Entry |
|
Symbol |
SH3TC1
|
Name |
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1
|
KO |
K24313 | SH3 domain and tetratricopeptide repeat-containing protein |
|
Organism |
pcw Phascolarctos cinereus (koala)
|
Brite |
KEGG Orthology (KO) [BR:pcw00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:pcw04131]
110212209 (SH3TC1)
Membrane trafficking [BR:pcw04131]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110212209 (SH3TC1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1378 aa
MEGPVVPADATVKCFIPDVKPQPNQEEEEEEGWQQRLTPLMGRKPMGSLERRDQDWRRNI
LGGVQGSTRPMEAPKLLGEKENEGTFGSVRKDTQLSDGCRATVGTSLGQMGTFPTDISLK
LIMVQPKSGLPDPGLQEELRRRLRLLENDSREVSAVFSELSARLLSIHSDQDLIVVTFKT
FEEIWKFSTYYCLGFINHCMENLLMDQDFWLLSSYKSRGDSADFDAEIDIFIDEEALQLM
HKSLLIQEGSFFVLCPDNQIREIMAPRGERKAGQPCRIASPSCLRAPTQIAQTLSDSLPM
SAEGAFEELLIPFHQWSLKVQSDPVDVFVGESKICNQIVTDTCFAIVDHCSQVPEEMSFE
DGDQIKILGILVPCLGWFLGRHSVTGQVGFVKTSHIQTHAQAPRLANVILDEEERSFFIN
KRNFSEDDVIRLLKKTATSTVCTAYSMDTLEEMEFQKSREQEVHQPPLGCDPSPVADKVK
VILERYKTLQPCPHEPESQRRDDDQPSAPESLPMPKEPHFDLEMEENDNSPERFLLLLLF
LNEDEYKPCYRSLYDVSLPCLNTMFDGYTEEEELVCYFGQARVAAKKANLPMALTRLCFL
LGRLCVKKLKLSQARVYFEEALGALRGSFSDLFLVVAIYTHLTAIYLKQKNRQKCTHVFG
KVAALLLGVPSYICSTEAEADLLKFALKMVILSQQGQQAEARICFLLAKHYINFKQSEEA
LPFLERLLLLNGELGLWDSSWSTDCYLHLGDIYSKKCLPHLTLSCIKIASFQSSRTFMSS
LESVDLVVQNTPKLYGLRKVEHVLPSQIAHYLKQALAFAVTSQEQKLCGSIYRSLSELYS
YHRKYEEAIEYGWKAVEVDSASIGQVINNLVSFAWLHILDRQNPVALGILQSIIESSGSS
PQQLGIIYNMAAIALKRMNSTKRAAKSYYKALHVSKELGSVQNQAVVLANFGALCLHSNA
SGLAEHYFIEAVKLFSQLPSTXCGREFVQVLLWLGQHYTRGAQQEKGKCYYEWAFLVAME
MSHFESQLQATQLLCHFYSTIVPNEAQCVIYNEYQLSLARRMSDKVLEGQLLETISQLYL
SLGTERAYKSALEYTKRSLGIFIDLQKKEKEAYAWLQAGKIYYILRQTELVDLYIQVAQD
AALYTGDPSLGLEMFEAAGDIFFNGSWEREKAVSFYRDRALPLAIRTGNKETELRLCNKL
VELLYFLKSYQECLEFAHTSLALSINLGSRLNERVAYHRLAAVHHRLRQCELAEHFYLKA
LSLCSSPLEFDEETLYYVKVYLILGDLIFYDLKDPFDAAGYYHLALAAAMDLGNKRAQLK
IYTRLATIYHNFLVDREKSLFFYQKARTFATELNVRRINLAPERYYRGAAWIVSKSHA |
NT seq |
4137 nt +upstreamnt +downstreamnt
atggaggggccggtggtccctgcggatgcaacagtaaaatgcttcatcccagacgttaag
ccccaacctaaccaagaggaggaagaggaagagggatggcagcagcgcttgactcccctg
atgggaagaaagccaatggggtccttggaaaggagagaccaggattggaggaggaatatt
cttggtggtgttcagggatcaaccagacccatggaggctcccaagcttctaggagaaaag
gagaatgaaggaacctttgggtcagtaaggaaggatactcagctctctgatggctgcagg
gccaccgtggggacatctcttggccagatgggaacttttccaacagatatttctttgaag
ctcatcatggtacaaccaaagagtggccttcctgaccccggtctacaagaggaattgagg
cgaagactccgtctcttggaaaatgacagcagggaggtttcagctgtgttcagtgagcta
tcagccaggctgctgtccattcacagtgaccaggaccttattgtagtgacatttaaaact
tttgaagaaatatggaagttttctacttattactgtctaggtttcataaaccactgcatg
gaaaacttgttgatggaccaagacttctggcttctctccagctacaagagcaggggggac
agtgcagacttcgatgctgagattgacatctttattgatgaagaggctttacagttaatg
cacaaaagcctcttaatccaggaagggtcattctttgtattgtgtcctgacaaccaaata
agagagatcatggctccaagaggtgaaaggaaggctggccagccctgccggattgcatcg
ccaagctgtctgagggcaccgacacagattgctcagacactgtctgatagcctccccatg
tcagctgaaggggcctttgaggaactcttgattccatttcatcagtggtctcttaaggtg
cagtctgatcctgtagatgtctttgttggtgaatccaagatctgcaatcaaattgttaca
gacacctgctttgccatagtggatcactgtagccaagtaccagaggagatgagtttcgag
gatggggatcagatcaagatcctaggcatccttgttccctgcctggggtggtttctgggg
