Phascolarctos cinereus (koala): 110213648
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Entry
110213648 CDS
T05867
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110213648 (LRBA)
Membrane trafficking [BR:
pcw04131
]
Endosome - Lysosome transport
Others
Others
110213648 (LRBA)
Endosome - Golgi transport
110213648 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110213648 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_1st
KNTC1_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
SUKH_6
Motif
Other DBs
NCBI-GeneID:
110213648
NCBI-ProteinID:
XP_020849686
UniProt:
A0A6P5L254
LinkDB
All DBs
Position
Unknown
AA seq
2839 aa
AA seq
DB search
MASEDNQAPSPPPTGDEGGGGGKGEEAIIDGGALSLKPGIPIRGIRMKFAVLTGLVEVGE
VTNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVNLLDKCDVTCQAEIWSMFTAILK
KSIRNLQACTEVGLVEQVLRRIDKVDNMIADLLVDMLGVLATYNLTVRELKLFFSKLQGE
KGHWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIITAIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTAVYLFSEALNAAQIFAVYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAF
TYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYSSDQVDTSVCSTLLAFIMELLKNSIAMQEQMLSSKGFLVIGYSLEKSSKCH
VNRAVLELCLAFSKYLSSLHNGVPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFI
GTVNIYNAIRRVGTVLLIMHTLKYYYWTMNPQDRSGITPKGLDGPRPNQKEILSLRALLL
MFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRN
GLRVIYKLLASTSEGIRVQALKALGYFLKHLPPKRKAEVMLGHGLFSLLAERLMLQTSVI
TITTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQVLKVIATLLRNSPQCPESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSEEQKITEMVYAIFRILLY
HAVKYEWGGWRVWVDTLSITHSKVTFEMHKENLANVFREYQGKVGEETGPGPSSPVQPIS
GVSRDAEVSEDAPQLEVKEDTSFCISSNDVGEPVRDIVESNTEQQNHILSDEERKAGKEE
HKGPDRADLEGTLTKEAECKDNLEVAPPGVKEAMSVSFDSTKVSGKGNIAGVLSIPSGED
ILDVPEILEKSTVEDDEEDYVELKVESSPSVEQQEENNPPLQLSEASILPIELQQNELSS
VVSEASEKADSEISVEALPDSDTSMEVTSSKVIAQVEGNQMLEEGKKLTDHAGETGAVIY
GHINKSETSITSEKKIAKLDVSSVATDTERLELKASTSTENSQPHRPSAEVSREQEQTGQ
EIPPTLASGQRRDSRSTMFRIPEFRWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFV
NSSDNVIFVHNTIHLISQVMDNMVMSCGGILPLLSAATSTTHELENIEPTQGLTIETSVT
FLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQCLRLVCAVAVRNCLECQQYSQLK
PSRDPAKGHRTAHSLVTTGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDI
EDSKQAQFLALAVVYFISVLMVSKYRDILEPQNEMCQPQCDDSLKESGNESGDITSTDLE
STIAVSSPLPPATMEDSPSVASVRRRNSGSGEESTLAIGSNVAVGVPAGPQCVSAGPDAI
SEVLCTLSLEVNKSQDARNDGASELDIKTVPPVPAAKNVNVKDILRSLVNMPADGVTADP
AFLPPACLGTLGDLSAEQPVQFRSFDRSVIVATKKPTISPSATTNVPTNAVSVVSSVDSN
QASDLVGASPGSGSSNAKLPAVPVVSSVPEDSVSNMSITERLEHALEKAAPLLREIFVDF
APFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELV
NEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREEEKMCDHL
IRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAPSRPREFWRLDYWEDDLRRRRRFVRN
PLGSTHPEATLKTAVEHDSDEDILAKGKQSIKSQALGNQNSESEILLDGDDDTLSSVEEK
DLESLTGPVSLSTPAQLVAPSLVVKGTLSITSSELYFEVDEEEPNFKKIDPKILAYTEGL
HGKWLFTEIRSVFSRRYLLQNTALEIFMANRVAVMFNFPDPATVKKVVNCLPRVGIGTSF
GLPQTRRISLANPRQIFKASSMTQRWQHREISNFEYLMFLNTVAGRTYNDLNQYPVFPWV
LTNYESEDLDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTAS
FVLAWLLRMEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPE
