Phascolarctos cinereus (koala): 110214477
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Entry
110214477 CDS
T05867
Symbol
ABCA1
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw02010
ABC transporters
pcw04148
Efferocytosis
pcw04975
Fat digestion and absorption
pcw04979
Cholesterol metabolism
pcw05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110214477 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110214477 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
110214477 (ABCA1)
04979 Cholesterol metabolism
110214477 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110214477 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcw02000
]
110214477 (ABCA1)
Transporters [BR:
pcw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110214477 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
110214477
NCBI-ProteinID:
XP_020851097
UniProt:
A0A6P5L082
LinkDB
All DBs
Position
Unknown
AA seq
2260 aa
AA seq
DB search
MAFWSQLGLLLWKNFTFRRRQTCQLLLEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLSWIQGIICNANNPCFRYPTPGESPGVVGNFDKSILSRLFTDARRLLLYSQRDT
SMKDTQKLLETLQSLGTFNSSMKLQDFLVDNETFSEFLQHNLTISYPAVEEVLDTDINLQ
QALLYGYKWKLKDLCKESNLTGWIKPHNQKTGELCDLPKEKLDAAEKVFFSNVDLLKPLL
KGIHSHSLLPNQELVETMKTMLESLGKLAEELSSMKSWRDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEEVTNFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRTVMSEVNRTFQNLGVFHDLKGMWEEIS
PQIWAFMENSQEMDLIRTLLDNKISGNLWGQHLNDLNWTTSDIAAFLAKYPEDVQTASGP
VYTWREAFNETNWAIQTIARFMECVNLDKLEPIPTEVRLINKSMELLDERKFWAGIVFTG
IAPDSIELPHHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDLRYVWGGFAYLQDVV
EQAIIRTLTGSEESTGIYVQQMPYPCYVDDIFLRVMSRXMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVLILKLGNLLPYSDPSVVFL
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDHVGFSLKLFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFKSPLEEDGFSLTTSISMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEKSDEKSHLGSRQKGTSEICMEEEPSHLRLGVS
IQNLVKVYRNGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKSVKEEMEQMVLDVG
LPHKLKTKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVSEARLVEDIG
HELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDSGVDAET
SDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDVDPESRETDLLSGMDGKGSYQVKG
WKLTQQQFVALLWKRWLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQP
WMYNEQYTFVSNDAVEDAGTQKLFDALTKSPGFGTRCMEGQSILDVPCEVGEDKWTTASV
PESVLDMFQKGNWSMESPSPSCECSNDKIKKMLPVCPAGAGGLPPPQRKQNTSDILQNLT
GRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGTSNVRGLPQNNEINVAINQVKKL
FQLTKGSSADRFLNSLGSFMTGLDTKNTVKVWFNNKGWHAIGSFLNVINNAILRANLPKG
ENPSSYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALL
LLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGV
VFFLITVLIQYSFFIKPRPVIAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKVY
RSKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTEGDAFLNKNSILSNI
QEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGDWAIRKLGLVKYGEKY
AGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGV
AFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFA
KDQSDDDHLKDLSLHKNQTVVDVAILKSFLQDEKVRESYV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggccttttggtctcagctgggattgctgctttggaagaactttactttccgaagaagg
caaacatgtcagttattgcttgaagtggcctggcctctatttatcttcttcatactgatt
tctgtacgactcagctatccaccctatgaacaacatgaatgccactttccaaacaaagct
atgccatctgcaggaacactttcttggattcagggaattatctgcaatgccaacaacccc
