Phascolarctos cinereus (koala): 110214474
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Entry
110214474 CDS
T05867
Symbol
TNRC6A
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110214474 (TNRC6A)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110214474 (TNRC6A)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110214474 (TNRC6A)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110214474 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110214474
NCBI-ProteinID:
XP_020851091
UniProt:
A0A6P5L695
LinkDB
All DBs
Position
Unknown
AA seq
1911 aa
AA seq
DB search
MTVPEQIKPSVSQPQPANSTSGTSSATSTQNNAKRATANSQQQQQQALPRYSRGEVPPRF
RHQEHKQLLKRGHQLPTIATNLGPASKVLNTQSGGSSITSKQPVTNGEIQNKKKQPGMPP
IRDLVSHSPNQSDLNHSNLGSHYENSHWGPVSSNSDSSTNWDKVIVEGSDKEVWPSITDS
DPELTSECMDTDSASSSGSEKNLLIMASGSTSGENDGIRNGIGHSSQNKFAVGSNSNNVG
NGSNNGPWSLSHGTIISTCQVSVDAPDSKSESSNNRMNAWGTVSSSSNGGLNPSTLNSNS
NHGAWPVLENNGHALKGPVGSGNSGTNIQCSTIGQMPNNQSINSKMGGSTHDSWGNLQEN
CESEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNAVGSVQMDELPNNTGHGAWR
VSTRNHSQIQASSVTNGTSISHLSNGESKNGGSYGTTWGAYGSNYSGEKCSGPNDQANGD
TVNATLMQSGINGSVGTNFQMNGNKGGSLWESEMVNSQNVPWGSGNGVNSAGSRRGWGSS
AQNTGTNVSNGEWNKLPSNQHSNESMNGNSRKFTNGWKPTEEDDQSSATSQTNEQNIVWA
KTTGTGESEGSTESTGCREERVVGEGQSRERRKVDQHALLQSIVNRTDLDPRVLSNKGWG
ETPIKQNTAWDTETSPRGERKTDNGTEAWGRSLTQTSNSGGCVDKNNSNNTSSVSGWGDP
KPATRWGDSKGSSSQGGWEDDSAATVMVKSNQLWGNGKEEKSTWNDAQKIKQGWGDGQKS
SQGWSVSASDNWGETSRSNHWGETKKSSSGGSDSDRSVSGWNEPAKSNSFTWGNNNMNPN
NSSSWDESAKSGQSQGWGEPPKSNQPSGWGDSSKPINSPDWNKQDIGGSWGGPPSTNKPP
GTGWLGGPIPASTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNV
PNGGSRSDQQAQVHQPLASSSAMSNKESSSGSGWGEPWGEPSTPATTVDNGTSAWGKPMD
TGTNWGEPITASSSSSTWGTTSVGPQTSSKPGPKSMQDGWCGDDMPLTGNRPTAWEEEED
VEIGMWNSNSSQEVNPSLNWPPYIKKMSSKGTMKGGNKQDEAWINPFVKQFSNLSFSRES
PEETLPSNKMDLSGGMLQDKRMEIDKHSLNIGDYSRVVGKGPGSRPQISKESSMDRSPYF
DKDGIVADESQNMQFMSNQNMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSMFGV
GNTAAQPRGMQQPPAQPLNSSQPHLRAQVPPPLLSPQVPVSLLKYAPNSGGLSPLFGPQQ
VAMLSQLSQLNQLSQISQLQRLLTQQQKVQNQRSMPSGGRQQQEQQGRPLSMQQQMMQQS
RQLDPSLLMKQQTPPSQPQSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGLNS
NLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYEFM
NSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSV
INNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSSTAQSTSARNS
DSKSTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKAPLSTWDNSPLRIGGG
WGSSDARYTPDPAHYPSATPAQDTHIDGLIRWAAGPGSSWGESSSGRITNWLVLKNLTPQ
IDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFA
SEEEISRFFAQGQSLTPSPGWQPLGSSQSRLGSIDSSHSFSNRNDLNHWNGAGLSGTSSG
DLHGTSLWGTPNYSTSLWGTPNSSDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaccagaacagataaagcccagtgtaagccagcctcagcctgccaactctact
agcggcacttcctcagcaaccagcactcagaataatgccaagcgggccacagccaacagt
cagcagcaacagcagcaggccttgcctcgttactctcgtggtgaagtaccaccacgattt