MFVNFNNYNLGVMDDGTVVSDVELPPWAKSSEEFVRINRLALESDFVSCQLHQWIDLIFG
YKQQGPEAVRALNVFYYLTYEGAVNLSSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR
SSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRL
FAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGTHRRQITDLLDQSIQVHSQCFVIT
SDNRYILVCGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLARSESYIGGNCYILSGSRDA
TLLLWYWNGKNNGIGDNPGSEMTTPRVILTGHDYEITCATVCAELGLVISGSKEGPCLIH
SMNGDLLRTLEGPENCLRPKLIQASREGHCVIYYENGIFCIFSVNGKLQATMETDDKIRA
IQLSRDGQYLLTGGDNGVVMVWQVCDLKQLFAYPGCDAGIRSMALSYDQRCIMTGMASGS
IVLFYNDFNRWHHEYQTRY
NT seq
8520 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagataaccaggccccgtccccgccaccaacaggtgatgaaggaggaggt
ggagggaaaggagaagaagccatcattgacggtggtgcgttgtcgttaaaaccaggaatc
cctatcaggggcatcagaatgaagtttgcagtgctcactggcttggtggaagttggagaa
gtaaccaatagggatattgtagaaactgtatttaacttgctggttggtggacagtttgat
ttggaaatgaactttatcatccaagaaggggaaagtattatttgcatggtgaatcttttg
gacaaatgtgacgttacttgccaagcagaaatatggagcatgtttactgccattctgaaa
aagagtataagaaatcttcaggcatgcaccgaagtgggtcttgttgaacaagtgctcagg
agaattgacaaagttgacaacatgattgcagatcttttagttgatatgttaggagtactg
gctacctataatttgactgtacgggagctaaagctgttcttcagtaaacttcaaggagaa
aaaggccattggcctcctcatgctgggaagttgctgtctgtgttaaaacacatgcctcag
aaatatggtcctgatgcctttttcaactttccagggaaaagtgctgcagctattgcatta
cctcctatagccaagtggccgtaccagaatggatttacctttcatacctggcttagaatg
gatcctgtaaataacatcaatgtggataaggataaaccttatttgtattgtttcagaaca
aacaaaggacttggctattctgctcactttgttggaggttgtttgattataactgcaata
aaatccaaaggaaaaggatttcagcactgtgtgaaatttgatttcaagccacagaagtgg
tacatggtaactatagtacacatttataaccgctggaagaacagtgagcttcgatgttat
gtgaatggagaactggcttcctatggagagataacatggttcgtcaataccagtgataca
tttgacaagtgcttcttagggtcttcagaaacagcagatgccaatagagtgttttgtggg
caaatgactgctgtttacctcttcagtgaagctctcaatgctgctcagatttttgctgtt
tatcaactagggttgggatacaagggtacttttaaattcaaagcggaaagtgacctcttc
cttgctgaacatcacaaacttttgctttatgatggcaaactttccagtgctattgcattc
acgtataatccgcgggctactgatgcccagctgtgtcttgaatcatcacccaaggataac
ccttctatatttgttcattcacctcatgctctcatgctccaggatgtgaaggcagttttg
acacattctatacaaagtgctatgcattcaattggaggagtgcaggtgctttttcctctc
tttgcccagctcgactacaggcagtattcatctgaccaggttgacacatctgtttgctcc
accctattggcttttatcatggagttgttgaaaaactccattgccatgcaagaacagatg
ctttcctctaagggcttcctggtcataggatatagccttgaaaagtcttccaaatgccat
gtcaatagagctgtacttgaactttgtttggcattttcaaaatacctgagtagtctgcat
aatggggtaccacttctcaaacaattgtgtgatcacatccttctcaatcctgcaatatgg
attcataccccagctaaggttcagttgacactgtacacttatttgtccacggaattcatt
ggcacagtcaacatatataatgcaattcggagagttgggacagtgcttctcataatgcat
acattgaaatactattactggacaatgaatcctcaggatcgtagtggcattactccaaaa
ggcctagatggacctcggcctaatcagaaggaaattctttccctccgggcattattattg
atgttcattaagcaattagtgatgaaggattctggcgtaaaagaagatgaactacaggcc
attctcaattatctacttactatgcatgaggatgacaatctaatggatgtactacagctg
ttagttgcactaatgtcagaacatcctagctctatgatcccagcttttgaccagaggaat
ggattacgagtgatctacaaacttttggcatccacaagtgaagggatcagagtacaggct
ctcaaagcattgggttactttttgaaacatctgcccccaaaaagaaaagctgaagtcatg
cttggacatggattgttctcattgctggctgaaaggctgatgcttcaaacaagtgttatc
accataaccacatacaatgttctttttgagattttgatagaacagatttgcactcaggta
atacacaaacagcatcctgatccagattcatcagtgaagatacaaaaccctcaggtacta
