Phascolarctos cinereus (koala): 110213074
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Entry
110213074 CDS
T05867
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110213074 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110213074 (TRIM71)
04121 Ubiquitin system [BR:
pcw04121
]
110213074 (TRIM71)
Enzymes [BR:
pcw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110213074 (TRIM71)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110213074 (TRIM71)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110213074 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
zf-C3HC4
DUF4094
Motif
Other DBs
NCBI-GeneID:
110213074
NCBI-ProteinID:
XP_020848973
UniProt:
A0A6P5KTC1
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MASYPDPDFQLCPQCKMCGSRASISSNSSTSPPSSQTSNSAGGGGGAGGGSGPASASSSS
SCSSSSSRRLHVLPCLHAFCRQCLEAQRHPAAAGGPPGEPLHLRCPICDQKVVLFDSPGM
DALPSSNFLLSNLLDVVAAAEEPPPPPKNNGRGVVVVGGGGGGNGGGGGGSNNRHHHHHH
HHPPPCAPAAAAAAHGWLPAAASRAPSAPSLSSSPSSSSLMLRRPHSQSDARCSSCDEGN
AASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERFGSPAAAAAAAANSTAAAAAAAAQLA
LSQTFPGSPFSILSVFPERVSYCQQHDDEVLHFYCDTCSVPICRECTMGRHVGHSFIYLQ
DALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQSEVKAVTSRHKKAL
EERECELLWKVEKIRQVKAKSLYVQVEKLRQNLSKLDSTISAVQQVLEEGRAMDILLARD
RMLAQVQELKNLRSLLKPQEDDRVMFTPPDQALYLAIKSLGFVSSGAFAPLTKATGEGLK
RALQGKVASFTVIGYDHDGELRLSGGDLMSVVVMGPDGNLFGADVSDQQNGTYLVSYRPQ
LEGEHLVSVMICNQHIKNSPFKVLVKSGRSYVGIGLPGLAFGTEGDGDGKLCRPWGVSVD
KEGYIIVADRSNNRIQVFKPCGTFYHKFGTLGSRPGQFDRPAGVACDSSRRIVVADKDNH
RIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGAFLN
KYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGSGQFL
RPQGVAVDQEGRIIVADSRNHRVQIFESNGSFICKFGAQGSGFGQMDRPSGIAVTPDGMI
VVVDFGNNRILIF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatatcccgacccggatttccagctctgcccccagtgcaagatgtgcggttcg
cgggcttccatctcctccaactcgtccacgtcgccaccgtcctcgcagacctccaactcg
gccgggggcgggggcggggctgggggcgggagcggcccggcctctgcgtcctcctcctcc
tcctgctcctcctcgtcctctcggagactgcacgtcctgccctgtctccacgccttctgc
cgccagtgtctggaggcgcagagacacccggcggcggcgggcgggccgcccggggagccc
ctccacttgcgctgccccatctgcgaccagaaagtggtgctcttcgactctccgggcatg
gacgcgctgccctcctccaacttcctcctgagcaacctgctggacgtggtggcggcggct
gaggagccgccgccgccgcccaagaacaacggccgcggggtggtggtggtgggcggcggc
ggcggaggcaacggcggcggcggcggcggcagcaacaaccgccatcaccaccatcatcac
caccatccacccccgtgcgcccccgccgccgcagccgccgcccacggctggctccccgct
gcagcctcccgcgccccgtccgccccgtccttgtcgtcgtccccgtcgtcgtcctcgctg
atgctccggcggccgcacagccagagcgacgcgcgctgcagctcatgcgacgagggcaac
gcggccagctcgcgctgtctcgactgccaggagcacctgtgtgacaactgcgtccgcgcg
caccagcgggtgcgcctcaccaaagaccattacatcgagcgtttcggcagccccgccgcc
gccgccgccgccgcggccaacagcacggcggcggcggcggcggcggcggcgcagctcgcg
ctcagccagaccttccccggctcccccttctccatcctgtcggtgttccctgagcgggtc
agttactgtcagcagcacgacgacgaggtgctgcatttctactgcgatacctgctccgtt
cccatctgccgagagtgcaccatggggcgccatgttggccatagctttatctacctccag
gatgccctccaggactctcgaacccttaccattcagctgctggctgatgctcagcaaggt
cgccaggccattcagctgagcattgaacaggcccaggctgtggcggaacaagtcgaaatg
aaagcaaaggtggtccagtctgaagtcaaagcagtcacgtcaaggcacaagaaggccctg
gaggagagggagtgtgagctgctgtggaaggtggagaagatccgacaggtcaaggccaag
tctctgtacgtgcaggtggaaaagcttcgtcagaacctcagcaagctagacagcaccatc
agcgcggtgcagcaggtcctggaggaggggcgagccatggacatcctgttggcccgagac
cgcatgttggctcaggtccaggagctgaagaacctccggagcctcctaaagccccaggaa
gatgacagagtgatgttcacccccccagaccaggccctgtacctggccatcaaatccctg
ggctttgtcagtagtggggcttttgcccccttaaccaaggccaccggggaaggcctcaag
cgcgccctgcaaggcaaggtggcctcgttcacggtgatcggctatgaccacgatggggaa
ctgcgcctttcagggggggacctgatgtccgtggtggtgatggggcccgacgggaatctg
tttggtgctgatgtcagtgatcagcagaatggtacttacctggtcagctaccggccacag
ttggaaggtgagcacctggtctccgtgatgatctgcaaccagcacataaagaacagcccc
ttcaaggtgctggtcaagtccggtcgcagctacgtcggcatcgggctgcccggcctggcc
ttcggcaccgaaggggacggcgatgggaagctgtgccgcccttggggggtcagcgtggac
aaggaaggctacatcatcgtggccgaccgcagcaacaaccggatccaggtgtttaaacct
tgtggcaccttctatcacaagtttggcacgttgggctcgaggcctggtcagttcgaccgc
cctgctggagtggcttgcgactcctcccggaggattgtggtggctgacaaggacaatcat
cgcatccagatattcacatttgaagggcagttcctcctcaaatttggggagaagggcacg
aagaacggacagttcaactacccttgggatgtagcagtgaattcggaaggcaagattcta
gtctctgatacccggaaccaccgtgtccagctgttcgggcctgatggggccttcctgaac
aagtacggctttgaaggggccctctggaagcactttgattccccccggggggtgaccttc
aaccacgaaggccatctggtggtgacggacttcaataaccaccgcctgctagttatccac
ccagactgccagtctgcccgcttcctgggatcagagggcacaggcagcgggcagttcctg
cgacctcagggggtcgcagtggaccaagaaggacgcatcatagttgccgattcgaggaat
catcgggtgcagatatttgaatccaatggcagcttcatatgcaaatttggtgctcaggga
agtggctttggccaaatggaccggccctcgggcattgctgtcactccagatggcatgatc
gtcgtggttgattttggaaacaatcgaatcctcatcttttaa
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integrated database retrieval system
