Phascolarctos cinereus (koala): 110217375
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Entry
110217375 CDS
T05867
Symbol
UPF2
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110217375 (UPF2)
03015 mRNA surveillance pathway
110217375 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110217375 (UPF2)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110217375 (UPF2)
mRNA cycle factors
P-body specific factors
110217375 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110217375
NCBI-ProteinID:
XP_020855425
UniProt:
A0A6P5LAX5
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MEIVLDNIMPAERKKPTSMEEKESLLNNKEKECSERRPVSSREKTKDDVKLTTKRDIVKV
PEDKKKKLEEDKRKKEDKERKKKEEEKVKAEEELKRREEEEKKKLEEEERKKQEEREKRQ
QEEAAAQLKEKEESHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTA
FVKKLKTITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRY
ADFAPSLLQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKN
IINADRESHTHVSVVISFCRHCGDDIAGLIPRKVKGAAEKFNLSFPPSEIISPEKQQPFQ
NLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANS
QSLADLLDENMPDLPQDKPTPEVSLGSGPPSRLSFFHAGQFLFHRPQSLPQVAFRGMELA
LSGFTSMIIFTGKPGDXLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNERTYQSKDSN
KEDSKESKEPKDNKDVSNTDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQEDE
EASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRL
DLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKF
KMFTKNDTLYCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQ
AMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMR
KLPWQDPEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLG
MEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGTPSPLDPPEHL
FRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKNLEVWTKDHPFPIDIDYMI
SDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLLNDKDSKDSMTEGENLEEDEEEE
EGGAETEEQSGNESEVNEPEEEEGSDNDDDDGEEEEEENTDYLTDSNKENETDEENTEVM
IKGGGLKHVPCAEDEDFIQALDKMVLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPL
GGGEGETEAGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLT
LDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGR
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggagattgtcctggataacataatgccagctgagcgtaaaaagccaacaagtatggaa
gaaaaagaatctctattaaataacaaagaaaaggagtgcagtgaaaggagaccagtaagt
agcagggaaaaaacaaaagatgatgtcaaacttaccaccaagagagacatagttaaagtg
cctgaagataagaagaagaaattggaggaagacaaacgaaaaaaagaggacaaggaaagg
aagaaaaaagaggaagagaaggtgaaagctgaggaagaattaaagaggcgagaagaggaa
gaaaagaagaagcttgaagaggaagagagaaagaagcaagaagagcgggagaaacgtcag
caagaagaagcagctgctcaattgaaagagaaagaagaatcccatcagcttcatcaggaa
gcctgggaacggcatcaagcaaggaaggaactccgaagcaaaaaccaaaatgcaccagac
aaccgaccagaggagaatttctttagcagactggactcaagtttgaagaaaaatacagct
tttgtcaagaaattgaaaactattacagagcaacagagagactccttgtcccatgatttt
aatggcctcaatttaagcaaatacattgcagaagctgttgcttctattgtggaagctaag
ctaaaaatttctgatgtgaactgtgctgtgcacttgtgctctctctttcaccagcgctat
gctgatttcgccccatctctgcttcaggtttggaaaaaacattttgaagcaagaaaagag
gagaaaactcctaacattaccaaactaagaactgacttgcgtttcattgcagaattgacc
atagtcgggattttcactgacaaagaaggtctgtccttaatctatgaacagctgaaaaac
attattaatgctgaccgtgaatcccacactcatgtgtctgtggtgattagcttttgccgg
