Phascolarctos cinereus (koala): 110215142
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Entry
110215142 CDS
T05867
Symbol
THOC5
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110215142 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
110215142 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110215142 (THOC5)
03041 Spliceosome [BR:
pcw03041
]
110215142 (THOC5)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110215142 (THOC5)
Spliceosome [BR:
pcw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110215142 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
110215142
NCBI-ProteinID:
XP_020852021
UniProt:
A0A6P5L8V8
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MDVQEKEACYDYFSRKSAMSTESNKKRKPKVIRSDGAPPEGKRNRSELDLDMKYYSEEAE
VDVRDPNKDYDLYRFTCHELQRLMAEIQELKSRGSRDSASEIEERRIQSCVHFMTLKKLN
RLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSM
EEFYQEAPPEISKSEITMGDPHQQTLARLDWELEQRKRLAEKYKECLANKEKILKEIEVK
KEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQAC
DKKLSVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLK
RHPLSVMLDLKCKDDSVLHLTFYYLMNLNIMTVKARVSTATEIVTPVSAGDLLSPDMILS
CLYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQHTVT
ADNSLSASHMETTMKLLRTRLQARLALTKQFASLEHGIVPVITECQRLFPAKIVSRLVKW
VAVAYEDYLDLPYTRDIVEAGLAEDTHLYYLALIERGTAKLQAAVVLNPGYSSIPPIFRL
CLNWKGEKTSSSDDNIRAMESEVSVCYRELYGPKPGHQLLTNQLQRLCVLLDVYLETESH
DTSVEGPKEFPQEKMCLRLVRGPSRMKPFKYNHPQGFFSHR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccaagagaaagaggcatgctatgactatttctctagaaagtcagccatgtcc
acagagtcaaacaaaaagcggaaacccaaagtgatccgaagtgatggagcccctccggag
ggaaagcggaatcggagcgagcttgacttggacatgaagtattacagcgaggaggctgag
gtggacgttcgagaccccaacaaggactacgacctctacaggttcacctgccatgaactc
cagcgactcatggctgaaatccaagagctcaagagcagaggcagcagggacagtgcttcc
gagatagaagagaggaggatccagagctgtgttcacttcatgaccctgaagaaactgaac
cggctggctcatatcagactgaagaaggggcgagatcagactcatgaggctaagcagaag
gtggatgcctatcacctccagctccagaacctgttgtatgaggtgatgcacctgcagaag
gagatcaccaagtgcctcgaatttaagtcaaagcatgaagaaattgagctggtaagtatg
gaagagttttaccaggaggcccctcccgagatcagcaagtctgagatcaccatgggggac
cctcaccagcagaccctcgctcgcctcgactgggagctggagcagcggaagaggttggca
gaaaagtacaaagaatgtctagccaacaaagagaagatcctgaaggagatcgaagtcaag
aaggaatacctgagcagccttcagcctcggcttaacagcatcatgcaagcctctctcccc
gtgcaggagtacctctttatgccgttcgaccaggcccacaagcagtatgagactgcccgc
caccttcccccgcccctctatgtgctgtttgtgcaggccagtgcttatgggcaggcctgt
gataaaaaattgtccgtggctatagaaggcagtgtggaagaagccaaggctctgtacaaa
ccacccgaggattctcaagatgacgagagcgactcagatgctgaggaggagcagaccaca
aaacgtcgacgccccaccctgggtgttcagctggatgacaagcggaaggagatgctcaag
agacacccgctgtctgtcatgctcgacctcaagtgcaaagatgacagcgtgctccatctg
acattttactacctcatgaacctcaacatcatgactgtgaaggccagagtgagcactgcc
acggagatcgtcaccccagtcagcgcaggtgacctgctgtctcctgacatgatcttaagc
tgcctctatccgggggatcacggcaagaagacccccaacccagctaaccagtaccagttt
gataaagtcggcatcttgaccctgagcgactacgtgcttgaactggggcacccctacttg
tgggtgcagaagctggggggcctgcacttccctaaagagcagccacagcacacagtgacc
gcggacaactcgctgagtgccagccacatggagaccaccatgaagttgctgagaacgcgg
ctgcaggcccgcctggctctcaccaaacagtttgcttcattggagcacggcattgtgcca
gtcatcactgagtgccagcgccttttccctgcaaaaatcgtgtcccgcctcgtgaagtgg
gtggcagttgcctacgaggattacctggatctgccttacacccgggacattgtggaggct
gggctggcggaggatacacacctgtactacctggcactcatcgagagagggacagccaag
cttcaggcggctgtggtgctgaacccgggctactcctccatcccacccatcttccgactt
tgtctgaactggaaaggagagaagacaagcagcagtgatgataatatccgggccatggag
agcgaggtcagtgtgtgctaccgggagctttatggccccaagcctggccaccagctcctg
accaatcagctgcagcgcttgtgtgtcctgctcgatgtctacctcgagactgagagccat
gacaccagtgtggaagggcccaaggaatttccccaggagaaaatgtgtctccgactggtc
aggggtcccagtcggatgaagccattcaagtacaaccatccacagggattcttcagccat
cgttga
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