Phascolarctos cinereus (koala): 110212039
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Entry
110212039 CDS
T05867
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03440
Homologous recombination
pcw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110212039 (BRIP1)
03460 Fanconi anemia pathway
110212039 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110212039 (BRIP1)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110212039 (BRIP1)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110212039 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
110212039 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
DUF2226
Motif
Other DBs
NCBI-GeneID:
110212039
NCBI-ProteinID:
XP_020847477
UniProt:
A0A6P5KRJ4
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MSSTLSEYVIGGVKIYFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPGEENLNKKTEVPLPCCCICHLHDPTNDISINVNQGASCSFTSPIVTSSM
KNEISTCQEDSTPEITLAAKLSAKKQASLLSDGKDDFQVDKKRIRPLETKQQVRKRHCFA
KDIQNLDMKIAPERIVKPNSPLGKKIMSSPQKLPGPCTRCSCSIKSGKSQDDDNITKKEH
GGKCKTPKIFFGTRTHKQIAQITRELRRTAYSGVRMTILSSRDHTCVHPEVIGNFNRNEK
CMELMDGKNGRSCYFNHGVHKISEQHALQTFPGMGRAWDIEDLVSLGRKLKACPYYAARE
LMLDADIVFCPYNYLLDSQIRESMDINLKEQIIILDEAHNIEDCARESASYSVTEIQLRF
ARDELDVMVSNNIRKKNHEPLRAVCYSLINWLQENSKHLVERHYESSCKVWSGSEMISHF
YKMGITAATFPILQGHFTAVLQKEEKIMTINGKEQIREIPVVSPSTQIMLKGLFMVLDYL
FRQKSRFADDYKVALQQTYSWTSQIDIPDKNGFIALPKNKKHSRQKMAVNVLNFWCLNPA
VAFSDISSNVRTIVLSSGTLSPMKSFSSELGVTFTIQLEANHVIQNSQVWVGTIGSGPKG
RNLCATFQHAETFAFQDEVGALLLSVCQTVSQGILCFLPSYKLLDKLKERWIHTGLWHNL
ELVKTVITEPQWGQKAAFDEVLQLYYNSIKCKGDRDGALLVAVCRGKVSEGLDFSDENAR
AVITIGIPFPNVNNLQVELKRKYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKN
DWGALILVDDRFRRNPDQYISGLSKWIRQQIKHHETFESALESLAAFSKKHQKVIDVSSP
NSSESEQEVACLKDESSTSLLESTIHPSPNVLGEDERKPFVQELQTSTMMAVELKLHSHP
SNIITAQNKNDSLLLEYSPQKIKREKCLISRSTSPTFSKQIERNSCPESDSVKRYFTPKL
LTSIPVCTFSENHDISPVPSKEEKRESTVGLSLANRGQSSSLSGNIPFGPGPQSESITSL
TNTVSKKDPAEQLLYPEEVLDPDFDLSPVHGEAEFSNVNVDIETTEEDESVYFTPELYDD
TESDVEENEELLETGGINQRTENSDYIIAENLLEIGCTKGMGSDHTDMKLNRIMQNEEHK
VDDISNNVKAANIHEQELERTQEMDTIGNIST
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacactatctgaatacgttattggtggagtgaagatttacttcccttgtaaa
gcttacccatcacagcttgctatgatgaattctattgttagaggattaaacagtaagcag
cactgtttgttggagagccccacaggaagtgggaaaagcttagccttactttgttctgcc
ttggcatggcagcagtctctcagtgaaaagccaggagaggagaacttgaataaaaagact
gaagtacccttgccatgttgttgtatatgccatttgcacgatcccactaatgatatcagt
attaatgtgaaccaaggagcttcatgttctttcaccagtccaatcgtgacatcttccatg
aaaaatgaaatctcaacttgccaagaagactctactccagaaatcacacttgctgcgaaa
ttatctgccaagaaacaggcatctttgcttagcgatggaaaggatgattttcaagtagac
aagaaaaggattcgtcccttagaaaccaagcagcaggttagaaagcgtcattgctttgcg
aaggatatacagaatttagatatgaaaattgcaccagaaaggattgtgaagccaaactct
ccactgggaaaaaagataatgtcttctccacaaaagcttcctggtccttgtactcggtgt
tcctgttccattaaaagtggaaaaagtcaagatgacgataatataacaaagaaagaacat
gggggaaaatgcaagacacctaaaatattttttgggactcgtacacataaacagatagct
cagattactagagaactgcggaggacagcatactctggggtccgaatgactattctttct
