Phascolarctos cinereus (koala): 110213722
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Entry
110213722 CDS
T05867
Symbol
CHD4
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03082
ATP-dependent chromatin remodeling
pcw05165
Human papillomavirus infection
pcw05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110213722 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110213722 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110213722 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110213722 (CHD4)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110213722 (CHD4)
Chromatin remodeling factors
NuRD complex
110213722 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
110213722
NCBI-ProteinID:
XP_020849787
UniProt:
A0A6P5KWT6
LinkDB
All DBs
Position
Unknown
AA seq
1911 aa
AA seq
DB search
MASGLGSPSPCSAGSEEEDMEVLLNSLPPPHPENEEDPEEDLSEAETPKLKKKKKPKKPR
DPKIPKSKRQKKERVLLCRQLGDSSGEGPEFVEEEDEMVLRSDSEGSDYTPGKKKKKKLG
PKKEKKSKSKRKEEEEEDDDDDDSKEPKSSGQLLEDWGMEDIDHVFSEEDYRTLTNYKAF
SQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMV
TATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKASPRVPDAKKPKPKKVAPLKIKLGGF
GSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRATKKKKKGEEEVTA
VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW
EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLP
EIPNGEWLCPRCTCPSLKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPER
QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNK
DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEV
QDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDA
TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVS
APLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEA
SVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT
GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKAD
VFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNH
PYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDL
LEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTV
IIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRP
GLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRN
QDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHH
YEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERS
EAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTT
QWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSL
IRKKVQEFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPPD
DGVKAEENNNKEEENTEGEREVKPAAPETSVEGTQPSASNPEEEKVLVEPLEGEEKVDKP
EVKEKTEETMETETKGVAETEKVEEKSAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETPK
DLGDEKQKKNMKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGI
INHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRR
AAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELL
SDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRGPEPTPQQVAQQQ
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggcctgggctccccatccccctgctcagcaggcagtgaggaagaggacatg
gaggtgcttctaaacagccttcccccaccccacccagagaatgaagaagacccagaggaa
gacttatcagaggcagagactcctaaactcaaaaagaagaagaagcctaagaaaccccgg
gatcctaaaatcccaaagagcaagcgacaaaaaaaggagcgtgtgctcttatgccggcag
ctgggagacagttctggggaggggcctgagtttgtggaagaagaagatgagatggttttg
cgatcagacagcgagggcagtgactatactcctggcaagaaaaagaagaagaagcttgga
cctaagaaagagaagaaaagcaagtctaagaggaaggaagaggaagaagaggatgatgat
gatgatgactcaaaggagcccaagtcctcaggtcagctactggaagattggggcatggag
gacattgaccacgtgttctcagaagaagattaccgcacccttaccaactataaggcattc
agccagtttgtccgacctctcattgctgctaagaaccccaaaattgcagtttccaagatg
atgatggttctaggggccaagtggcgagagttcagcaccaacaaccccttcaagggcagt
tcaggggcctcagtggcagctgcagctgctgctgctgtggctgtggtggagagtatggta
actgcaaccgaagttgctcctcctccaccccctgtggaagtacccatccgaaaggccaaa
accaaggagggcaaaggtcctaatgcccgacggaaacctaaagctagcccccgtgtgcct
gatgctaagaagcccaaaccgaagaaggtggcacctctgaaaatcaaactgggaggcttt
ggctctaaacgcaagaggtcttcgagtgaagatgatgacctggatgtggaatctgacttt
gatgatgctagtatcaacagttactccgtgtcagatggttcaactagtcggagcagccgc
agccgcaagaaactcagagctaccaaaaagaaaaagaaaggcgaggaggaggtgactgct
gtggatggttatgagacagaccaccaggactactgtgaagtgtgccagcaaggaggcgag
atcatcctgtgtgatacctgtccccgtgcttaccacatggtttgcctggatcctgatatg
gagaaggccccggagggcaagtggagttgtccacactgtgaaaaggagggtatccagtgg
gaggcaaaggaggacaactctgagggtgaagaaatcctagaagaagttggtggtgaccct
gaggaggaggatgaccatcacatggagttctgccgtgtctgcaaggatggtggggaacta
ctctgctgtgacacctgcccctcctcctaccatatccactgcctgaatcccccacttcca
gagatccccaatggcgaatggctttgtcctcgttgcacatgcccttcactgaaaggtaaa