aggcattctgtgaccggccaggtcggctttgtgaagaccagtcatattcaaacacacgcc
caagctcccaggttagcaaatgtgatcttggatgaggaggaaaggtcatttttcatcaac
aaaaggaatttttcagaagatgatgtgatccggttattaaagaaaacagccacttctact
gtttgtacagcatatagtatggacacattagaagaaatggaatttcagaaatcccgagaa
caagaagtgcatcagcctccactcggttgtgacccaagtccagtggctgacaaggtgaaa
gtcatcttagagaggtacaagaccctccagccctgccctcatgagccagagagccagaga
agggatgatgatcagccatcagctccggagagcctgcccatgcccaaggaaccccacttt
gacctcgagatggaagaaaatgacaacagcccagaaagatttctcctcttgctactgttc
ctaaatgaggatgaatacaagccatgctacaggagcctgtatgatgtctctcttccatgt
ctgaataccatgtttgatggatatactgaggaagaagagcttgtctgttactttgggcag
gcgagggtagctgccaagaaggccaaccttcccatggccctgacaagactgtgctttctc
cttgggaggctatgtgtcaaaaaactcaagctctcccaggctcgggtttattttgaagaa
gccttgggagccctgagaggcagcttcagtgaccttttcctcgtggtggctatttacacc
catctcactgccatttatttgaaacagaaaaacagacagaaatgcacacatgtgtttggc
aaggtagcagctctgctcctgggagttcccagctatatctgcagcacggaggcagaggct
gatctcctcaagtttgctttgaagatggtcatcttgagccagcaaggccagcaggctgaa
gccagaatctgtttcctgctggccaagcattatattaacttcaagcaatcagaagaagcc
ttgcccttcctggagaggttgctgcttttgaatggtgaattgggtttatgggacagctca
tggtccacagattgttacctccatcttggggatatctatagcaaaaaatgtctgccccac
cttacgctgagctgtatcaaaattgcctctttccaaagctcacgaaccttcatgagctcc
ttggagagtgtcgacttggtcgtccagaatacccctaagctttacggcctcaggaaggtg
gaacatgtgcttccatcccaaatcgcacactacctcaagcaagcgctggcctttgctgtg
acttctcaggagcaaaagctctgtggttccatttatcgtagtctttcagaactctatagc
taccacaggaaatatgaagaggccatcgagtatggatggaaagctgtggaagttgactca
gccagcattggccaggtcattaacaacttagtttcttttgcttggttacatattcttgac
aggcaaaatccagtagcactggggatcttacagtccattatagaatcctctggaagtagc
cctcagcaattagggattatttacaacatggccgccattgccctgaaaaggatgaacagt
acaaagagggcagccaagagttactacaaagcactccatgtttccaaagagcttggctcg
gtgcagaaccaggcagttgtcctggcaaacttcggggctctctgtctccactcgaatgcc
agtggtctggctgaacactatttcattgaagcagtaaaactcttctcccaacttcccagt
actnngtgtggccgagaatttgtccaagttctcctctggctggggcagcattataccaga
ggagctcaacaggagaaagggaagtgttattatgagtgggcattcctggtggccatggaa
atgagtcattttgaaagccagctccaagcaacccaactgctgtgtcatttctacagcact
attgtgccaaatgaggcccagtgtgtcatctacaatgaatatcaactctccttggccagg
aggatgtcagacaaagttctagaagggcagctactggaaaccatcagtcagctgtatctt
tccttaggtacagaaagagcttacaagtcagcccttgaatatactaagagaagtcttgga
atatttatagaccttcagaagaaagaaaaagaggcatatgcttggctccaggcaggaaag
atctattacattctgagacagactgaattagtagatctatacattcaggtggctcaagat
gctgccctctacactggagatcccagcctggggttggaaatgtttgaagctgctggagac
atattcttcaatggttcttgggagagagaaaaggcagtgtccttctacagggaccgggct
cttcctcttgctattaggactggtaacaaggagactgaactccgactgtgcaacaagttg
gtggaactgctgtactttctcaagtcctaccaggaatgtctagaatttgcacacacatcc
cttgccctcagcataaacttaggaagccggttaaacgagcgtgtggcctaccatcggctg
gctgcagtccaccaccgcctaaggcagtgtgagttggctgaacacttttacctcaaggca
ctatctctgtgctcatcacccctggaatttgatgaagagactttgtattacgtgaaggtg
tatctgatcctgggggacctcatattctatgacctaaaggacccatttgatgctgctggc
tattaccaccttgcactcgcagctgctatggatttaggtaacaagagggctcagctgaaa
atttataccaggttggctacaatctaccataactttctggtggaccgggagaaatctctc
tttttctaccagaaagcaaggacctttgccacagagctgaatgttcggagaatcaacctg
gcccctgaacgctattataggggtgcagcctggattgtgtccaaaagccatgcataa |