Phascolarctos cinereus (koala): 110214091
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Entry
110214091 CDS
T05867
Symbol
SMARCA4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03082
ATP-dependent chromatin remodeling
pcw04714
Thermogenesis
pcw05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110214091 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110214091 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110214091 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110214091 (SMARCA4)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110214091 (SMARCA4)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110214091 (SMARCA4)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110214091 (SMARCA4)
Chromatin remodeling factors
BAF complex
110214091 (SMARCA4)
PBAF complex
110214091 (SMARCA4)
GBAF(ncBAF) complex
110214091 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
110214091
NCBI-ProteinID:
XP_020850401
UniProt:
A0A6P5L456
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPPQG
PGGYPQDNMHQMHKPMDSMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSAPQMSSGPGGVPLDGSDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPGQGPGPGPGP
GPGPAPPNYNRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPTLPVDEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVS
QALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEM
GLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR
RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHY
VAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEET
ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG
SEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGK
FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT
FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV
LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH
STGSGSASFAHTAPPPMCLNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLD
RRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDS
LTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDDSKK
QKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYE
LIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTS
VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccagacccacccttgggaggaacgcctcggccaggaccctctccaggacct
ggcccatctcctggtgctatgctgggccctagtcctggaccctcacctggttctgcacac
agcatgatgggccctagccctggcccaccttcggcaggacatcctatacctcctcagggt
cctggaggctatcctcaagataatatgcatcaaatgcataagccaatggattccatgcat
gagaagggaatgtcggatgatcctcgatataaccagatgaaagggatgggaatgaggtct
gggggacatgcagggatggggcctcctccaagcccaatggatcagcattctcaaggttat
ccctctcctctgggtggctctgagcatgcctcaagtcctgttccagctaatggcccatct
tcagccccccagatgtcatctggtcctggtggggtaccattagatggtagtgacccacaa
gcattaggacaacaaaaccgtggcccaacgccttttaatcaaaaccagcttcatcagctc
agagctcaaattatggcttataaaatgctggccagaggacaacctttaccagatcacctg
cagatggcagtgcagggaaaaagaccaatgccaggaatgcagcagcaaatgccaacacta
cctccaccctctgtatctgggacaggaccaggacaaggaccaggacctggacctgggcct
ggtccaggacccgcacctccaaattataacagacctcatggtatgggagggccaaacatg
ccccctcctggaccctcaggagttcccccaggaatgcctggacagcctcctggcggaccc
ccaaagccctggcctgaaggacccatggcaaatgctgcagcccccactagcacacctcag
aaactgattcctccccagccaactgggcgtccttcaccagcaccccctgcagtacctcct
gcagcttctcctgtcatgccaccacagacacagtcccctgggcagccagcccagcctgcc
cccatggttcaactccatcagaaacagaatcgaatcactccaattcagaagccaagagga
cttgatccagtagaaattttgcaagagagagagtatagattacaggcccggattgcccat
cgaattcaggaacttgaaaaccttcctgggtccttggctggagacttgagaacaaaagca
accattgagctcaaagcactcagactgctaaacttccagagacagctgcgtcaggaagtt
gtggtatgcatgagaagagacacggccctggaaactgcactgaatgccaaggcttacaaa
cgcagtaagcggcagtcccttcgtgaggctagaataacagagaaactggagaagcagcaa
aagattgaacaagagcggaaacgccggcaaaagcaccaggaatacctcaatagcattctt