cggcaccaggaacataaacagcttctaaagagaggtcatcagttgcctactatagcaaca
aacctgggacctgcttctaaagtattaaatacccagtcaggaggcagtagtataacaagt
aaacagccagtgactaatggagagatacagaacaaaaaaaaacaaccaggcatgcctccc
attcgggatttggtcagccactcccctaaccagtcagatttgaaccatagtaatctagga
tctcattatgaaaattctcactggggaccagtgtcttctaatagtgactccagcacaaac
tgggacaaagttattgtagaaggctctgacaaagaagtatggccttctatcactgacagt
gacccggagttgacttcagaatgtatggacactgactctgcctctagctctggatcagag
aagaaccttttgataatggcttcagggagtacaagtggtgaaaatgatggaattagaaac
ggtataggacacagttctcaaaacaaatttgcggtgggtagcaacagcaataatgtgggc
aatggaagtaataatggaccgtggagtctatctcatggaaccataataagcacatgtcaa
gtttctgtggatgctcctgacagcaaatctgaaagtagcaacaatagaatgaatgcttgg
ggcaccgtaagttcttcatcaaatggagggttaaatccaagcactttgaattcaaatagc
aaccatggtgcctggcctgtattagagaacaatggacatgcccttaaagggcctgtaggg
agtggtaattctggcacaaatattcaatgcagtaccataggccagatgcctaacaatcag
agtattaactctaaaatgggtggttccacccatgattcctggggaaatcttcaggaaaat
tgtgagtctgaagtaaatggtacaaggaaggtttcattcagtggacaacctcagaacctt
aacactgaaatgaatggaccaaataacactactaactttatgacctctagtttaccaaac
gctgttggttcagtgcagatggatgaactgcctaataatacagggcatggggcctggcgt
gtgagcacaaggaatcattctcagatacaggcctcttcggttacaaatggcacttccatt
tctcatcttagcaatggtgagtccaaaaatggcggctcttatggtactacatggggtgcc
tatggttctaattattccggagagaaatgttcaggccctaatgaccaagcaaatggtgac
actgtgaatgcaactctaatgcagtctggcataaatgggtctgttggcactaactttcaa
atgaatgggaataaaggaggaagtttatgggagtcagagatggtgaattcccagaatgta
ccatggggaagtggaaatggtgtgaattctgcaggaagtcgaagaggatggggaagctct
gcacaaaacactggcactaatgtatccaatggggaatggaataaactgcctagcaatcag
cattccaatgaaagtatgaatggaaatagtaggaagtttacgaatggatggaaacctact
gaggaagatgatcagagttctgctacatctcagacaaatgagcagaacatcgtttgggcc
aaaacaacaggtactggggaaagtgaaggtagtacagaaagcactggatgccgtgaggaa
agagtggttggggaagggcagagtagagagagaagaaaagttgaccagcatgcattactc
caaagcatagtaaacagaactgacttagatccacgtgtcctctccaacaagggttgggga
gagactccaatcaaacaaaatactgcctgggatactgaaacatcacctagaggtgaaaga
aagactgacaatgggacagaggcctggggacgctctttgacacaaacttctaactcgggg
ggttgtgttgataagaataatagtaacaatacctcatctgtatctggatggggagatcca
aagcctgctacaaggtggggagattctaaaggctcaagcagccaagggggatgggaagat
gattctgctgctacagttatggtcaagagcaatcaattgtgggggaatggcaaagaggag
aaatctacatggaatgatgcacaaaaaattaaacaagggtggggagatggacaaaaatca
agccaagggtggtcagtttctgccagtgacaactggggagaaacttcaagaagcaaccat
tggggtgagactaagaaatctagctcgggaggtagtgacagtgacaggtcagtatccggt
tggaatgaacctgctaaatcaaattcttttacctggggaaataacaacatgaatccaaat
aattcatctagctgggatgaatctgcaaaatctggtcagtcccagggatggggagaacct
ccaaaatctaatcaaccttcaggttggggggattcttcaaagccaatcaactccccagac
tggaacaaacaagatattggtggatcttggggaggtccaccttccacaaataagccacct
ggtacaggttggcttggtggaccaataccagcttccacaaaagaagaagaacctactgga
tgggaggagccatccccagaatcaatacgccgcaaaatggaaattgatgatggaacttct
gcttggggagatccaagcaaatataactacaaaaatgtgaatatgtggaataaaaatgtc
cctaatggtggcagccgttcagaccagcaagcacaggtacatcagccgctagcatcttca
agtgccatgtcaaacaaggagagcagtagtggttctggttggggagaaccctggggagaa
