Phascolarctos cinereus (koala): 110216363
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Entry
110216363 CDS
T05867
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110216363 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110216363 (JMJD1C)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110216363 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
110216363
NCBI-ProteinID:
XP_020853832
UniProt:
A0A6P5L7F5
LinkDB
All DBs
Position
Unknown
AA seq
2317 aa
AA seq
DB search
MIVRNDQVLEPQNVDPSMVQMTFLDGVLHPLLKGEDIGISSHRRSWSAQSSTAVDDHSIR
AQASSPTPTMNSQATGTTQNLFLQQPGSPRLNRRRGSDSSADEEKREEKCGCLGHGENHK
SKNKHFHNKRRKTEDDEKNLNAKRPRTDNVSDYSECSDSETSSKRMTDPPYNPNAGNEAS
RNDSNINGDEGMSQRSEGAEQPAASSQSLWGQVQEGKKPEEAEHLVPAGFELQGNPLLGT
AEKMMFYDASVSDLHIQEHQPENAPAVEMLPQEQFATTPPTPKGVIDVTNETGSEKAAQE
NPARIFGFPPLQKMEAHSSDAKLLFSTPQYVETRKPEPEQSWASSMANKMDLAAPSLKNP
FAVSERLIIEKEKDAFSTYRTPGNAAEDHKLNKPNPPPPEAPKPKVPPSGDHVKPKASSI
FDVIQAKFPRNTDVAKPKASFASGGRPAAERRLTNKTQLDLPRPSFHPPSTRGSASESTK
NPLMDKNDHFTAYRDPALAGQESGGASHVSSFLSQHTFPHSSHKTCHNPSGHQPSLSTPT
HLLPGSSNHNQLPSLSHSVNSSAPSPLLPTVLPGVPQASLVGGPPRAEAAHSSSLSHLSI
APQQQQQLLQHASPHHLGQAHPPASYNQLGLYPVVWQYPNGPPSYPALSSMSTPKWLPQD
NAANAEASLRGNTPNPWLHQPTPVTSADGLGLPSHIPVRPSSADPHRPLNMTGHSGPSLS
KALVDHHPKEELERKAFIDPLRTVVSTSVKSDLDLIPAVKESQLPRPFVDQMMSQFQRPI
QDTGDRMSKYNEESRRVLQESIDDVTPFADKMTLDGDGESYSRSTPLSSASAKSQTTKQD
KDGDRSVSELFGVKPSAPQSNYFTTISSTVVNEPPRFPPKEVSALFTDKQNNNPSTVANP
QVLTSCMSSLSKPPPLIKHQPEGEGLGSKLAEQLPQQMPSHSVTAFGNDCRSPNHLAVSS
SNPIRSMPALHRAPVFHPPIHPSPDRKESTYSSLSPPTLTPVMPVNAGGKVQELQKPPTL
LPELKDAQATFKNASEQNLSEMWRSPSAPGNEKATWHAEKSSGKAPAATASVIVCPPSSG
KYESVPAMQPAPRERGSERSSIGANPADIWKPVEAQEVGRVILPNSNLTLPPTHYEKQLE
ATPKGRTASSIIKPATPGLICGTKQNITPAAAATTSDSSWSCADVIYSLANTVLTPTSSP
STSRSVVQPTAHVQECRVSTIISNTAVSSKTGREAPPSSEFSNAADFIHLKKHKAALAAA
QFKGGNANEAEPSAGSSQTYPASARPESPATCSSANKAQAVGSGQNSQTSQPNYHTKLKK
AWLTRHSEEDKNSNRVENSGNTVSEIIKPCSVNLMASTSGEMQSSGESPVLEDKPARDDR
AGKRKMKRHYESVSDSEDSDESKAEQRAKRQPKPTYKKKQNDLQKRKGELEEEARPNGAL
IRSSRDKSKLKLPSSSSNAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRE
CRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTYENYD
DDELDLETSKYILSIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATL
FNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPASVL
TDLLDAMHNLREKFDIKSNCLCSDKQNVQVETIPEVNGGSSQVLQNVLDHNNTISLCMPE
SQQQNSPLKSETNGNTSPRSDTSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPL
EKPMKEESDQDNSDSPDRKTPPAASQSNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVY
STGAPSGKSGRTVPNILDDIIASVVENKIPPNKASTMDDDDDDDDDDDEEEEEEEEEGEE
