Phascolarctos cinereus (koala): 110215441
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Entry
110215441 CDS
T05867
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110215441 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110215441 (ERCC6)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110215441 (ERCC6)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110215441 (ERCC6)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
110215441 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
110215441
NCBI-ProteinID:
XP_020852545
UniProt:
A0A6P5L439
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MEESFTLSACENRPSTSSVVGMFEVPKKGQPLLHINRQQIQSVEYSAQAVELKGLGVDVY
DQDVLEQGVLQQVDNAINEANRAAQLAEAEKEYHSVLDDLRSCTTSLKQINTIIEHLSPQ
AVNNKDISRKLDSVKRQKCNKEKQLKKIKAKQKRLQAILGGTERDIEANVVDLEEDEEPG
PSSLGSMLMPVQETEWEELIRTGQMTPFGTRIPQNQEKKPRKLMLNEASGFEKYLADQAK
LSFERKKLQKKKKKIQSSVDSNVIPASDKKEKNKTSGKQLKTDKRLKKHIKKLQRRAVQF
HSKVGFLKEKKLLEPKKSKYDQGDESEDSECVPDDELICTEEEEEEEELALHGTNKHDHK
LKFLSKHRKRQNKIPTEEIDDEYLPSSGEEESIGKNGKIKRCRDDGDEDYYKQRLRRWNK
QRLEDKEQRRKAGEESEESDAEFDEGFRVPGFLFKKLFKYQQTGVRWLWELHCQQAGGIL
GDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPAVIVCPTTVMHQWVREFHTWWP
PFRVAILHETGSYANKKVKLIREIARCHGILITSYSYIRLMQDNINNHDWHYVILDEGHK
IRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVP
ITMGGYSNASPVQVKTAYKCACVLRDAINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTD
EQRKVYQNFIDSKEVYRILNGEMQVFSGLVALRKICNHPDLFSGGPKIIKGLPDEELEES
DQFGYWKRSGKMIVVESLLKIWHKQGHRVLLFSQSRQMLHLLEVFLRAREYSYLKMDGTT
TIASRQPLITRYNEDSSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAW
RIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPRQRRFFKSNDLYELFTLSS
PDESQGTETSAIFAGTGSDVQAPKHHLKRRLQNSSPVADREGVPQADVSPERSTLSDANV
PEAIAGSSQGKYKDKGAGLNLGTCNQSSLSAEGVEAHLVEDKCAHTNAFSTSDEPSKTVM
ILRNGENLNSSCTIENFKTAGGEDLDTKQDLPCEKRSSQAKPDLNLESEQTENRFCKHKS
KTKHHLVEGKETGKHRGQKQSSHTPKHSKDAKFEGTRIPHLVRQKQYRKHDDEKEENQQK
NDDYVLEKLFKRSVGVHSVMKHDAIMEASSPDYVLVEAEANRVAQDALKALKMSRQRCLG
AVSGVPTWTGSNGLSGAPAGGKSRFGQKRNPSLPFPQSSLKSTKEKCQDADLKKEEKNII
GTHFSGKIEDGESSSGALASSSLLAKMRTRNHLILPQKTENENVNLQQASAPLPTATEHD
DLLVEMRNFIAFQARVDGQASTQEILQEFESKLSTSQSCVFRELLRNLCTFHRGLNGEGV
WKLKPEFC
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagttttaccttatctgcttgtgaaaataggccatccacttcttcagtggtt
ggtatgtttgaagtcccaaagaaaggacagccattgttgcatataaacagacagcaaatt
cagtctgtagagtacagtgctcaagcagttgaactcaaaggtttgggagttgatgtctat
gaccaagatgtgttagagcaaggagtgcttcagcaggtagataatgcgattaatgaagct
aacagagcagctcaactagctgaagcagaaaaagagtaccattcagttttagatgatctc
aggtcatgtacaacatctctaaagcaaattaatacaattattgagcatcttagtcctcaa
gctgtcaacaacaaagacatcagcagaaaactagattctgtaaagagacagaaatgtaac
aaggaaaaacaactaaagaagattaaagccaaacaaaaacgtcttcaagccatccttggt
ggaacagagagagatattgaagcaaatgttgtggatttagaagaggatgaagagcctggg
ccatcatctcttgggagtatgctcatgccagttcaggaaactgaatgggaagagctcatt
cggactggccagatgaccccctttggtacccgtattcctcagaatcaagagaaaaagcct
agaaaattaatgcttaatgaagcgtcaggctttgaaaaatatttggcagatcaggcaaaa
ttatcatttgaaaggaagaagctgcagaaaaaaaagaagaaaattcagagttcagttgat
tcaaatgtgatcccagcttcagataaaaaagaaaagaacaagaccagtgggaagcagttg
aaaacagataagcgtttgaaaaaacatatcaagaaacttcaaaggagggctgttcagttc
cacagtaaagtaggatttctaaaggaaaagaaactattggaaccaaagaagtccaagtat
gatcaaggagatgaaagtgaagattcagagtgtgtacctgatgatgaacttatctgcact
gaagaggaggaggaagaggaagaactggcacttcatggtacaaataagcatgatcataag
ctgaaatttttatctaagcacaggaagaggcagaataaaattccaacggaggaaattgat