aaagtaattgcgactctgctgcgaaattctccccagtgtccagagagcatggaggttcga
agagcctttctttctgacatgattaaactttttaataacagcagagaaaaccgaaggagc
ttgctgcagtgctctgtgtggcaggaatggatgctttcactttgctattttaatcccaag
aattcagaggagcagaagataacagaaatggtatatgctattttcagaattctgctttac
catgccgtcaaatatgagtggggtggctggcgtgtatgggtggataccttgtcaatcaca
cattcaaaggtaacttttgaaatgcacaaagaaaacctagctaatgtgttcagagaatac
caagggaaagttggtgaagaaacaggaccaggcccctccagtccagtccagccaatctct
ggtgttagcagagatgctgaagtttcagaagatgctccacaattagaagtaaaggaagat
acctctttttgtattagcagtaatgatgttggggagccagtcagagacattgtagaatct
aatacagaacagcaaaatcacatattatctgatgaagaaagaaaagctgggaaagaagaa
cacaagggaccagatagagcagatttggagggaacactgaccaaggaagcagaatgtaaa
gacaatttagaagtagctcctcctggggtaaaagaagccatgagtgtctcttttgattct
accaaagtgagtgggaaaggtaatatagctggagtcctaagtataccttcaggagaagat
attttagatgttcctgaaattttggaaaagtctacagtggaagatgatgaagaggattat
gttgaacttaaggtagaaagtagtccctctgttgaacagcaagaggaaaacaatccacct
cttcaactgtcagaagcaagcatcttacctattgaactgcagcaaaatgagttatcttca
gttgtatctgaagccagtgaaaaagctgattctgagatatcagttgaggcattaccagat
tcagatacctcaatggaagtgacttcttccaaagtcatagcccaagtagaaggcaaccag
atgttagaggaaggaaagaaactgactgaccatgctggtgaaactggagcagttatttat
ggacatatcaacaaatcagaaactagtattacctctgagaaaaagattgccaagttggat
gtttccagtgtagctacagatactgagagactggaattaaaggccagtacaagcacagaa
aattctcagcctcataggcccagtgctgaggtgtcaagagaacaggaacaaacaggacaa
gaaataccaccaactctagccagtggacaaagaagagattccagatctactatgtttcgt
attcctgagttcaggtggtcccaaatgcaccagcgtttgctcacagacttgttgttttcc
atagaaacagatatacagatgtggagaagccattcaacaaagacagttatggactttgtg
aatagcagtgataatgtcatctttgtacataacacaatccatctcatctctcaagtaatg
gacaatatggtcatgtcttgtggaggtatattgccgttgctttcggcagctacatctaca
acacatgagttggagaatattgaaccaactcagggtcttacaatagagacctctgtgaca
tttttgcagaggttaatcagtcttgtagatgtgttaatttttgcaagttctcttggcttt
acggaaattgaagctgagaaaaatatgtcatctggaggaattttgcggcagtgcctcaga
ctggtttgtgcggtggcagtaagaaattgtttagagtgtcagcagtattcgcaactgaaa
cctagtagagacccagcaaaaggacatagaacagcacatagtttggtaaccactggaaag
tctgcagcaaagagtccagtagatattgtaactggtggtatatctccagtgagagatctt
gacagacttctacaagacatggatattaaccgacttagagcagttgtcttcagagatata
gaggatagtaaacaagctcagttcctggccttggctgtagtatactttatctctgtcctc
atggtatcgaagtacagagacattctggaacctcaaaatgaaatgtgccagcctcaatgt
gatgactctttgaaagaatctggcaatgaaagtggtgatataacttcaactgatttagaa
tccacaatagcagtcagcagtccattgcctccagcaacgatggaagactctccaagcgtg
gcatctgttcgaagaaggaattctggtagtggggaagaatcaactttggccataggaagt
aatgtggctgtaggtgttcctgcagggcctcaatgtgttagtgcaggtcctgatgccatc
agtgaagtgctgtgcacactctctttagaagtgaataaatctcaggatgccagaaatgat
ggagccagtgagttagatatcaagactgtaccccctgtaccagctgcaaaaaatgttaat
gtgaaagacattcttagaagcttggttaacatgccagcagatggagtcactgcggatcct
gcctttcttccaccagcctgccttggcactcttggtgatctttctgctgagcaacctgtg
cagttccgatcctttgacaggagtgttattgttgcaacaaaaaaacctactatttcacct
tctgctactacaaacgtgcctaccaatgctgttagtgtggtttcttcagttgactctaat
caggcctcagacttggtgggagcatctcctggtagtggatcatctaatgcaaaattacct
gctgtcccagtagtttcttcagttccagaagactctgtttcaaatatgagtattacagag
agacttgaacatgctctggaaaaggctgctcctcttcttcgagaaatttttgtggatttt
gctccttttctttctcgtacacttttgggtagccatggacaagagttgcttatagaagga
acaagtctggtttgcatgaagtctagcagctcagttgtggaattggtcatgctcctctgt