PAAVDERDRVSRDVPHTWMCEKRVLWLQDHKNLDNWKLFKQCWKQGQPVVVSGVHKKMNI
SLWKAEAISLDFGDHQADLLNCKDSLISNANVKEFWDGFEDISKRQKMKNGETVVLKLKD
CPSGEDFKTMMPARYEDLFKSLPLPEYCNPDGRFNLASHLPGFFVRPDLGPRLCSAYGVA
ATKDHDIGTTNLHIEVSDVVNILVYVGVAKGNGVLSKSGVLKKFEEEDLDDLLRRRLKDF
TENPGALWHIYAGKDADKIREFLQKIAKEQGLEVPPEHDPIRDQSWYLNKRLRQRLLEEY
GVKTCTVVQFLGDAIILPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEE
INYDDKLQVKNILYHAVKEVVRALKMREEEMEDMEEN
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgattgttaggaatgaccaggtactagaaccacagaatgtcgatccttctatggttcaa
atgacctttcttgatggtgttcttcaccctttgttgaaaggagaagacattggcatctcc
tcacaccgtagatcttggtctgctcaaagtagcaccgccgttgacgatcattctatacgt
gctcaagccagtagcccaacaccaactatgaactcccaggctacagggaccacacagaat
ctattcctgcagcagcctggaagtcctcgactcaacaggaggaggggctcagatagtagt
gcagatgaagagaagagagaagagaaatgtggttgcctaggccatggagaaaatcataaa
agcaaaaataaacactttcataacaaaagaagaaaaactgaagatgacgaaaagaatcta
aacgcaaaaagacctcgaacagacaatgtttccgactattctgagtgcagcgactcagaa
acttcaagtaaaaggatgacagacccgccttataatccaaatgcgggaaatgaggcgagc
agaaacgattcaaatatcaatggagatgaaggaatgtcccagcgcagtgagggagcagag
caaccagcagcaagtagccagtctctttggggtcaagtccaagaaggtaagaaaccggaa
gaggcagaacacctcgtgccagccggctttgagctgcaaggaaaccctcttctgggcacc
gcagaaaagatgatgttttatgacgcgagcgtcagcgacctgcatattcaggagcaccaa
ccagagaacgcacctgctgtggagatgttaccccaggagcaattcgcgaccacaccacct
accccgaaaggtgtgatcgacgttacaaatgagaccgggtcagaaaaggcggctcaggaa
aaccccgcaaggatctttggttttccgccgcttcagaaaatggaggctcacagcagtgac
gcaaaacttttgttttccactccacaatatgtagaaacaagaaaaccggaacctgaacaa
agctgggctagcagcatggcaaacaaaatggatttggcagctcctagtcttaagaaccct
tttgccgtaagtgagcgtctgattattgaaaaagaaaaagatgcgttttcaacgtatcgc
actccaggaaatgcagctgaagaccacaaactgaataaaccgaatccaccgcctcctgag
gccccgaagcccaaagtccctccttcgggagatcacgtcaaaccaaaagccagttccata
tttgacgtcattcaagccaagttccctcgtaacaccgatgtggcgaaacctaaggccagc
ttcgccagcggtggccgacccgctgcagagagaaggttgacaaataaaacacaacttgac
ttgccgagaccgagctttcatcccccttccactcgtggcagtgcatcagaaagcaccaag
aaccctcttatggataaaaatgaccatttcacagcttacagagatcctgccctcgctggg
caagagtcaggaggagcaagtcacgtttcatcattcttaagccagcacactttccctcat
tcgtcccacaaaacttgtcacaatccaagtggtcatcaaccttctttaagtacccctacc
cacttgttacctggctcttcaaaccataaccagttgccttctcttagtcattctgtgaac
agttccgccccctctcctttgcttccgacagtgttacctggagtgcctcaggcctcctta
gtaggtggccccccacgagcagaggctgctcactccagcagcttgagccacttatcaata
gcgccacagcagcagcagcagctgctgcagcatgcatcacctcatcacctcggacaagca
catccacctgcttcctataatcagctcggactctacccagttgtttggcagtatcctaat
gggcccccttcctacccggcactgagcagcatgtccactcctaaatggctcccacaggac
aatgcagcgaatgctgaagcctccttgcgggggaatactcccaatccttggttacatcag