ccttctactccagccacaactgtagataatggaacttcagcatggggtaaacccatggac
actggtactaactggggggaacccattactgcttcatctagctcctccacatggggtacc
acttctgttggtccacagacttcgagcaaacctgggcctaaatctatgcaagatggttgg
tgtggagatgatatgcctttgactggaaatcgacccaccgcctgggaggaggaagaagat
gtagaaattggaatgtggaatagtaattcatcccaagaagttaacccatctttaaactgg
ccaccatatataaagaaaatgtcctcaaagggaacaatgaaaggcggaaataaacaagat
gaagcttggataaatccattcgttaagcagttctcaaatttaagtttttcgagagaatca
ccagaagaaactctaccgagcaataagatggacctatctggaggaatgttacaggacaaa
cgaatggagattgataagcatagcctaaacattggcgattacagtcgagtagtagggaaa
ggccctggctctcgtcctcagatttccaaagagtcttccatggatcgcagtccttatttc
gataaggatggcattgtagcagacgagtcccaaaacatgcagtttatgtccaatcaaaac
atgaagcttcccccttcaaatagtgcactacctaaccaagcccttggctccatagcaggg
ctgggtatgcaaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgtt
ggtaacacagcagcacaaccccggggcatgcagcagcctccagcacaacctctcaattca
tctcagcctcatctccgtgctcaagtgcctcctccattactatcccctcaggttccagtc
tcattactgaagtatgcaccaaacagcggtggcctgagtccactctttggccctcaacag
gtagccatgttgagccagctatcccagttaaaccagctttctcagatttcccagttacaa
cgattgttgacccagcagcaaaaggtgcagaatcagagaagcatgccttctggtggtcga
cagcagcaagagcagcagggtcgacctcttagtatgcagcagcagatgatgcaacaatct
cgtcagcttgatccaagcctgttgatgaagcagcaaactccaccatctcaaccacagtcg
ctccatcagcctgccatgaagtctttccttgagaatgtcatgccccacactacacctgaa
ctgcaaaaagggccatcgccaataaatgctttcagcaacttccctataggcttgaactca
aacttgaatgtaaacatggatatgaacagtattaaagagccacagtcaagactgaggaaa
tggactacagtggacagcatttctgtgaacacatcattggatcaaaattccagcaaacat
ggtgctatttcaagtggttttaggctggaagagtctccatttgttccatatgaatttatg
aacagcagtaattcaccagccagtcctcctggttcaattggggatggctggccacgtgcc
aaatcgcctaatggctctagcagtgttaactggccaccagaatttcgccctggtgaacca
tggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtc
ataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagt
gggtcatcctcatctctgaacaccacgctgccttcaactagtgcctggtcatccattcgt
gcctccaactacaatgtttccctcagcagtacagcacaaagcacttcagccagaaacagt
gattccaaatcaacatggtctcctggttcagtcactaacacctctctggctcatgagctg
tggaaggtccctttgccacctaaaaacatcactgctccgtcccgcccaccaccgggatta
actggtcagaaggcccctttgtctacatgggataattccccgcttcgtataggtggagga
tggggaagttctgatgccagatacaccccagacccagctcattatccatctgcaacgcct
gcccaagatacacatattgatggactaattcgatgggctgccggtccaggttcaagctgg
ggtgagagcagctcagggagaataacaaattggcttgttctaaaaaatcttacgcctcag
attgatggctccaccctgcgtactctgtgcatgcagcatggtcctctcataacattccat
ctgaacctcccacatggtaatgcattggtccgttacagttcaaaagaagaggtagtgaag
gcacaaaaatctctgcacatgtgtgtattggggaacactactattcttgctgagtttgcc
agtgaagaggagattagtcgtttctttgcacaaggccagtctctgactccctctcctggc
tggcagcctttggggtccagccagagccgactgggatccattgacagttcccattcattc
tccaaccgcaatgatctaaatcactggaatggtgctgggctgtcgggaactagcagtgga
gaccttcatggcacttcactctgggggaccccaaattattccacaagcctgtgggggacc
ccaaacagcagtgacaccaggggaattagcagcccatcccccatcaacgctttcctttct
gttgaccacctaggtggaggtggagagtccatgtaa
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