tgtttccgctatccaacccctggtgaatctcctggtgttgttggaaacttcgacaagtcc
atactttcacgattgttcacagatgctcgaagactcctcttatatagccagagagacacc
agtatgaaggacacacagaagcttttggaaactttgcagagtctggggactttcaactca
agcatgaagcttcaggatttcctggtggacaatgaaaccttctctgaatttttgcagcac
aacctcaccatttcctatccagctgtggaggaggttctggacactgatatcaatctccag
caggctcttttatatggatataagtggaagctgaaagacctatgcaaagaatcaaactta
acaggatggattaaaccccacaaccagaaaacaggagagctttgtgacctgccaaaagaa
aaactggatgcagcagaaaaagtgttcttctctaacgtggaccttctgaaacccctcctg
aaaggaatacactcccattctctcctgccaaaccaggagctggttgaaacaatgaaaact
atgctagagagtcttggaaagctggcggaagagttatctagcatgaagagctggagggac
atgagacaagaggtgatgtttctgaccaacgtgaacagtagcagttcctccacccagatc
taccaggcagtgtctcgaattgtctgtggccaccctgaaggtgggggactgaagatcaaa
tccctgaattggtatgaggacaacaactacaaagccctgtttggaggaaataacaccgaa
gaggaggtgacgaacttctatgataattctacaactccttattgcaatgatttgatgaag
aatttggaatctagtcctctttcccgaattatctggaaggctctaaagcctctgcttgtt
ggaaagatcctgtacacccctgacaccccagccacaagaacagttatgtctgaggtgaat
agaacctttcagaacctgggtgtattccatgacctgaaagggatgtgggaagagatcagc
ccccaaatctgggcattcatggaaaacagccaggaaatggatctcatccggactctgttg
gataataaaatcagtggcaatctctggggacagcatttgaatgacttaaactggacaact
tcagacattgcagcatttttagctaagtacccagaagatgtccagacagccagtggtcca
gtgtacacctggagagaggcttttaatgagacaaattgggcaatccagaccatagctcga
ttcatggagtgtgtcaacctggacaaacttgagccaatacctacagaagttcgactgatc
aacaaatccatggaattactggatgaaaggaagttctgggctggcatagtgttcaccggc
attgctcctgatagtattgagctgcctcaccacgtcaaatacaagattcggatggatatt
gacaatgtagaaaggacaaacaagatcaaggatgcgtactgggaccctggtcctcgtgct
gatccctttgaagacttgcgctatgtctggggaggctttgcctacttacaggatgtggtg
gagcaggcgattatccggacactgacaggctctgaagagagcactggcatctatgtgcag
cagatgccttatccttgttatgtagatgatatatttctgcgggtgatgagccgcntcatg
cctctcttcatgaccctggcttggatctactccgtggctgtgatcattaaggggattgtg
tatgagaaagaagcccgactgaaggagaccatgagaatcatgggtttggacaatggcatc
ctttggtttagctggttcattagcagcctcatcccactccttgtgagtgcagggctactg
gtgttaatcctgaagctaggaaacttgctgccctacagtgaccccagtgtggttttcctg
ttcctctccgtgtttgctgtggtgaccatcttgcagtgtttcctgatcagcacactcttc
tctagagccaacttggctgcagcctgtggtgggatcatctacttcacactctacctgcca
tatgtcctttgtgttgcttggcaggaccatgtgggcttctctctgaaactttttgctagt
cttctgtcacctgtagcatttgggtttggttgtgagtactttgccctctttgaggagcag
ggcattggagtgcagtgggacaaccttttcaagagccctctagaggaagatggcttcagc
ctcaccacctcaatctccatgatgctatttgataccttcctctatggtgtgatgacctgg
tatattgagtctgtctttccaggtcaatatggaatccccaggccctggtatttccctttc
accaagtcttactggtttggtgagaaaagtgatgaaaagagtcatcttggttccaggcag
aaaggaacttcagaaatctgcatggaagaagaacccagccacctgcgcctaggggtttcc
attcagaacctggtgaaggtttatcggaatggcatgaaggtggccgtggatggccttgca
ctgaatttctatgaagggcagattacatcttttctgggacataatggagctgggaaaacc
accaccatgtccatcttgactggcttgttccccccaacctcaggcactgcctacatcctt
gggaaagatattcgttcagagctgagcactataaggcagaacctgggggtctgtcctcag
cataatgtgctttttgacatgctaacagtagaggagcacatctggttctatgcacgtctg
aaagggctgtcggagaagagtgtgaaggaagagatggagcagatggttctggatgtcggt
ttgccacacaaactgaaaactaagacaagtcagttgtctggcggaatgcaaagaaagctg
tctgtggctttggcctttgttggcggatcgaaggtggttattttagatgaaccaacagcc
ggagttgacccttactctcgcagagggatatgggaactgcttctgaagtatcggcaaggt
cgcaccatcattctctccactcaccacatggatgaggcagatatactgggtgacaggatt
gccataatttctcacgggaagttgtgttgtgttggttcctctctgtttttgaagaatcag
ctggggacaggatactatctgaccctggtcaagaaggatgtggattcctccctcagttcc
tgtagaaacagcagcagcacagtgtcttacctgaaaaaggaggacagcgtttctcagagc
agctctgatgcaggcctaggcagtgaccatgaaagtgacaccctgactatagatgtttct