cattgtggggatgatattgctggattgataccaaggaaagtgaaaggtgctgcagagaag
tttaatttgagttttcctcctagtgaaataatcagcccagagaagcaacagcctttccag
aacctgttaaaagaatactttacgtctttgaccaaacatctgaaaagggaccacagggag
ctacagaatattgagagacaaaacagacgcattctacattctaaaggggagctgagtgaa
gatcgacataagcagtatgaagaatttgctatgtcttatcagaaattactggcaaattct
cagtctttagcagaccttttggatgagaatatgcctgatcttcctcaggacaaaccaaca
ccagaggtttccttagggtctggacctccaagccgtctcagcttcttccatgctgggcag
tttctgtttcatcggcctcagtctctgccccaagtggcttttagagggatggaactggcc
ctgtctggttttacaagcatgattatctttactggtaaacctggagatnngttagaaggt
ggtatatgggaggatgaagatgctcgaaatttttatgagaaccttattgatttgaaggct
tttgttccagccattttatttaaagacaatgaaagaacatatcagagcaaagactctaat
aaagaagattccaaagagtcaaaggaacctaaggataataaagatgtgtcaaatacagat
gatttggaacttgagttggagaacctggaaattaatgatgatactttggaattagagggt
ggtgatgaagcagaagaccttacaaagaaacttcttgatgaacaagaacaagaagatgag
gaagccagtactgggtctcatctaaagcttatagtagatgctttcctgcagcagttgccg
aactgtgtcaatcgagatctcatcgacaaggcagcaatggatttttgcatgaatatgaac
accaaagcaaatagaaggaaattggtacgagcactcttcatagttcctagacaaagattg
gatttattaccattttatgcaagattggttgccacattacatccttgcatgtcagatgtt
gcagaggatctttgttcgatgctgaagggagatttcagatttcatgtacgaaaaaaggac
cagatcaatattgaaacaaagaataaaactgttcgatttattggagagctaacaaagttt
aaaatgttcactaagaatgatacactatattgtctaaagatgcttctgtcagacttttcc
catcaccatattgaaatggcatgtaccctgttggaaacttgtggaaggtttcttttcaga
tctcctgagtctcacctgagaaccagtgttcttttggaacaaatgatgagaaagaaacaa
gcaatgcatcttgatgcgagatatgtcacaatggttgagaatgcatattattattgcaat
ccccctccagcagaaaaaactgtgaagaagaagcgccctcctctccaggaatacatccgt
aagctcctttacaaggacctctccaaggttactactgagaaggtactaagacagatgcga
aagctgccctggcaggatccagaagtgaaagactatgttatttgttgtatgataaacatc
tggaatgtgaaatataatagtattcattgcgtagccaacctcttagcaggattagtgctt
taccaggaagatgttggaattcatgttgtggatggagtattagaagatattcgactagga
atggaggttaaccagcctaagtttaaccagagacggatcagcagtgccaagttcttgggg
gaactttataattaccgaatggtggaatcagccgttatttttagaactctttattctttt
acatcatttggtgttaatcctgatggtactccaagtccactggaccctcctgaacatctc
ttcagaattaggctagtatgcactattctggatacctgtggtcagtactttgacagaggc
tccagcaaacgaaagcttgattgtttcctcgtttattttcagcgatatgtttggtggaag
aaaaatttggaggtttggacaaaggaccatccttttcctattgacatagattatatgatc
agtgatacattagaactgttaagaccaaagatcaaactttgtaattctctggaagagtcc
atcaggcaagtacaagacttggaacgagaattcttaataaaactaggccttttgaatgac
aaagattcgaaagattccatgaccgaaggagagaaccttgaagaagatgaagaggaagaa
gaaggaggagctgagacagaagaacaatctggaaatgaaagtgaagtaaatgaacctgag
gaagaggagggttctgacaatgatgatgatgatggagaggaagaagaggaggagaataca
gattaccttacagattccaataaggaaaatgaaactgatgaagagaacactgaggtaatg
attaaaggaggtggacttaagcatgtcccatgtgcagaggatgaggacttcattcaggct
ctggataaaatggtgctggaaaatcttcagcaacgaagtggcgagtctgttaaagtacac
caactggatgttgctattccactgcacctcaaaagccagctgaggaagggcccaccgctg
ggcggtggggaaggagagactgaagctggcgacacaatgccatttgtcatgttaaccaga
aagggcaacaagcagcagtttaagatccttaatgtaccaatgtcttctcaacttgctgca
aatcattggaaccaacaacaggcagagcaagaggagagaatgagaatgaaaaaactcaca
ctggatatcaacgaacgtcaggaacaagaagattatcaagagatgttgcagtctcttgca
cagcgtccagctccagcaaacaccaatcgtgagcgacggccccgttaccagcatccaaag
ggagcacctaatgcagatctaatctttaagactggtgggaggtaa
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integrated database retrieval system