cctacccctgtgacctctgctgacggtcttgggttaccaagtcacattcctgtcaggcca
tccagtgcagatcctcatcggccccttaacatgacaggtcattctggcccatcgttgtca
aaagcgttagtagatcatcatcccaaagaagaattggagaggaaagcttttattgaccct
ctcaggactgttgtttccacttcagtcaagagtgatttggatctgatcccagctgtaaaa
gagagtcagttaccgagaccttttgtggatcaaatgatgagtcagttccagaggccaatt
caggatactggagacaggatgagcaagtacaatgaggaaagccgaagggtcctccaagaa
agcatcgatgacgtcactcccttcgcggacaagatgactctggatggagacggagagagc
tattccagaagcactcctttgtcctctgccagcgcaaaaagtcaaaccaccaaacaagac
aaagacggggaccgctctgtgtcagaactgtttggtgtgaagccctctgcacctcagagt
aactacttcaccaccatatccagcactgttgtcaatgaacctccgcggttcccacccaaa
gaagtctctgctctgttcactgataagcagaataacaacccctcaacagtagccaatcct
caagtcctgacttcatgtatgtcatcactttcaaagcccccacctctgattaaacaccaa
ccagaaggtgaaggcttgggaagcaagctagcggaacagcttccccagcaaatgccgtct
cactccgtaactgcttttggaaatgactgtcggagtcctaaccatttggcggtttcttcc
tcgaatccaatccggagtatgcctgcattacatagagcaccagtttttcatccaccaatc
catcccagtccagatagaaaggaaagcacctatagcagcctttcccctcccaccttaact
ccagttatgccagtaaatgctggggggaaagtccaggaattacagaaacctccaactcta
ctacctgagctaaaagacgctcaggcaactttcaagaatgcttctgaacaaaatttgtct
gaaatgtggagatctcctagtgcccctggcaatgagaaagcgacctggcatgcagagaaa
agcagcggaaaggcaccggctgccacagcatctgtcatcgtgtgtcccccttcgagtgga
aagtacgagagcgtgccagcaatgcagccggctcccagggagcgagggagtgagagatct
tcaattggggcaaatccagccgatatctggaaaccagtggaagcccaagaggttgggaga
gttattcttcccaattcaaacttgacccttcctccaacccactatgagaagcagcttgag
gccacccccaagggccgcactgccagctccatcatcaagcctgcaactcctggtttgatc
tgtggcaccaaacagaacataacaccggccgctgccgccaccaccagtgactccagctgg
agctgtgcagatgtgatatattcgctggcaaatacagttttgacacccacatcctcaccg
tctacttcgagaagtgtcgtccagccgacagcccacgtacaggaatgcagagtcagcacc
ataatttcaaacaccgcagtcagtagcaagacaggcagggaggccccgcccagctccgag
ttctccaacgcggccgattttatccacttaaaaaaacataaggctgcgttggccgcagct
cagtttaaaggtggtaatgccaacgaggctgagccgagtgccggaagcagccaaacgtat
ccagcttccgctcgccctgaaagtcctgccacctgcagttcggcaaacaaggcacaagct
gtaggcagcgggcagaactcccagaccagtcagcccaattaccacaccaagctgaaaaag
gcctggctcaccagacattccgaggaagataaaaacagcaacagggtggagaattcagga
aacaccgtctcagagatcattaagccgtgctcggtcaatttaatggcctccacatcgggt
gagatgcagagcagtggggagagtccggtcctggaagataaacccgccagagacgataga
gccggcaaaaggaagatgaaaaggcattacgagtctgtctctgacagtgaagactccgac
gagagcaaggctgagcagagggccaagcgccagcccaagccaacatacaagaagaagcag
aacgatctgcagaagagaaagggggagctcgaggaggaagccaggcctaacggggctctc
atccggagctctcgagacaagagcaagctcaagctgccaagcagcagctccaatgccggc
atccctcgttcagtattgaaagactggcgtaaagtgaagaagctgaagcagactggcgag
tcctttctgcaggacgactcctgctgtgagataggccccaacttgcagaagtgcagagag
