Phascolarctos cinereus (koala): 110215574
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Entry
110215574 CDS
T05867
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110215574 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110215574 (SPATA13)
Membrane trafficking [BR:
pcw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110215574 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
110215574
NCBI-ProteinID:
XP_020852822
UniProt:
A0A6P5L4Y5
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MTTVQNGFGNSPATTCIVMEPAETRTIINSSCQNGVCKSSNNSDSEGQEDKLSPSKLVRL
FSATRKRSSCNAERPRSMILMGNSSTWNALSSFRKMGSFKKLKSSVLQGIQGREDPDVLN
EDASENDLGKPIPNGSVTGVQTNRYSYGGQLNDFHKAVDGGVSDCSDPEENDDVFLRNTH
RSRSIRRAYGVGRINLLDSDKHPGPQHCARPLSPIMQEPQICEILVKNSENNRIIYRRSK
STDNLNFLRKSSFKRKSTSNLTDLKMTNEKHEIQRTLSSPTSSDKTSGLDRRSKRWKSPI
RAKDFDRVLKLVSNVADAAWKRETPKSGAPIPSEPNQRIQLNSQLHDDYSRRVSTNTEQD
QKRCTSPVCNVESSFTVIPSLSSTISQGTDTEIETKVFPLKAKTPQESGGVHQSADTSSS
SPTALKAFIKDSDKPKNASQFTCELEHPSTPPWPTAPKPQSPVSENAKYHINFRCPNTHS
TLSLSSMESEERAEVPALKGRSPVSFQESVKTVYYDDGNEDSGISSHSQLSLNLATSPEE
RKEEVVTDEQWRKSSSQDEEKAEPPRVTRRRWGSGKRSRPRPLSDYSHLTSRSFSIPEDS
IAMETQQLDCVDGGNQQSLASSDTSDQNVSSGYPRGCRKRRPISVIGGVSFYGNNQTEEI
ENLLTHPVARPPVPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRQQMRASNISTEGT
TESSALVDDNGSEEDYSYEELCQASSRYLQPGGEQLAINELISDGNVVCAEALWDHVTMD
DQELGFKAGDVIQVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEISENSSSTQGEER
DSEAGKHRQKHSENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQL
GTIFGNIEEIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGAC
LELSNLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHS
DYNNIKAAYETMKNVACLINERKRKLESIDKIARWQVSIVGWEGLNILDRSSELIHSGEL
TRITKQGKSQQRTFFLFDHQLVFCKKDLLRRDMLYYKGRIDMDEMELMDIEDGRDKDYNI
NVKNAFKIINKSTEEVYLFCAKKQEDKGRWMQACADERRRVQEDKEMGMEISESQKKLAM
LNAQKPGHGKSKGYNGCAVPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFWH
TFNKLTPFKK
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtgcaaaatggctttgggaatagccctgctaccacctgtatagttatggaa
ccagctgagaccagaacaatcattaattcttcttgtcagaatggggtatgcaagagcagt
aataacagtgattcagaaggccaagaagacaaactcagcccttccaaactcgtgcgtctt
ttctcagccactaggaagaggagtagctgcaatgcagaaaggccccgctcaatgattcta
atgggcaattcctccacctggaatgctctgtcttccttcaggaaaatgggatcatttaaa
aaactgaagtcctcagttcttcaaggaattcagggtcgggaggacccagatgtcttgaat
gaggatgcttctgaaaatgacttgggaaaacccattcccaatggttctgtgacaggagtc
caaactaacaggtattcttatggaggacaattgaatgatttccacaaggcagtggatggg
ggggtatcagattgctctgacccagaagaaaatgatgatgtcttcctgaggaatactcac
aggtcaaggagcatcaggagagcctatggcgtcggccgcattaacttattggactctgat
aagcatcctggcccccagcactgtgccaggcctctgtcacccatcatgcaggagccccaa
atctgtgaaattctagtgaaaaactctgaaaataaccgtattatctataggagaagcaag
agtaccgataacttgaacttcctgaggaaaagttcttttaagcggaagtccacctcaaac
ctcactgatctgaaaatgacaaatgagaaacatgaaattcaaaggacgctaagttctccc
accagctctgataaaaccagtgggttggacaggaggtcaaaacgctggaagagtccgata
agagccaaggattttgatcgagttttgaaacttgtaagtaatgttgccgatgctgcttgg
aagagagagactcctaagagtggggcgccaatcccgagcgagccaaaccaaagaatacag