gatgaatatcttcctagctctggagaagaagaatccataggaaaaaatggcaaaatcaag
agatgccgagatgatggagatgaagattattataaacaacggttaaggaggtggaataaa
cagagattggaggacaaagagcagcgtagaaaggctggagaagaatctgaggaaagcgac
gctgaattcgatgaaggttttagagtgccaggttttttgttcaaaaagctatttaagtac
cagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaattctg
ggagatgagatgggattgggcaagaccatccagataattgccttcttggcaggtctgagc
tacagcaagatcaggactcgtggttcaaattacagatttgagggattgggtccagctgta
attgtatgtccaacaacagtaatgcatcagtgggtgagagaatttcatacttggtggcct
ccatttagagttgcaattttacatgaaactggatcatatgcaaacaaaaaggtgaaactc
atccgagaaattgcaagatgtcatggaattttaattacttcatattcctatattcgattg
atgcaagataacattaacaatcatgactggcattatgtgatcttggatgagggacacaaa
atccgaaacccaaatgctgcagttacacttgcttgcaaacagttccgtactcctcatcgg
attatcttgtctggatctcctatgcaaaataacctcaaagaactatggtctctctttgac
tttgtcttcccgggaaaattgggaacgttgccagtgttcatggaacaattttctgttccg
attaccatgggggggtattcaaatgcttctcctgtacaggttaaaactgcttataaatgt
gcgtgtgttttacgagatgccataaacccatacctactgcgtagaatgaagtcagatgtg
aaaatgagcctttcattgccagataaaaatgagcaggtcttattttgccgcttgacagat
gagcaacgtaaagtatatcaaaacttcatagattccaaagaagtctacagaattcttaat
ggagaaatgcaggttttttcaggacttgtagcattacgaaaaatatgcaatcaccctgat
ctcttctctggaggccccaagattataaaaggtcttccagacgaagaattagaggaatct
gaccagtttggctactggaaacgctctgggaaaatgatagtggttgaatctttgctaaaa
atatggcacaaacagggtcatcgagtgttattgttttctcagtcaagacagatgctacat
ttacttgaagtctttcttagagcacgagaatattcctacctcaagatggatggtactact
acaatagcttcaagacagccacttatcacgagatacaatgaggactcttccatatttgta
tttcttcttaccactcgtgtgggtggcataggagtcaacttgacgggagcaaacagagtt
atcatttatgaccctgactggaaccccagcacagacacacaggctcgagagcgtgcttgg
agaataggccagaagaaacaagtgactgtttataggctccttactgcaggtaccattgaa
gaaaagatttatcacaggcaaatcttcaagcagtttttaacaaacagaatactgaaagat
cccagacaaagacgtttttttaagtccaatgatctttatgagctgtttactctcagcagt
cctgatgaatctcaaggcactgaaactagtgctatttttgcaggaactggctcagatgtt
caggcacctaaacatcatttgaaaagaagacttcaaaactcctctcctgttgctgacaga
gaaggtgtgcctcaagcagacgtttctcccgaacgcagcacgttatctgatgccaacgtt
cctgaagccattgctggctcatctcaagggaaatacaaggataaaggagcaggtttaaat
ttaggaacttgtaaccaaagcagcctttcagcggagggtgttgaagctcatcttgtagaa
gataaatgtgcacatacaaatgcattttccacatcagatgaaccttcaaagactgtaatg
attttaaggaatggggaaaatttaaactcttcatgtaccattgaaaacttcaagacagct
ggtggtgaagatttagatacaaagcaagaccttccttgtgagaagagaagctcgcaggcc
aaaccagatctcaacctcgagagtgagcagactgagaaccggttctgtaaacacaagtca
aaaacaaagcatcatcttgtggagggaaaggagactggaaagcaccgagggcagaaacag
agctctcacacacccaaacattccaaagatgccaagtttgaaggaacacgcatcccacac
ctggttagacaaaaacagtaccggaagcatgatgatgagaaagaagaaaatcagcaaaaa
aatgatgattatgttttggaaaagcttttcaaaagatcagtaggagttcacagtgtcatg
aaacatgatgctattatggaagcttccagtccggattatgtgttagtggaggcagaggca
aatcgagtagcccaggatgcattgaaagcactgaagatgtctcgtcaacggtgtttgggg
gctgtctctggtgtgcccacgtggacaggcagtaatggtctgtcaggtgcaccagctgga
ggaaagagtagatttgggcagaaaaggaatcctagcttgccttttccacagtcttcttta
aagtctacaaaagagaagtgtcaggatgctgatctaaagaaagaagaaaaaaatatcatt
ggaacacattttagtgggaaaatagaagatggagaatcttcatctggtgctttagcttca
tcatcactgttagctaaaatgagaactagaaaccatcttattttgccacagaaaacagaa
aatgaaaatgtgaaccttcagcaggcttctgcccccctacccactgcaacagagcatgat
gaccttttggtagaaatgaggaacttcatagccttccaggcccgtgttgatggacaggca
agcacgcaagagatactgcaggaatttgaatccaagttatccacctcacagtcttgtgta
tttcgagaactgctgagaaatctctgcacgtttcatcgaggtttgaatggtgaaggtgtt
tggaagctgaagcctgagttctgctga
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