Phascolarctos cinereus (koala): 110212010
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Entry
110212010 CDS
T05867
Symbol
SYNRG
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110212010 (SYNRG)
Membrane trafficking [BR:
pcw04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
110212010 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
110212010
NCBI-ProteinID:
XP_020847414
UniProt:
A0A6P5KRC1
LinkDB
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Position
Unknown
AA seq
1421 aa
AA seq
DB search
MALRPGTGAGGGAGAGGGAVGAGAGAGGGGSFIFPVASGIGPPQGLMPIQQQGFPMVSVM
QPNMQGMMGMNYSSQMSPGPIAMQGGITMGPMTAAGMPYMGQAPFLGMRPPGPQYNPDMQ
KQFAEEQQKRFEQQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNL
DGFSRDAKMHPTPASHPKKPDCPTPSHSTVTVSQSSAFLDEEEFSDFMQGPVEIPIFGSS
SSSQPFQSFHSTTPVGQLLSEKAVAQPLPPAQIPVSSALHGAPGQVPYFSTASTSHSTQK
TGPFLEEKFLISCDLSTSGQMQIKLNTSEAGHKTSGSAANKSHPSLTANNGGAIGGRVNG
AAIIAEAEKTSDQNLSVEDSGVGVFPSQDPIQPMIPSWIYNESLVPDAYKKILETTMTPT
GIDTAKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLAMIALTQRGVPAISP
DTLNQFPTAPVPNLSGFSMTLTTPVTQQTMMPSGPTVSMPLTIGQPVMGINLVAPVGGTP
AQGSSSFVPTYPANQVVKPEEDDFQDFQDASKSGSLDDSFTDFREMAASSKTANSQHGSS
APSLIPLPGTKAPPSTDKYSVFKGIVVDKTSENAAPFGEHGDKYSAFRELEQPAENKSLG
DSLAEFRSTGTDDGFTDFKTADSISPLEPSIKDKMFPIPFPSLTVQQKQQTQAKNHLHLA
DLDMFSSVGAPGEKPLSFPDTFSSSKSLSMRSLPATAAATTTTSAPTKSSSLADDFGEFS
LFGGYSSSASVGGQDDFADFMAFNNSSGLCEQKADDKYDILKEEASTVPLTGSIGNTVRN
GQNSSTAAPTKYDVFKQLSLEGSGIGVEELKDSTPPGKSDDDFADFHSNKFSSLCGNSDK
SLVEKVVAFRHAKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQFDMKLADVGGDLKHVM
SDSSLDLPTVSGQHPPAADIDDLKYATLGTYGSNSSVSVLASCDWSDRDDASPGRMLSPF
VLSAGSGSSSATSVLQKKETSFGSSENITMTTVSKVTTFPSDDTVPEATFSVFENFKNSI
SQPIEQRDIENGDFIKTQDLPATEQSQETMYSVSVATGMSQETPKECPDDFGEFQSEKPK
ISKFDFLVANTQSKMKSSEEMIKNELATFDLSVQGSHKRSLSLGDKEISRSSPSPALEQP
FRDRSNTLSEKPALPVIRDKYKDLTGEVEENERYAYEWQRCLGSALHIIKKANDTLNGIS
SSSVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATAVCSENLQQLLKDIDKTWNNLI
GFMSLATLTPDENSLDFSSCMLRPGIKNAQELACGVCLLNVDSRSRNEEKPAEEHPKKAF
NSETDSFKLAYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcggccgggaacgggagccggcggcggcgctggtgctggcggaggggcagtc
ggggccggcgccggggctggcgggggaggcagcttcatatttcctgttgcaagtggaata
ggaccccctcaaggtctgatgccaattcagcaacaaggatttccaatggtttctgttatg
cagcctaatatgcagggcatgatgggaatgaattacagttctcaaatgtctccaggacct
attgccatgcagggagggataacaatgggcccaatgacagcagcaggaatgccttacatg
ggacaagctccttttttagggatgcgtcccccaggtccacagtataaccctgacatgcaa
aagcaatttgcagaagagcaacaaaaacgatttgaacagcagcaaaaactcttagaagaa
gaaagaaaacgacgccaatttgaagaacagaaacaaaaactcagacttctaagtagcgtc
aaacccaagacaggagagaagagcagagatgatgctttggaagccataaaagggaactta
gatggattttccagagatgctaagatgcaccccactccagcatcgcaccccaagaaacca
gattgtcccacaccatcccattctactgtaactgtctcccaatcctctgcctttcttgat
gaagaagaattcagtgactttatgcaagggcctgttgaaattcccatatttggctcttca
tcctcttcccagccttttcagtctttccattccaccaccccagttggccagttactttca
gagaaggctgtggcccagcctctccctccagcacagattccagtgtcttctgccttacat
ggtgcccctgggcaggttccttatttttctactgcttcaacctcacacagtacacagaaa
acaggccctttcctggaggagaagttcctaatatcttgtgatttaagtacgtctgggcag
atgcaaattaaattaaatacttctgaagctgggcacaaaacctcaggctcagctgccaat
aagagtcatcccagtttaacagccaataacgggggtgctataggtggacgtgtaaatggt
gctgccatcattgcagaggcagaaaagacttcagaccaaaacctgtcagttgaagacagt
