Phascolarctos cinereus (koala): 110216909
Help
Entry
110216909 CDS
T05867
Symbol
DCAF1
Name
(RefSeq) LOW QUALITY PROTEIN: protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110216909 (DCAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcw01001
]
110216909 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110216909 (DCAF1)
Enzymes [BR:
pcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110216909 (DCAF1)
Protein kinases [BR:
pcw01001
]
Serine/threonine kinases: Other
Other
110216909 (DCAF1)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110216909 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110216909
NCBI-ProteinID:
XP_020854618
UniProt:
A0A6P5L991
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MTSGSVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVHEMTLRQENKRPSPRKLSSEPLLPLDEEAVDMDYGEMTMDGEQEETSGDMEISFHL
DSGHKTSSRVNSTTKLEDGGLKKSKMAKQGDRDGFRKAKQKLGFSTSEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTSAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQPPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
SFPEKELLLLIRNHLISKGLGETATVLTREADLPMTAASHSSAFTPVTAAASPVSLPRTP
RIANGIAARLSSHASVASSASSVHSQSRPPQGPLALPGPSYAGSSPLIGRISFIRERPSP
CNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATC
PPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVF
REANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRD
GSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAHIYDIQ
TGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVF
HPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLMEERM
KSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRL
YEVGRQRLAEDEDEEEDQKRMEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGDNDFSPSDEELANLLEEGDEGEDEDSDADEEVELILGDMLHCPSVAKLMNFGE
ITPMISSGFSYI
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatcagtgcacgtggactcaaaagctgagctcactactttattagagcag
tgggagaaggaacatggcagcgggcaagatatggtccctatcctcaccaggatgtcagag
ttgattgagaaagaaactgaagaatatcgtaaaggagatccagatccatttgatgataga
catcctggtcgagctgatccagaatgtatgttgggccacctattgagaatactgttcaag
aatgatgatttcatgaatgcattggtgaatgcatatgtgatgacaagcagagagcctcct
ttgaacaccgctgcttgcagactcttgttagatatcatgcctgggctggaaactgctgtt
gtatttcaagaaaaggaaggaattgttgagaacctgttcaaatgggcaagagaggctgat
caaccactgaggacttattctactggactgttgggaggtgctatggaaaaccaagatatt
gctgccaactatagggatgagaactcacagctggtggctttagtgctccggcgacttagg
gagctgcaggtgcatgaaatgactttacggcaggaaaataaacgtcccagccctcgaaag
ttgtcctcggaaccgctgttgccactggatgaggaagcggtagacatggactatggggaa
atgacaatggatggagaacaggaggagacctctggggatatggagatttcctttcacctt
gattcaggccataagaccagtagcagagtgaattcaaccaccaaacttgaggatggaggg
ttgaaaaaaagtaaaatggcaaaacagggtgacagagatggcttcagaaaagccaaacaa
aagttgggcttctccacctctgagccagaacgcatgtttgttgagctctctaacagcagc
tggtcagaaatgtccccttgggttattggtactaattataccctttatcctttgacttct
gctatagagcaacgacttattcttcagtacttgactccactaggagagtatcaggagctg
cttcccattttcatgcagcttggatcaagggagctgatgatgttctatattgacttaaaa
aggacaaatgatgtgttactcacctttgaggccctgaagcacttggcatcacttctgctc
cacaacaagtttgccacagagtttgttgcacatggaggtgtacaaaagttactggaaatt
cctcgtccttctatggctgctactggggtatccatgtgcttatattatctgtcttataac
caggatgccatggaacgagtgtgcatgcatccccacaatgttctatccgatgtagtgaac
tataccttgtggctaatggaatgttcccatgcatctggatgctgccatgctaccatgttt