gctatctctaacctcattactaagcacgtctcagaggctcggctggtggaggacattggg
catgaattaacctacgtgctgccctatgaagctgccaaggaaggagcatttgtagagctt
ttccatgaaatcgatgaccgactctccgacctgggcatttcaagttatggcatctcagag
accacgttggaggagatattccttaaagtggctgaagacagtggagtagatgcagagacc
tcagatggaaccttacctgccagaaggaacagacgtgcctttggggaccgccagagctgt
cttcgcccatttactgaagatgatgcttttgatcccaatgactcggatgtggacccagaa
tcccgagagacagacctactcagtggcatggatggtaaaggctcctaccaggtgaagggt
tggaaactcacccagcagcagttcgtagcccttttgtggaagaggtggctgattgccagg
cgtagcaggaaaggattttttgctcagatcgttttgccagcagtgtttgtctgcattgcc
ctcgtgttcagtctgattgttcctccttttggcaaataccccagcctggaactgcagccg
tggatgtacaatgaacaatatacatttgtcagcaatgatgctgtggaagatgcaggcact
caaaaactcttcgatgctctgaccaaaagccctggttttggtacccgttgtatggaagga
cagtcaattctggatgtgccatgtgaggtaggtgaagataaatggactacagcttctgtc
cctgagtctgtactggacatgttccagaaagggaactggtcaatggagagcccttcgcct
tcctgtgagtgcagtaatgacaagataaagaaaatgcttcctgtgtgccctgctggcgca
ggcggattgcctcctccccagagaaaacaaaatacatctgacatccttcagaacttgact
ggaagaaacatatcagactatctggtgaagacctatgtccagatcatagcaaaaagcttg
aagaacaagatctgggtaaatgagtttaggtatggtggcttttcattgggtaccagtaat
gtgcgtggattacctcaaaataatgaaattaatgttgccatcaaccaagtgaagaaactc
tttcagctgaccaagggcagttctgcagatcgatttctcaacagtttaggaagcttcatg
acaggactggacaccaaaaatactgtcaaggtgtggttcaataacaagggttggcatgcc
attggctccttcctgaatgtcatcaataatgccatcctcagagccaacttacccaaggga
gagaatcccagcagctatggcattactgcttttaatcaccctctgaatctgaccaagcag
caactctccgaagtggctttgatgactacttcagtagatgtccttgtttccatctgcgtg
atctttgcaatgtccttcgtcccagccagctttgttgtgttcttgatccaggagcgcgtt
agcaaagctaaacatctacagttcatcagtggcgtaaaacctgtcatctactggctttct
aactttgtctgggatatgtgcaactatgtggtacctgctacattggtaatcatcatcttc
atctgcttccaacaaaagtcctatgtatcttccaccaacctgcctgtgctggctctgctt
ctcttgctttatgggtggtcaataacccctctcatgtacccagcctcctttgttttcaag
atccccagcacagcttacgtggtcctcactagtgtgaacctcttcattggaattaatgga
agtgtggccacttttgtcttagaactcttcactaacaataagctcaacaatattaatgat
atcttgaagtctgtgttcctaatattccctcacttctgtctgggccggggactaattgac
atggtgaaaaatcaggcaatggctgatgcactagaaaggtttggagaaaaccgttttgtc
tctcccctctcctgggacttggtgggaaggaacctctttgccatggccgtggaaggagtg
gtcttcttccttatcacagtgctgattcagtacagcttcttcatcaagcccagacctgta
attgcaaaacttcctcctctaaatgatgaggatgaggatgtgaggagagaaaggcaaagg
atattggatggtggtggacagaatgatattctagaaatcaaagaacttaccaaggtctac
agaagcaagaggaaacctgcagtggacaggatctgtgttggcatcccccctggagagtgc
tttgggcttctgggagtgaacggggctggaaaatcatcaacttttaagatgctcactgga
gacacgactgtgacagaaggagatgcttttctcaataaaaacagtatcttgtcaaacatc
caagaagtacatcagaacatgggctattgccctcagtttgatgctatcacagaactgttg
acaggaagagaacacgtggaattctttgcactcttgaggggtgtccctgagaaagaagtt
ggcaaggttggtgactgggcaattcgaaaactaggccttgtgaaatatggagaaaagtat
gctgggaattacagtggtggcaacaagcgaaaactttcaactgccattgctttgattggg
ggacctccagtggtgtttttggatgaaccaaccactggcatggatccaaaggcccgtcgc
ttcttatggaattgtgccctaagtgtaatcaaggagggaaggtctgtggtacttacctct
cacagcatggaagaatgtgaagctctctgtaccagaatggcaatcatggtcaatgggaga
ttcagatgtcttggcagcgtccagcacttaaagaacagatttggagatggttatacaata
gtcgtacgaatagcaggctcaaatcctgacctgaagcctgttcaggagttctttggagtc
gcctttccgggaagtgtccttaaagagaaacatcggaacatgcttcagtaccagcttccg
tcttcactgtcttctctggccaggatattcagcatcctttcccagaacaaaaagagactc
catatagaagattattccgtttctcagacaacacttgaccaagtatttgtaaactttgca
aaggaccaaagtgatgatgaccacttaaaggacctgtcattgcacaaaaaccaaactgtt
gtagatgttgcaattctcaaatcttttctgcaagatgagaaagtgagagaaagctatgtc
taa
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