ctcaacagccaactacacgacgattactcccgccgtgtttctaccaatacagagcaggac
cagaagaggtgcacatccccagtgtgcaatgtagagtcttcctttacagtaatccctagc
ctcagttcaaccatttctcagggcactgatacagaaattgaaacaaaggtgtttcctctc
aaagccaaaaccccccaggaatcaggaggtgtccatcagtctgctgacacttcctcatcg
agccccactgccctgaaagcatttatcaaagactctgataaaccaaaaaatgccagtcag
tttacatgtgaattggagcaccctagcacaccgccttggcccaccgcccccaaacctcag
agccctgtttcagaaaatgccaagtaccacattaatttccgttgtccaaacactcatagc
acattgtctctgagctcaatggaaagtgaagagagagcagaagtgcctgccctgaagggg
aggagcccagtgtccttccaggagtcagtgaaaacagtgtattatgatgatggtaatgaa
gacagtggcatcagcagccactcacagctgagcctcaatttagccactagtccagaggag
aggaaggaagaggttgttactgatgaacagtggaggaagtcttcctcccaggatgaagaa
aaggccgagccgcctcgagtcacaaggaggagatggggttctggaaaaagatcccgacct
aggcccctctccgattatagtcacttgacaagcagaagcttctccattcctgaagactcc
attgccatggaaacccagcaactggactgtgtggatggaggaaaccaacagagtctggcc
tcctctgacacttctgaccaaaatgtttcttcgggttacccaaggggatgccgaaaaaga
agacccatctctgtgataggcggggtcagcttctatgggaacaaccagaccgaagaaata
gaaaatcttctgacccacccagtagcgagacccccagttccagctcatcaagtgccacca
tataaagctgtttctgcccggttccgtccattcacattttcccaaagcacacccattggg
ttggacagagttggacgcagacagcagatgagagcatctaatatttccacagaaggaact
acagagtcgtctgccttagttgatgacaatggaagtgaggaagattacagttatgaagaa
ctctgtcaagccagttccagatacttacagcccgggggagaacagctagccatcaatgag
ctaatcagcgatggcaacgtggtctgtgcagaagctctgtgggatcatgtgaccatggat
gatcaggagcttggcttcaaagctggagatgtcatccaagtactggaggcctctaataaa
gactggtggtggggcaggaatgaggacaaggaagcctggtttcctgctagctttgtcagg
ttacgagtcaatcaggaagaaatctcagagaattccagcagcactcaaggtgaagagcga
gattcagaagctgggaagcaccgccagaaacattcagaaaacaaagaccagatgaggacc
aatgtcatacaagagatcatgaacactgaacgagtctatatcaagcatctcaaagacatc
tgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcactgttgcccagttg
ggtaccatttttggaaacattgaagagatttataaattccaaaggaagttcttgaaagat
cttgagaagcaatacaataaagaagaacctcatctgagtgaaataggatcctgctttctt
caacatcaagaaggctttgccatctattctgaatactgtaacaaccatcctggggcctgc
ctggagctttcgaacctgatgaagcagggcaagtacaggcacttctttgaagcctgccgc
ctgcttcagcagatgattgacatagccatcgatggatttctcctgactcccgttcagaag
atttgcaaataccctctgcagctagctgagttactgaagtacaccactcaagagcacagc
gattacaacaatataaaggcagcatatgagactatgaagaatgtagcatgcttaatcaac
gagcgcaaacgcaagttagagagcatagacaagatagcacgctggcaagtgtccattgtg
ggctgggaggggctcaatattttagaccgcagttcagaactgatccattcaggagaactg
actagaatcacaaaacaaggaaaaagccagcagaggactttcttcctctttgaccaccag
cttgtgttctgcaagaaggacctgctcaggcgtgacatgttatactacaaaggccgaatt
gacatggatgagatggagctgatggacatagaggatgggcgggacaaggactataatatc
aatgtaaagaacgccttcaaaatcatcaataaatcgacagaagaggtgtatttgttttgt
gccaaaaagcaagaggataaaggcaggtggatgcaagcgtgtgctgatgagcggagacgg
gtgcaagaagacaaagagatgggaatggaaatatcagaatctcaaaagaaacttgctatg
ttaaacgctcaaaaaccaggccatggaaagtcaaaaggttataatgggtgtgctgtgcct
cccccccatcaaagcttacatcctattcaccaacgccatatcacagtgcctaccagcatt
cctcaacaacaagtttttgccctggcagaacctaagagaaagccatctctgttttggcat
accttcaataaactcaccccattcaagaaatga
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