tctcaggaatggcaaaactctatccagaagaatgcaggccttgcttttattgaacttgtc
aatgaaggaaggttgttgagccaaaccatgaaggatcacctagtaagagtcgcaaatgaa
gccgaattcattttgagcagacagagagcagaggatattcacaggcatgcagaatttgag
tcattgtgtgctcagtattctgctgataaacgagaagaggagaagatgtgtgatcactta
ataagagcagcaaagtatcgggaccatgtgacagcaactcagctaatccagaaaattatc
aatatacttacggataagcatggagcctggggaaattctgcaccaagtcgtcctcgtgag
ttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaac
cctcttggatcgacacatcctgaagcgacactaaaaacagccgtggaacacgattcagat
gaagatatccttgctaaaggaaaacagtccatcaagagtcaggctttaggaaatcagaac
tcagaaagtgagattctcttggacggcgatgatgataccctgtcatccgtggaggagaaa
gatttagagagtcttaccggtcctgttagcctgagcacaccagctcaacttgtggcccct
tctctagtggtaaagggcactctttccatcacctcttctgaactctattttgaagtggat
gaagaagagccaaacttcaagaaaattgaccccaagattctggcatatactgaaggacta
catggaaaatggctgttcacagaaattcggtcagtattttccaggcgctatcttttgcag
aatacagcactagagatcttcatggcaaacagagttgctgtaatgttcaactttccagac
cctgctacagtaaagaaagtggtcaattgtctaccccgtgttggcattggaactagtttt
gggttgcctcaaaccaggcgtatttcattagcaaatccacgtcaaatttttaaagcttcc
agtatgactcaacgatggcagcaccgggagatttctaattttgagtatttgatgtttctc
aacactgtagcaggacgtacctacaatgatttaaatcagtatcctgtattcccctgggtg
ttaactaactatgaatcagaagatctggatcttacattgccaagcaacttcagggatttg
tccaagcccataggagctctgaatcccaaaagagcagcattctttgcagagcgttatgaa
tcatgggaagatgatcaagttccaaagttccactatggcactcattactcaactgcaagc
tttgtgcttgcatggttgctaagaatggaaccttttacaacttatttcctgaatttgcaa
ggtggaaaatttgatcatgcagatagaactttttcatctatttcaagagcatggcgtaat
agtcaacgtgatacatctgatatcaaggagttgatccctgaattttattatcttcctgag
atgtttgtcaacttcaataattataatcttggagtgatggatgatgggacagtggtgtct
gatgttgaacttcctccatgggccaaaagttcagaagaatttgttcgcataaacagattg
gccttagagagtgactttgtttcctgccagcttcaccagtggatcgatctcatttttggc
tataaacagcaagggccagaggcagtccgagcccttaatgtattctattacctgacgtat
gagggagctgtcaatctgagttcaataacagatcctgtgttgagagaggctgtcgaagct
caaatccgaagttttggacaaaccccttcccagctgcttatagagccacatcctcccaga
agttctgccatgcaggtgtatctcctcctgcagagtccattgatgttcacagaccaagct
cagcaggatgttatcatggtcctaaagttcccatccaactcccctgtcactcatgtagca
gccaacacccaacctggcttggctactcctgctgtgatcacagtcactgctaacaggcta
tttgctgtgaacaagtggcacaaccttcctgctcatcaaggtgctgtacaggaccagcca
taccagctgccagtggaaatcgatcctctcatagctagcaatacaggaacgcacaggagg
caaatcactgaccttttagaccagagtattcaggtccattcccagtgctttgtcatcact
tctgacaaccgctatattcttgtctgtggtttctgggacaagagtttccgggtctattct
acagacacaggaaaattgatacaagtggtatttggacattgggatgtcgtcacttgcctt
gcccgatctgagtcatacattggaggaaactgttacattctctcagggtctcgagatgca
acactccttctctggtattggaatgggaaaaacaatggaattggagataacccaggcagt
gaaatgaccactccccgagttattttgaccggccatgactatgagatcacttgtgctaca
gtttgtgctgaacttggcctagtaataagtggttctaaagaaggaccatgccttatacat
tctatgaatggagacttgttaaggactctggagggtcctgaaaactgcttgagaccaaaa
ctcatacaggcttcaagagagggtcactgtgtcatatactatgaaaatggcatcttctgt
atattcagtgtgaatggaaaacttcaggccaccatggaaacagacgacaagatcagggca
atccagctaagccgagatggccagtacttgctcacaggaggagacaatggagtcgtcatg
gtatggcaggtgtgcgacctcaaacaactctttgcttacccagggtgtgatgctggaatt
cggtccatggccttatcttatgatcaaaggtgcatcatgaccggcatggcgtctgggagc
atagtacttttctacaatgactttaaccgatggcatcacgagtaccaaacccgatactga
DBGET
integrated database retrieval system