tgcagactgatccgaagtaagaagggggaagagccaacacactcgccagtgttctgtaga
ttttactacttccggcgattgtcattcagtaaaaacggagtggtcagaatagatggcttc
tcatctcctgaccagtatgacgatgaagctctgagcttatggacatatgagaattacgat
gatgatgaactagacttagagacttccaaatacatcttgagtatcataggtgacaagttt
tgtcagttagtgacatcagagaaaacagcgctgtcctgggtgaaaaaagatgccaaaatt
gcctggaaaagagcagtgagaggcgtccgtgagatgtgtgatgcgtgtgaagccacattg
tttaatattcattgggtctgccaaaaatgtggatttgtggtctgcttagattgttataaa
gcaaaagaaaggaagagttcaagagataaagagctctatgcttggatgaaatgtgtcaag
ggacaacctcatgaccacaaacacttgatgccaactcagatcataccagcttctgttttg
acagatcttctagatgcgatgcacaatcttagagaaaaattcgatattaaatctaattgc
ctttgttccgacaagcaaaatgtacaagttgagacaattcctgaagtgaatggtggatcg
tctcaggttttgcagaatgttcttgatcacaataacacaatttctctgtgcatgcctgag
tctcagcagcagaattcccctctgaagtctgagactaatggtaataccagccccagaagt
gacacaagcacagacagcaagttaactcctccagaatcccagtccccgctacactggtta
gcagatcttgctgaacaaaaggccagagaagaaaagaaagaaaacaaggaatgtcccctt
gaaaaacctatgaaagaagaaagtgatcaagataactctgattctccagaccgcaaaact
ccccctgctgcatcccagagcaatgaacaaggatccaccttgcgggacttgctgaccaca
acggcaggcaagctgcgtctcggctctacggatgcaggcatcgcctttgcgccggtatat
tctacaggagccccaagtggcaaaagtggaaggactgtgccaaacattcttgatgacatc
attgcttcagttgttgaaaacaagattccaccaaataaagcctccacgatggatgatgat
gatgatgatgatgatgatgatgatgaagaagaagaagaagaagaagaagaaggagaagaa
ccagctgctgtggacgagcgtgatcgagtgtccagggatgtgccacacacatggatgtgt
gagaaacgcgtcttgtggcttcaagatcacaagaatcttgataattggaagcttttcaag
cagtgctggaaacaaggacagcctgtggtggtttctggtgtccacaagaaaatgaacatc
agcctgtggaaagcagaggcaattagtcttgattttggagaccaccaggcagatctcctg
aactgcaaagacagccttatttcaaatgccaacgttaaggagttctgggatggttttgaa
gacatttcaaaacgtcaaaaaatgaaaaatggagaaaccgttgttttaaaactgaaagac
tgcccttcaggagaagacttcaaaactatgatgccggcaagatatgaagatctgtttaaa
agcctgccgttaccagaatactgtaatcctgatggaagattcaatttggcctcccatttg
ccaggattttttgttcgtccagacctaggacccagactgtgcagtgcatatggtgtggct
gccactaaagatcacgatattggaacaacaaatctccacattgaagtttctgatgttgta
aacattctggtttatgttggtgtagcaaaaggaaatggagtgctctcaaaatcaggtgta
ctaaagaaatttgaggaagaagacctggacgaccttttaaggagaaggctgaaagacttc
accgaaaacccaggtgctctgtggcacatctacgcgggcaaagatgcggacaagatcagg
gagtttctccagaagattgcaaaagaacaaggccttgaagtcccaccagagcatgacccc
atccgcgaccagagctggtacctgaacaaaagactccgccagcgactgctggaagagtat
ggtgtgaaaacgtgcacggtcgtccagtttctgggggatgcgatcatcttgccggctggt
gcactgcaccaggtgcagaattttcacagctgcatccaggtgactgaagactttgtgtcc
ccagaacatcttgttcaatcatttcacttaacacaagaactgagactgctgaaggaggaa
atcaactatgatgacaagctgcaggtcaaaaacatcttataccatgcagttaaagaagtg
gtgagagctctgaagatgcgtgaggaggaaatggaagacatggaggaaaattga
DBGET
integrated database retrieval system
