Phascolarctos cinereus (koala): 110217507
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Entry
110217507 CDS
T05867
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110217507 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110217507 (APEX1)
Enzymes [BR:
pcw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
110217507 (APEX1)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
110217507 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
110217507
NCBI-ProteinID:
XP_020855604
UniProt:
A0A6P5LFW8
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All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MPKRGKKEVSVKDGISEEPETKEPEPKKTKKGVKEKEAAGEGSATYEDPPDQQTSPSGKR
FTLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPPELQDLPGLTYQYW
SSPSDKEGYSGVGLLSRQCPLNVTFGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGL
VRLEYRQKWDEAFRKFLKGLNAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQG
FGELLQAVPLTDSFRHLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQSLLPALCDSK
IRSKAVGSDHCPITLLLAL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgggggaagaaggaagtatctgtgaaggatgggatcagtgaggagccagag
actaaagagcctgagcctaagaagactaagaagggtgtaaaagaaaaggaggcagcaggg
gaaggatctgccacgtatgaggaccccccagaccagcaaacctcacctagtggcaagcgt
tttacactcaagatatgctcctggaatgtggatgggctcagggcctggatcaagaaaaag
ggtctggattgggtaaaggaagaagcccctgacatactttgccttcaagaaaccaaatgt
tcagagagcaagttgccacctgagcttcaggacctgcctggacttacctaccagtactgg
tcctcacccagtgataaagaaggatacagtggtgttggtctcctttcccgacagtgccca
ctcaacgtcacctttggcattggtgaagaagagcatgatcaggagggccgggtcatagtg
gctgagtttgaggcgtttgtgctggtgacagcatatgtgcctaatgcaggacgggggctg
gttcgactggaatatcgacaaaaatgggatgaagcatttcgcaaatttttgaagggacta
aatgccaaaaagcctcttgtgctctgtggggacctcaatgtggcccatgaagagattgac
ctgcgcaatcccaaggggaacaagaaaaatgctgggtttactccacaggaacgccaaggg
tttggggagctgctccaggcagtgccactgaccgacagtttccgccacctctatccagag
gcagcttatgcttatactttttggacctacatgatgaatgcccgagccaagaatgttggc
tggcggcttgactatttcttgttgtcccagtccttgctccctgccctatgtgatagtaag
attcggtccaaagccgtaggtagtgaccattgtcctatcactctattgctggcactgtaa
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