ttctctatttgcttctcttttcgtgctgtcttggaactctttgacaggcatgatggcctt
cgtcgcctggtcaacttgatcagtaccctagaaattctaaacttggaagatcagggtgct
cttctgagtgatgatgaaatatttgccagccgacaaactggaaaacatacctgcatggcg
ctccgaaggtattttgaagctcacctggccattaagttggaacaggtgaagcagtcactt
cagagaacagaaggtggtattcttgtccatccacagccaccatacaaggcatgttcttat
actcatgagcagattgtggagatgatggagtttctcatagagtatggaccagctcagtta
tactgggaaccagctgaagtcttcctcaaactttcttgtgtgcaacttatgttgcagctt
atatccattgcctgcaactggaaaacctactatgcaaggaatgataccgtacgctatgct
ttagatgtcctggctattcttactgtggtaccaaaaatccagctgcagttagctgaatca
gtagatgtgttagatgaagctggatccactgtctctactgtaggtatcagcatcatcctg
ggagtggcagagggtgagttctttattcatgatgctgaaattcagaaatcagctcttcag
atcattatcaattgtgtatgtggcccagataaccggatctctagtattggcaagttcatc
tctggaacccccaggcggaagttgcctcagcctccaaaaagcagtgagcatacgctggcc
aagatgtggaatgtggtccagtccaacaatggtatcaaggtgctcttgtcattgctgtcc
atcaagatgcccatcactgatgcagaccagatcagagcgctagcgtgcaaagccctagta
ggactttctcgcagtagcactgtccggcagatcatcagcaagctgcctctcttcagtagc
tgccagatacagcagctgatgaaggaacctgttttgcaggacaaacgcagtgaccatgtc
aagttctgcaaatatgctgctgagctaattgaacgtgtgtcaggaaagcccctccttatt
ggtactgatgtttctcttgcacggctgcagaaagcagatgtggtagcccagtctagaatc
tcctttcctgagaaggaattgcttctcttaatccgaaaccatctcatctccaaagggctg
ggagagacagcaactgtcctcaccagagaggctgatctacccatgactgctgcctctcat
tcctctgccttcactcctgtcacagctgctgcttcccctgtctctctgcctcgtacccct
cgcattgccaatggcattgcagccagactaagcagccatgccagtgtagcttcctcagcc
tcatctgtccactctcagtcacggcctccacagggtccacttgccttgcctggcccatct
tatgcaggcagctcccctttgattggcaggatcagttttatcagggagaggccatcaccc
tgcaatggcaggaaaatcagagtgttaaggcagaaatcggaccatggcgcctacagccaa
agcccagccataaaaaagcagttggacagacatcttccttcccctcccacgttggacagt
atcatcacagaataccttagggagcagcatgctcgctgcaagaacccagttgccacctgt
ccccccttttctctttttacccctcaccagtgtcctgagccaaaacaaaggcggcaagcg
ccaacaaattttacctcgagactaacccgcagagcagcctttccaaagtacggaggggta
gatggtgggtgctttgataggcacctcatcttcagcaggttccgtcccatttcagtgttt
cgggaagcaaatgaggatgaaagtggctttacctgctgtgcattctcagcccgagagagg
tttctgatgcttggcacgtgtacggggcagctgaaactttacaatgtattcagtgggcag
gaagaggctagttataactgtcataactctgccatcacacaccttgaaccgtctcgggat
ggatctttgttgttaacgtctgccacttggagccagcccctttctgcactctgggggatg
aaatcagtgtttgatatgaagcattccttcacagaagaccactacgtagagttcagcaag
cactcacaggatagggtcattggcacaaaaggggacattgcccatatttatgacattcag
actggcaacaagctgttgactctctttaacccagatcttgccaacaactacaagaggaac
tgtgccacgtttaatcctacagatgatctagtcttaaatgacggggtcctctgggatgtc
cgctctgcacaggccatacataagtttgacaagttcaacatgaacatcagcggtgttttc
catcctaacggactagaagtcataattaatactgaaatttgggacctgcggactttccat
ctgctgcacacagtcccagctttggatcagtgtcgtgtagttttcaactatactggtaca
gtgatgtatggagctatgctacaggctgatgatgaagatgacttaatggaagagaggatg
aaaagcccctttgggtcatctttcagaacatttaatgcaacagactataagcctatagct
accattgatgtgaaacggaatatttttgacctgtgcactgacactaaggactgttacctt
gctgttattgagaatcaaggcagtatggatgccctgaacatggacacagtatgcaggttg
tatgaggtgggcaggcagcgcctggcagaagatgaggatgaggaagaggatcagaagcgg
atggaggaagaagaacaggaggaagaagatgatgatgaagatgatgatgacacagatgac
cttgatgaacttgacactgatcagctgctggaggcagagttggaggaggatgaaaacaat
gagaacgctggcgaggatggtgataatgacttctctccttcagatgaagagctggctaac
ttgcttgaagaaggagatgaaggggaagatgaagactctgatgctgatgaggaagttgaa
ttgatactgggagacatgcttcactgcccatctgtggccaaactcatgaattttggggaa
ataacccctatgatctccagcgggttttcttatatatag
DBGET
integrated database retrieval system