caacatgccaaggatttcaaagaataccatcgatctgtcactggcaaaatccaaaaactt
acgaaagcagtggctacgtatcacgccaatactgagcgggagcagaagaaagagaatgag
cgaattgagaaagagagaatgcgaagactgatggctgaagatgaagaaggatacaggaag
cttattgaccagaaaaaagataagcgcctagcatacctccttcagcaaacagatgaatat
gtagctaaccttacagaactggtccgacaacacaaggctgcacaggttgctaaggaaaaa
aagaagaaaaagaaaaagaagaaggcagagaatgcagaagggcaaacacctgccattgga
ccagatggcgagcctttggatgaaaccagtcagatgagtgatctccctgtgaaagtgatc
catgtagaaagtgggaaaatcctcactggcacagatgcccccaaagcaggacaattggaa
gcatggcttgagatgaatccaggatatgaagtagcaccaagatctgatagtgaagagagt
ggttcagaagaggaggaagaggaagaagaggaagagcagccacaaccagcacagcctacc
ctccctgtggatgaaaagaaaaagatcccagatccagacagtgacgatgtctctgaagtg
gatgcaagacatattattgagaatgccaagcaagatgttgatgatgagtatggtgtctcc
caggcccttgctcgtggtctgcagtcatattatgctgtggcccatgcagtcactgaaagg
gtggacaaacagtctacacttatggtgaatggtgtactcaaacaataccagattaagggt
ttggagtggctggtgtccttgtataataataatctgaatgggatcctggcagatgaaatg
ggccttggcaaaactatccagacaattgctttaattacatacctcatggaacacaagcgt
atcaatggacctttcctcatcatagtacctctttcaactctgtcaaattgggcatatgaa
tttgataaatgggctccttctgtggtgaaggtctcctacaagggctctccagcagcaaga
cgagcttttgtacctcagcttcgaagtgggaaattcaatgtcttactaactacttatgaa
tatattataaaagataagcacattcttgccaagattcgctggaagtatatgattgtagat
gaaggtcacaggatgaagaatcaccactgtaaactaacacaggtcctgaacacacactac
gtagctccacggcgcctgctgctgacagggacgcccctgcagaacaagctacctgaactg
tgggcgctgctcaatttcctcctcccaaccatcttcaagagctgcagcacctttgaacaa
tggtttaatgctccctttgccatgacaggagaaaaagtagacctgaatgaagaagaaact
attctgattatccgacgtttacacaaagtgctacgtcctttcctgctcagacggttaaag
aaagaagttgaagcccaattacctgaaaaggtggagtatgtgatcaagtgcgatatgtct
gcgctgcagcgagtcctctaccggcacatgcaggccaagggcgtgctcttgacagatggc
tcagagaaggacaagaagggcaagggtggcaccaagacactgatgaacacaatcatgcag
ctaaggaagatctgcaaccatccttacatgttccagcacatagaggagtcattttctgag
catttgggatttactggaggcattgtccaaggcttggatttatatcgagcctctggaaag
tttgaactcctggatcgaattcttcccaagctccgagctaccaaccataaagtgctgctc
ttctgccagatgacctctctcatgaccatcatggaagattactttgcatatcgtggcttt
aaatacctcaggcttgatggaaccacaaaagctgaagaccggggtatgttgctgaaaacc
ttcaatgaaccaggctctgagtatttcatttttctcctgagtactcgggccgggggtctt
gggctgaacctccagtctgcagatactgtgataatttttgacagtgactggaatcctcac
caggacttacaagcacaggaccgtgcccatcgtattgggcagcaaaatgaggtccgggtc
ctccgtctttgcacagtcaatagtgtggaagagaagatcttggcagcagccaaatacaag
ctaaatgttgatcagaaggttatccaggctggtatgtttgaccagaaatcctccagccat
gagagaagagctttcctccaggcaatcctagagcatgaggaacaggatgagagcagacac
agcacgggcagcggcagtgcaagcttcgcccacactgcccctccgccaatgtgcctcaac
cctgacttggaggaaccacctctaaaggaagaagatgaagttccagatgacgagactgtt
aatcagatgatcgcccgacatgaagaggagtttgatcttttcatgcgcatggatttggat
cgtaggcgagaggaagctcgaaatcccaaaagaaagccacgcctgatggaagaagatgag
cttccgtcttggatcattaaggatgatgctgaagttgagaggctgacctgtgaggaagaa
gaagaaaagatgtttgggcgaggctcccgccaccgtaaagaagttgactacagcgactca
ctgaccgagaagcagtggctcaagaccttgaaggccatagaggaaggtacactggaggaa
atcgaggaagaagtccggcagaagaagtcatctcggaagcgcaaacgggacagcgatgcc
ggctcttcaacaccaacaaccagtactcgcagccgtgacaaggatgatgatagcaaaaag
caaaagaaacgtggcagaccccctgctgaaaagctctctccaaacccaccaaacctcacc
aagaaaatgaagaagattgtggatgctgtgatcaaatacaaagacagtagtagtggacgc
cagctgagcgaggtgttcattcagcttccttcccgcaaagagctgccagagtactacgag
ctcatccgaaaacctgtggacttcaagaaaataaaggagcggatccgcaaccacaagtac
cgcagcctcaatgatctagagaaggatgtgatgcttctgtgtcagaatgcccagaccttc
aacctggaaggctcactgatttatgaagactcaattgtcctgcagtctgttttcaccagt
gtgagacagaaaattgagaaagaggatgatagcgaaggagaagaaagtgaagaggaggaa
gaaggagaagaggaaggatctgaatctgagtctcgctccgtcaaagtgaagattaagctt
ggccgaaaagagaaagcacaagaccggttaaagggccggagacgcaccagccggggatcg
cgagccaaaccagtagtgagtgatgatgacagtgaagaagaacaagaggaggatcgctca
ggaagtggcagtgaagaagactaa
DBGET
integrated database retrieval system
