KEGG   Phascolarctos cinereus (koala): 110216694
Entry
110216694         CDS       T05867                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03013  Nucleocytoplasmic transport
pcw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110216694
  09122 Translation
   03013 Nucleocytoplasmic transport
    110216694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110216694
   03041 Spliceosome [BR:pcw03041]
    110216694
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110216694
Spliceosome [BR:pcw03041]
 Complex C
  Other components
   EJC/TREX
    110216694
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110216694
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EML eIF2A DSE1_N Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 RMC1_N NBCH_WD40 WDR90_beta-prop_4th Tricorn_2nd Beta-prop_EIPR1 TRM82_WD B-prop_COPA_B_2nd Beta-prop_ACSF4 PAC11 Beta-prop_NUP159_NUP214 PD40 Beta-prop_WDR75_1st Beta-prop_SPT8 ASA1 Beta-prop_WDR41 Beta-prop_Nup120_160 Peptidase_S9_N Beta-prop_NWD2_C Cytochrom_D1 Beta-prop_WDR11_1st DPPIV_N TP_0598_N Beta-prop_ELP1_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 110216694
NCBI-ProteinID: XP_020854243
UniProt: A0A6P5L882
LinkDB
Position
Unknown
AA seq 351 aa
MASASTLAGSSALGLGAVGGPGPWGSSAGSPSRYVAGMQELFRSHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcgagcgcctcgaccctggcggggagctctgcgctggggctgggcgctgttgggggg
cccgggccgtggggtagctcggctgggagcccgtcccgctatgtggccgggatgcaggag
ctgtttcggagccacagcaagactcgcgagttcccggcgcacagcgccaaggtgcactcg
gtggcctggagctgtgacgggcgccgcctggcttcgggctccttcgacaagacggccagc
gtcttcttgctggagaaggaccggctggtaaaagaaaataactaccgagggcatggggac
agcgtggatcagctttgttggcatccgagtaatccagacctctttgttactgcatctggg
gacaaaactattcgcatctgggatgttagaactacaaaatgcatcgccactgtgaacact
aaaggggagaatattaacatctgctggagtcctgatgggcagaccattgctgtgggcaat
aaagatgatgtggtgactttcattgatgctaaaacccaccgttcaaaagcagaggagcaa
tttaaatttgaagtaaatgaaatctcctggaataatgataataatatgttcttcctgaca
aatggcaatggttgtatcaacattctcagctatcctgagctgaagcctgtgcagtccatc
aatgcccatccctccaattgcatctgtatcaaatttgaccccatggggaagtactttgcc
acaggaagtgctgatgcactggttagcctttgggatgttgatgaattagtgtgtgtgaga
tgtttttccagattggattggccagtaagaaccctcagctttagccatgatgggaagatg
ctcgcatcagcatctgaagatcactttattgacattgctgaagtagagacaggtgataag
ctctgggaggtgcagtgtgagtccccaacattcacggtggcctggcatccgaaaagacct
cttttggcatttgcttgtgatgacaaagatggcaaatatgacagcagccgggaagcaggg
actgtgaagttatttgggcttcctaatgactcttaa

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