gttcagaagatcctgatctggaaatgggggcagccaccatcccctacaccagttccccgg
ccccctgatgctgaccccaatactccttcccctaagcctttggaggggcgacctgaacgg
caattctttgtgaagtggcaaggcatgtcctactggcactgttcttgggtgtcagaacta
cagctggagcttcactgccaagtgatgttccgcaactaccagcgcaagaatgatatggat
gaaccaccatctggagactttggtggggaggaagaaaaaagccgtaaacgaaagaacaaa
gaccccaagtttgcagaaatggaggaacgtttctaccgctatgggataaaacctgagtgg
atgatgattcatcgaatcctcaaccacagtgtggataagaagggtcatgttcactatttg
atcaaatggagggacttgccctatgatcaggcatcctgggagagtgaggatgtagaggta
caagactatgacctgttcaagcagagctactggaaccatagggagctaatgcggggtgag
gaaggacgacctggcaaaaagctcaagaaggttaagctgaggaagttggagaggccccct
gaaacccctacagttgatccaacagtgaagtatgagcggcagccagagtacttagatgcc
actggtgggactttacatccctatcagatggagggattgaactggttgcgcttctcctgg
gcccagggcactgacaccatcttggcagatgaaatgggcttgggcaagactgttcaaaca
gctgtcttcctctattctttgtacaaggagggtcattcaaaaggccctttcctagtgagt
gccccactttctacaatcatcaactgggagcgagagtttgagatgtgggctccagacatg
tatgtggtaacctatgttggggacaaggatagtcgtgccattatccgtgaaaatgagttc
tcttttgaagacaatgctatccgtggtggcaagaaggcttcaagaatgaagaaagaagca
tctgtgaagtttcatgtgttgctgacttcctatgaactgatcaccattgacatggccatt
ctgggctccattgattgggcctgcctgatcgtggatgaggctcataggcttaagaacaat
cagtctaagtttttcagggtcctcaatggctactccctccagcacaagttactactaacg
gggactcctctacagaataacttagaggagctcttccacctgcttaatttcctcactcca
gaaaggttccacaacctggagggtttcttagaggagtttgctgacattgccaaggaggac
cagatcaagaaattgcatgacatgttggggcctcatatgctgcggcgacttaaagctgat
gtcttcaagaacatgccctccaagacagagctgattgtgcgtgtggaactgagccccatg
cagaagaaatactacaagtacattctaacccgaaactttgaagcactcaatgctcggggt
ggtggcaatcaggtttccctacttaatgtggtgatggatctcaaaaagtgctgtaaccac
ccttacctcttccctgtagctgccatggaagcaccaaagatgcccaatgggatgtatgat
ggcagtgccctaattcgagcatcagggaagctacttttattgcaaaaaatgctcaagaac
cttaaagagggtggccaccgtgtgctcattttctcacagatgactaagatgttggacctg
ttagaggattttttggaacatgaaggttataagtatgagcgaattgatgggggaattact
ggaaacatgcgtcaggaggccattgaccgctttaatgcacctggtgctcagcagttttgc
tttcttctttctactcgagctgggggcctgggaatcaatctggctactgcagatactgtt
atcatctatgactctgactggaaccctcataatgacatccaggcttttagcagagcccat
cgcattggtcagaataagaaagtgatgatctaccgttttgtgacccgtgcttcagtagag
gagcgcatcacacaggtggcaaagaagaagatgatgcttacacatcttgtagtaaggcct
ggcctaggctctaagactggctccatgtccaagcaggagcttgatgatatcctcaagttt
ggtactgaggagctatttaaggatgaagccactgatggaggaggagacaataaggaagga
gaagacagtagtgttatccactatgatgacaaggccatagagcgactactggatcgaaat
caggatgaaacagaagacacagaacttcaaggcatgaatgaatacttgagttccttcaag
gtggcccagtatgtggtgcgggaagaagaaatgggggaggaagaagaggtagaacgagag
atcatcaagcaggaagaaagtgtggatcctgactactgggagaagctgctgcggcaccat
tatgagcagcagcaggaggatctggcccgaaacctaggcaaagggaagcgaatccgtaag
caggtcaactacaacgatggctcccaggaggatcgagattggcaggatgaccagtcagac
aatcagtccgactactcagtggcctcagaggaaggcgatgaggactttgatgaacgttca
gaagcacccagacggcctagccgcaagggcctgcgaaacgataaggacaaaccattgcct
ccattattggctcgtgttggtggaaacattgaggtacttggcttcaatgcccgccagcgg
aaggctttcctcaatgccattatgcgttatgggatgcctcctcaggatgcctttactacc
caatggcttgtgcgggacctgaggggcaagtcagagaaagagttcaaggcttatgtgtct
ctgtttatgcgtcacctttgtgagccaggagcagatggggctgagacctttgctgatggt
gtcccccgtgagggcttgtcccgccagcatgtccttactcgtattggtgttatgtcactc
atccgaaaaaaggttcaggagtttgagcatgtcaatgggcgctggagcatgcctgagctg
gctgaagtagaagagaacaagaagatgtcacagccaggatcaccttcccctaaaactccc
acaccttccactccaggagacacacaacccaacactcctgcacctgtaccaccccctgat
gatggggtgaaagcagaggagaacaacaacaaagaagaagagaacacagagggagagaga
gaagtgaaacctgcagctcctgagacatctgtggagggcacacagccctctgcatctaac
ccagaagaggaaaaggttctggttgagcctctggagggagaagagaaggtggataagcca
gaagtcaaagagaagactgaggagaccatggagacagaaaccaaaggtgttgctgaaacg
gaaaaggtagaggagaaatcggcagtggatctgaccccaattgtggtggaagacaaagaa
gagaagaaagaagaagaagagaaaaaagaagtgatgcttcagaatggggagactcccaag
gacctgggtgatgagaagcaaaagaagaacatgaagcagcgttttatgttcaacattgca
gatggcggctttactgagctgcattccctttggcagaatgaggaacgggcagccacagtc
acaaagaagacgtatgagatctggcatcggcggcatgactactggcttctggctggcatt
attaaccatggctatgcccggtggcaggacatccagaatgacccacgctatgccattctt
aatgagcccttcaaaggtgaaatgaatcgtggtaacttcttggagataaagaacaaattc
ctagccagaagatttaagctcttggaacaagccctggtgattgaggaacaactgcgtcga
gcagcttatctgaacatgtcagaggacccctcccatccttccatggcactcaatacccgt
ttcgctgaggtggaatgcttggctgaaagccaccagcacctgtctaaggaatcaatggca
ggaaataagccagctaatgctgtcctgcacaaagttctgaaacaactggaggaattgttg
agtgacatgaaggctgatgtcacgaggctgccagccaccattgcccgtattccccctgtg
gctgtgcggctacagatgtcagagcgtaacatccttagccggctggcaaaccggggcccc
gaacccaccccacagcaggtagcccagcagcagtga
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