ggtgtgggtgtattcccttcacaagatccaatccagcctatgataccttcttggatttac
aatgagagcttagtcccagatgcatataagaagattttggaaacaactatgactccaact
ggaatagatactgctaaactttatcccatcctgatgtcatctgggcttcccagggaaacc
cttgggcaaatctgggccttagccaatcgtactacccctggaaaacttactaaagaagaa
ctttatactgttctagctatgatagctctaactcagaggggggtgcctgcaatcagtcct
gacacattgaaccagttcccaactgctcctgtcccaaatctgagtggcttttccatgact
cttactaccccagtgactcaacagacgatgatgccttctggtcctacagtctctatgcct
cttaccattggacaaccagtcatgggtattaacctagttgcaccagtgggtggaactcca
gcccagggttccagtagttttgtgccaacttacccagcaaatcaggtagtaaaaccagaa
gaagatgacttccaagattttcaagatgcgtcaaagtcaggatcccttgatgactcattt
actgatttccgagagatggctgcttcttcaaaaacagctaattcccaacatgggagcagt
gccccttctttgataccacttccaggaacaaaagcaccaccttcaacagataaatattct
gtatttaaaggaattgttgttgataagacatctgaaaatgcagctccatttggagaacat
ggagacaaatacagtgctttcagagaattagaacagccagcagaaaataagtccctagga
gatagccttgcagaattcagatctacaggaacagacgatggtttcacagattttaaaaca
gccgacagcatatcaccactagaaccgtcaataaaagacaaaatgtttccaatacccttc
ccctctttaactgttcaacagaaacaacaaacacaagctaaaaatcatctgcacttggcc
gacttagatatgttttcctctgttggtgcccctggtgagaaaccactttcttttccagat
acatttagctcatcaaaatcattgtccatgcggtcactcccagcaactgctgctgcaacc
actacaacatcagcaccaactaaaagttctagcttagctgatgactttggagaattcagc
ctttttgggggatattctagttcagcatctgttgggggacaggatgactttgcagatttt
atggctttcaataatagttccggcttgtgtgagcaaaaagcagatgataaatacgatatt
cttaaagaagaagctagcactgttcctctgactggcagcataggcaacacagtgagaaat
gggcaaaactcttcaactgctgctccaaccaaatatgatgtcttcaaacagctttctctg
gagggctctggaataggtgttgaggagttgaaagatagtacccctccagggaaaagtgat
gacgactttgctgacttccattcaaacaaattttcatctctgtgtggtaattcagacaaa
tctctggtggaaaaagtggtagctttcaggcatgccaaagaagactctgcttcagtgaag
tctttggacctgccttccattggtggtagcagtgttggcaaggaggactctgaagatgct
ctgtctgtccagtttgacatgaaactggctgatgtaggaggagatcttaagcatgtcatg
tctgatagctctttggatttgcccacagttagtggccagcatccgcctgcagcagatatc
gatgacttaaagtatgctactttggggacttatggtagcaattcttcagtgagtgttctt
gcaagctgtgactggtctgacagggatgatgcttctccaggtagaatgctttctccgttt
gtcctctcagcaggaagtggttcctcctcagctacttcagttcttcagaagaaagagact
tcatttggaagttcagaaaacattaccatgacaacagtttccaaagtgacgacctttcca
agtgatgatactgttcccgaagctacgttttcagtttttgaaaactttaaaaatagtatt
tcccagcccattgaacaaagagacatcgagaatggggatttcataaaaacacaggaccta
cctgcaactgaacagagccaagaaaccatgtattcagtgtcagttgccactggcatgtct
caggaaactccaaaagaatgccctgatgactttggagagtttcaaagtgaaaagcccaaa
attagtaaatttgacttcctggtggctaatacacaaagcaagatgaaatctagtgaagaa
atgatcaaaaatgagctggctacttttgacctctctgttcaagggtctcacaagagaagt
ttgagccttggtgataaagaaataagccgttcctctccatctccggctttagagcagcct
ttcagagatcgttccaacactctcagtgaaaaacctgccctgcctgttatccgggataaa
tacaaagacctaactggggaggtggaagagaatgaaagatatgcttatgaatggcagaga
tgtttgggaagtgctctacatatcattaagaaggcaaatgacactctaaatggaatcagt
agctcatctgtttgcacagaagtaattcagtcagcacagggcatggaatatttattaggt
gttgtcgaggtgtacagggtaaccaaacgtgtggagctagggatcaaggccactgcagtg
tgcagtgaaaatcttcagcagctgctgaaggacattgataagacgtggaacaacctgata
ggatttatgtcacttgccacactcacgccagatgaaaactcgttggatttctcatcctgt
atgctgcgtcctgggattaaaaatgctcaggaacttgcctgtggggtatgcctactgaat
gtcgattcaaggagccgaaatgaagagaaacctgcagaagagcatcctaaaaaagcattc
aattctgaaacagacagtttcaaactggcatatggaggacatcagtatcatgcaagctgt
gccaacttctggatcaactgtgtagagcccaaacctcctggactcatcctaccagatcta
ctctaa
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