFKGVNLVINYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVI
QQAGCPVPEYIRSFHKLPSKQKKKMIKKPLERESINTTPKYFLENSGNEQKIIHQNAGKK
TAPTKTKNSNQMPSKTIPEI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctgttccgtcgccttggcgtcggagccaagttcgacctgaggcgc
ttcccggcggacgcggcccgattccagctaggaaaaaggaaatttgactttgattcctca
gaagtattagaggagctgaacttctttggaagcaagaaatctaccccagctgaaaatgga
acctcattggataatactctgtccaagggagaggagagactacaggaaaaaggtggtggt
gaggaggataacgtaattgaaaggaagcggaaacgaaacatgaagaagaaaaaacaagca
tccgaaactatttcagtcaattccagtaaggaagaagaaactatactatggatgtcctca
cttgaagccaagactaaagataaaaaaggaaaagaagaaaataaactaactgcagagaaa
ttggaacagctccgaaagcagaagataaaccgtttccgaaataaacacaaaattcacatc
caaggaaccgatcttccagaacccattgcttcatttcagcaacttgaccaggaatataag
atccactctcgaatactacagaacatcttagatgcaggtttccagagccccacgccaatc
caaatgcaagcaattcccatcatgcttcatggtcgtgaactgctggcttcggctcctact
ggatctggaaagaccctggcttttagcattcctattttaatgcagctgaaacagcctaca
aatnaaggtttcagagcactgatcatctcacccactcgagaacttgccagtcagactcat
cgagagttagtaagaatctctgagggcacaggattcagaatacatatgatatacaaggca
gctgtggcagccaagaagtttgggcctaaatcatctaagaaatttgatattcttgtgact
actccaaatcgactaatttatttattgaaacaagatcctccaggaatagatcttaaaaat
gtggaatggttggtggtagatgaatctgacaaattgtttgaagacggaaagactggtttc
agagaccagctggctttcattttcctggcatgcacatctcacaaagtcaggagagctatg
ttcagcgcaacttttgcacatgacgtggaacagtggtgtaaattaaacctggacagtgtt
atttctatttctgttggagcaaggaattctgcagcagagactgtggaacaagaactcctg
tttgttggatctgagacaggcaaacttctggccatgagagaccttattaagaagggtttc
cagccacctgtccttgtttttgttcagtccattgaaagagctaaagaacttttccatgaa
ctcatttatgaaggtattaatgtggatgtaattcatgcagagagaactcagcagcagaga
gataacacagtccatagtttcagagcaggaaaaatctgggtcctcatctgcacagccttg
ctagcaagaggaattgattttaaaggtgtgaacttagtaatcaactatgactttccaacc
agtgcagttgaatatatccacaggataggtcgaactggaagagcaggacataaaggaaag
gctgttacattcttcactgaagacgataagccattattacggagtgttgccaatgtgata
cagcaggcaggatgtcctgtgccagagtacatcagaagtttccacaagcttccaagcaaa
caaaagaagaagatgattaagaaaccattggaaagagagagcattaatacaacccctaag
tatttcctagaaaactctggaaatgaacaaaaaattattcatcagaatgccggaaagaag
acagcacctactaaaaccaaaaatagtaatcagatgccttcaaagactattccagaaata
taa
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