agcagggatcatacttgtgtccatcctgaagtaatcggtaatttcaacaggaatgaaaaa
tgtatggagttgatggatggaaaaaatggtagatcctgttatttcaaccacggtgtccat
aagattagtgagcaacatgctctacagactttcccagggatgggcagggcctgggatata
gaagatcttgtgagcctggggagaaagttaaaggcatgtccatattatgcagctcgagag
ctaatgttagatgctgacattgtgttctgtccctacaactatctcctggattcacagata
agggaaagtatggatatcaatttgaaagagcagatcatcattttagatgaagcccataat
attgaggactgtgcacgtgagtcagccagttacagtgttacagaaatccaacttaggttt
gctcgagatgaactagatgtcatggtcagcaacaatataaggaagaaaaaccatgaaccc
ttgcgagctgtttgctatagcctcataaattggttacaggaaaactctaaacatcttgta
gaaagacattatgaatcatcctgtaaagtgtggagtggaagtgaaatgatctctcacttc
tataaaatgggcataactgctgctacctttccaatattacagggacattttactgctgtc
cttcaaaaagaagaaaaaattatgaccattaatggtaaagagcaaatcagagaaatacct
gttgttagtccctcgactcagattatgctcaaaggactgtttatggtactggattatctt
tttaggcagaagagcaggtttgcagatgattacaaagtcgctttacagcaaacttactct
tggacaagccagattgatattccagacaaaaatggtttcattgctttacctaaaaataag
aaacattctagacaaaaaatggcagtaaatgtactaaacttttggtgcttgaatccagct
gtggccttttcggatattagtagtaatgtacggacgattgttctgtcatctggtactctt
tcaccaatgaaatctttttcatctgaacttggtgtgacatttactatccaactagaggct
aatcatgtcattcagaactcacaggtttgggttggcactattgggtcaggccccaagggc
cgtaatctctgtgccaccttccagcacgcagagacctttgcattccaggatgaagttgga
gcacttctcttgtccgtatgccaaacagtgagccaagggattttgtgcttcttgccatct
tacaagttattggataaattaaaagaacgttggatacacactggtttatggcataatctt
gagctagtgaagacagtcatcacggaaccacaatggggacagaaagctgcatttgatgaa
gtgttacaattgtactacaattcgatcaagtgtaaaggagaccgagatggtgccctcctt
gtggcagtttgccgaggtaaagtgagtgaaggtttggatttctcagatgaaaatgcccgt
gctgtcataacaataggaattccatttccaaatgtgaataatcttcaggttgaattaaag
agaaagtacaacgaccagcattcaaaactaagaggtcttttacctggacgccagtggtat
gaaattcaagcttatagggcgctgaaccaggcactcggcaggtgtattcggcataaaaat
gattggggagctcttattttagttgatgatcgcttcaggagaaacccagatcaatatata
tctggactttccaaatggattcggcaacagattaagcaccatgaaacttttgagagtgca
ttggagtccttggctgcattttctaaaaagcatcaaaaagtcattgatgtgtcatcccca
aacagtagcgagtctgaacaagaagtggcctgtttaaaggatgagtcctcgacatcttta
ttagaatcaacaattcacccatcaccaaatgttcttggagaagatgaacggaaacctttt
gtccaggagcttcagacttctacaatgatggctgtggagctcaaactacacagtcaccca
agtaacatcatcacagcccagaataaaaatgattcattattgttggaatattctccacag
aaaataaagagggaaaaatgtttaatatcaagatccacaagtccaaccttcagtaaacaa
atagaaaggaatagctgtcctgaatctgactctgtgaagagatattttacccctaagttg
ctgacttccatacctgtgtgcacattttcagagaaccatgacatcagtcctgtcccttcc
aaagaggaaaagagggaaagtacagtcggtctgtctcttgctaatagaggccagtcctcg
tccctgtcaggaaacataccatttggcccaggtccacagtcagaaagcattacttcattg
accaatactgttagtaaaaaagatcctgctgaacagctactctaccctgaagaagtcctg
gatccagacttcgatcttagtcctgtacatggagaagctgaattttccaatgttaatgta
gatattgaaacaacagaagaagacgaatctgtctatttcacaccggaactttatgatgat
acagaatcagacgtagaagaaaatgaagagctacttgaaactggtggaataaatcagagg
actgaaaattcagattacattatagcagaaaaccttttggaaattggttgtaccaaagga
atgggttcagatcacacagacatgaagttgaatagaatcatgcaaaatgaagaacataaa
gttgacgacattagtaataatgtaaaggcagcaaatatacatgaacaggagctggaaaga
actcaggaaatggacaccataggtaacatcagcacatga
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