Phascolarctos cinereus (koala): 110212209
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Entry
110212209 CDS
T05867
Symbol
SH3TC1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110212209 (SH3TC1)
Membrane trafficking [BR:
pcw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110212209 (SH3TC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
SH3_1
YPL108W_C
SH3_2
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
110212209
NCBI-ProteinID:
XP_020847803
UniProt:
A0A6P5KQ47
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MEGPVVPADATVKCFIPDVKPQPNQEEEEEEGWQQRLTPLMGRKPMGSLERRDQDWRRNI
LGGVQGSTRPMEAPKLLGEKENEGTFGSVRKDTQLSDGCRATVGTSLGQMGTFPTDISLK
LIMVQPKSGLPDPGLQEELRRRLRLLENDSREVSAVFSELSARLLSIHSDQDLIVVTFKT
FEEIWKFSTYYCLGFINHCMENLLMDQDFWLLSSYKSRGDSADFDAEIDIFIDEEALQLM
HKSLLIQEGSFFVLCPDNQIREIMAPRGERKAGQPCRIASPSCLRAPTQIAQTLSDSLPM
SAEGAFEELLIPFHQWSLKVQSDPVDVFVGESKICNQIVTDTCFAIVDHCSQVPEEMSFE
DGDQIKILGILVPCLGWFLGRHSVTGQVGFVKTSHIQTHAQAPRLANVILDEEERSFFIN
KRNFSEDDVIRLLKKTATSTVCTAYSMDTLEEMEFQKSREQEVHQPPLGCDPSPVADKVK
VILERYKTLQPCPHEPESQRRDDDQPSAPESLPMPKEPHFDLEMEENDNSPERFLLLLLF
LNEDEYKPCYRSLYDVSLPCLNTMFDGYTEEEELVCYFGQARVAAKKANLPMALTRLCFL
LGRLCVKKLKLSQARVYFEEALGALRGSFSDLFLVVAIYTHLTAIYLKQKNRQKCTHVFG
KVAALLLGVPSYICSTEAEADLLKFALKMVILSQQGQQAEARICFLLAKHYINFKQSEEA
LPFLERLLLLNGELGLWDSSWSTDCYLHLGDIYSKKCLPHLTLSCIKIASFQSSRTFMSS
LESVDLVVQNTPKLYGLRKVEHVLPSQIAHYLKQALAFAVTSQEQKLCGSIYRSLSELYS
YHRKYEEAIEYGWKAVEVDSASIGQVINNLVSFAWLHILDRQNPVALGILQSIIESSGSS
PQQLGIIYNMAAIALKRMNSTKRAAKSYYKALHVSKELGSVQNQAVVLANFGALCLHSNA
SGLAEHYFIEAVKLFSQLPSTXCGREFVQVLLWLGQHYTRGAQQEKGKCYYEWAFLVAME
MSHFESQLQATQLLCHFYSTIVPNEAQCVIYNEYQLSLARRMSDKVLEGQLLETISQLYL
SLGTERAYKSALEYTKRSLGIFIDLQKKEKEAYAWLQAGKIYYILRQTELVDLYIQVAQD
AALYTGDPSLGLEMFEAAGDIFFNGSWEREKAVSFYRDRALPLAIRTGNKETELRLCNKL
VELLYFLKSYQECLEFAHTSLALSINLGSRLNERVAYHRLAAVHHRLRQCELAEHFYLKA
LSLCSSPLEFDEETLYYVKVYLILGDLIFYDLKDPFDAAGYYHLALAAAMDLGNKRAQLK
IYTRLATIYHNFLVDREKSLFFYQKARTFATELNVRRINLAPERYYRGAAWIVSKSHA
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccggtggtccctgcggatgcaacagtaaaatgcttcatcccagacgttaag
ccccaacctaaccaagaggaggaagaggaagagggatggcagcagcgcttgactcccctg
atgggaagaaagccaatggggtccttggaaaggagagaccaggattggaggaggaatatt
cttggtggtgttcagggatcaaccagacccatggaggctcccaagcttctaggagaaaag
gagaatgaaggaacctttgggtcagtaaggaaggatactcagctctctgatggctgcagg
gccaccgtggggacatctcttggccagatgggaacttttccaacagatatttctttgaag
ctcatcatggtacaaccaaagagtggccttcctgaccccggtctacaagaggaattgagg
cgaagactccgtctcttggaaaatgacagcagggaggtttcagctgtgttcagtgagcta
tcagccaggctgctgtccattcacagtgaccaggaccttattgtagtgacatttaaaact
tttgaagaaatatggaagttttctacttattactgtctaggtttcataaaccactgcatg
gaaaacttgttgatggaccaagacttctggcttctctccagctacaagagcaggggggac
agtgcagacttcgatgctgagattgacatctttattgatgaagaggctttacagttaatg
cacaaaagcctcttaatccaggaagggtcattctttgtattgtgtcctgacaaccaaata
agagagatcatggctccaagaggtgaaaggaaggctggccagccctgccggattgcatcg
ccaagctgtctgagggcaccgacacagattgctcagacactgtctgatagcctccccatg
tcagctgaaggggcctttgaggaactcttgattccatttcatcagtggtctcttaaggtg
cagtctgatcctgtagatgtctttgttggtgaatccaagatctgcaatcaaattgttaca
gacacctgctttgccatagtggatcactgtagccaagtaccagaggagatgagtttcgag
gatggggatcagatcaagatcctaggcatccttgttccctgcctggggtggtttctgggg
