Phascolarctos cinereus (koala): 110212608
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Entry
110212608 CDS
T05867
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110212608 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110212608 (CPSF3)
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110212608 (CPSF3)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110212608 (CPSF3)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110212608 (CPSF3)
U7-dependent histone pre-mRNA processing factors
110212608 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
110212608
NCBI-ProteinID:
XP_020848266
UniProt:
A0A6P5KXS6
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQIQAIPYTGPFSLLFYQLQKLTGDVEEI
DIQQKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIQKGAVPK
VSKKIEMHIYSKRLEIMLQDIFGEDCVSVKEGSILSVTVDGKTANISLETRTVECEEGSE
EDESLREMVELAAQRLFEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatcccggccgaggagagcgaccagctactgatccgaccgcttggggctgga
caagaagtaggaagatcatgtattattctggagttcaaaggaagaaaaataatgttggat
tgtggaattcatcctggcttagaaggaatggatgctcttccttacattgatttgatagat
cctgctgaaattgatctcctcttaattagtcatttccatttagatcactgtggagcctta
ccttggtttctgcagaagacaagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttacagatggcttctttcagattatgtcaaagttagtaacatatcagcggatgac
atgctatatactgagacagatttagaagagagtatggacaaaattgaaactatcaacttt
catgaagttaaggaagttgcaggaatcaaattttggtgttatcatgcgggccatgttctg
ggagcagccatgtttatgattgagatcgctggtgtaaagcttttatatacaggtgatttc
tcaagacaagaagataggcacttaatggcagctgaaattcctaatattaaaccagatatt
cttattattgaatctacgtatgggactcacattcatgaaaaacgagaagagcgagaggca
agattctgtaacactgttcatgacattgtgaatagaggtggcagaggtctcattcctgtc
tttgctctgggacgagctcaagaacttcttctgattttagatgagtattggcagaatcat
ccagaactccatgacattccaatatactatgcatcatctttggctaagaagtgtatggca
gtgtaccagacctatgtgaatgccatgaatgacaaaatccgcaaacaaatcaatatcaat
aatccttttgttttcaaacacattagtaatctcaagagcatggatcattttgatgacatt
ggcccaagtgttgtgatggcttcgccaggtatgatgcagagtggcttatccagagaatta
tttgaaagttggtgtactgataaaagaaatggtgtaattatagcaggatactgcgtcgag
ggaacacttgccaagcatatcatgtctgaacctgaagagatcactaccatgtctggacag
aagctgcccctgaagatgtctgtagattatatttctttctcggctcacacagattaccag
caaaccagcgaatttattcgagctttgaagcctccacatgtgatactggtgcatggagag
cagaatgaaatggcaagattgaaagcagcattgataagagaatacgaagataatgatgag
gttcacatagaagttcacaatcctcgaaatactgaagcagtaacattaaatttccgagga
gaaaaattagccaaggttatgggcttcttagcagacaagaaacctgaacaaggacaacgt
gtttcaggaatcctagttaaacgaaactttaattatcatattctttctccttgtgatctt
tccaattatacagatttagcaatgagcactgtaaaacagattcaagccattccctacact
ggtccttttagtttgctgttttatcagctacagaaactgacaggtgatgtagaagaaatt
gacattcagcaaaaaccagctttgaaagtgttcaaaaatattactgtaatacaggaacca
ggcatggtagtattagagtggttagcaaatccttccaatgatatgtatgcagatacagta
acaacagtgatccttgaagttcagtcaaaccccaaaatacagaaaggtgcagtacctaag
gtatcaaaaaaaatagaaatgcacatttacagcaagagattggagattatgcttcaggac
atatttggggaagattgtgtaagtgtcaaagaaggatccattctaagtgtcacagtggat
ggaaagactgccaatatatctttggagacacgaacagtagaatgtgaagaaggaagtgaa
gaggatgagtcccttcgagaaatggtagaacttgctgcacaaagactctttgaggccctc
acaccagttcattaa
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