aggcattctgtgaccggccaggtcggctttgtgaagaccagtcatattcaaacacacgcc
caagctcccaggttagcaaatgtgatcttggatgaggaggaaaggtcatttttcatcaac
aaaaggaatttttcagaagatgatgtgatccggttattaaagaaaacagccacttctact
gtttgtacagcatatagtatggacacattagaagaaatggaatttcagaaatcccgagaa
caagaagtgcatcagcctccactcggttgtgacccaagtccagtggctgacaaggtgaaa
gtcatcttagagaggtacaagaccctccagccctgccctcatgagccagagagccagaga
agggatgatgatcagccatcagctccggagagcctgcccatgcccaaggaaccccacttt
gacctcgagatggaagaaaatgacaacagcccagaaagatttctcctcttgctactgttc
ctaaatgaggatgaatacaagccatgctacaggagcctgtatgatgtctctcttccatgt
ctgaataccatgtttgatggatatactgaggaagaagagcttgtctgttactttgggcag
gcgagggtagctgccaagaaggccaaccttcccatggccctgacaagactgtgctttctc
cttgggaggctatgtgtcaaaaaactcaagctctcccaggctcgggtttattttgaagaa
gccttgggagccctgagaggcagcttcagtgaccttttcctcgtggtggctatttacacc
catctcactgccatttatttgaaacagaaaaacagacagaaatgcacacatgtgtttggc
aaggtagcagctctgctcctgggagttcccagctatatctgcagcacggaggcagaggct
gatctcctcaagtttgctttgaagatggtcatcttgagccagcaaggccagcaggctgaa
gccagaatctgtttcctgctggccaagcattatattaacttcaagcaatcagaagaagcc
ttgcccttcctggagaggttgctgcttttgaatggtgaattgggtttatgggacagctca
tggtccacagattgttacctccatcttggggatatctatagcaaaaaatgtctgccccac
cttacgctgagctgtatcaaaattgcctctttccaaagctcacgaaccttcatgagctcc
ttggagagtgtcgacttggtcgtccagaatacccctaagctttacggcctcaggaaggtg
gaacatgtgcttccatcccaaatcgcacactacctcaagcaagcgctggcctttgctgtg
acttctcaggagcaaaagctctgtggttccatttatcgtagtctttcagaactctatagc
taccacaggaaatatgaagaggccatcgagtatggatggaaagctgtggaagttgactca
gccagcattggccaggtcattaacaacttagtttcttttgcttggttacatattcttgac
aggcaaaatccagtagcactggggatcttacagtccattatagaatcctctggaagtagc
cctcagcaattagggattatttacaacatggccgccattgccctgaaaaggatgaacagt
acaaagagggcagccaagagttactacaaagcactccatgtttccaaagagcttggctcg
gtgcagaaccaggcagttgtcctggcaaacttcggggctctctgtctccactcgaatgcc
agtggtctggctgaacactatttcattgaagcagtaaaactcttctcccaacttcccagt
actnngtgtggccgagaatttgtccaagttctcctctggctggggcagcattataccaga
ggagctcaacaggagaaagggaagtgttattatgagtgggcattcctggtggccatggaa
atgagtcattttgaaagccagctccaagcaacccaactgctgtgtcatttctacagcact
attgtgccaaatgaggcccagtgtgtcatctacaatgaatatcaactctccttggccagg
aggatgtcagacaaagttctagaagggcagctactggaaaccatcagtcagctgtatctt
tccttaggtacagaaagagcttacaagtcagcccttgaatatactaagagaagtcttgga
atatttatagaccttcagaagaaagaaaaagaggcatatgcttggctccaggcaggaaag
atctattacattctgagacagactgaattagtagatctatacattcaggtggctcaagat
gctgccctctacactggagatcccagcctggggttggaaatgtttgaagctgctggagac
atattcttcaatggttcttgggagagagaaaaggcagtgtccttctacagggaccgggct
cttcctcttgctattaggactggtaacaaggagactgaactccgactgtgcaacaagttg
gtggaactgctgtactttctcaagtcctaccaggaatgtctagaatttgcacacacatcc
cttgccctcagcataaacttaggaagccggttaaacgagcgtgtggcctaccatcggctg
gctgcagtccaccaccgcctaaggcagtgtgagttggctgaacacttttacctcaaggca
ctatctctgtgctcatcacccctggaatttgatgaagagactttgtattacgtgaaggtg
tatctgatcctgggggacctcatattctatgacctaaaggacccatttgatgctgctggc
tattaccaccttgcactcgcagctgctatggatttaggtaacaagagggctcagctgaaa
atttataccaggttggctacaatctaccataactttctggtggaccgggagaaatctctc
tttttctaccagaaagcaaggacctttgccacagagctgaatgttcggagaatcaacctg
gcccctgaacgctattataggggtgcagcctggattgtgtccaaaagccatgcataa
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