KEGG   Phascolarctos cinereus (koala): 110217679
Entry
110217679         CDS       T05867                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw04151  PI3K-Akt signaling pathway
pcw04510  Focal adhesion
pcw04512  ECM-receptor interaction
pcw04820  Cytoskeleton in muscle cells
pcw04974  Protein digestion and absorption
pcw05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    110217679 (COL9A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110217679 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110217679 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110217679 (COL9A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    110217679 (COL9A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    110217679 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pcw00535]
    110217679 (COL9A1)
Proteoglycans [BR:pcw00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   110217679 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 110217679
NCBI-ProteinID: XP_020855814
UniProt: A0A6P5LGJ5
LinkDB
Position
Unknown
AA seq 927 aa
MSLSQRQASLVYRKIQFFFFICCFLGPWVSATVQRYRRFPISLTPNPENDLCPPVRIGQD
DLPGFDLISQFQVDKAASRGAIQKVTGSTSLQVAYKLGNNVDFRIPTRNLYPNGLPEEYS
FLTTFRMTGSTVKKNWSIWQIQDSLGKEQVGMKVNGQTQSLSFSYKGVDGSLQTAAFSNT
PILFDSQWHKIMIGVERRSVTLFIDCKKIESLPIKPRGKIDVDGFAVLGKLTDNPQVSVP
FELQWLLIHCDPLRPRRETCHELPVRPSLSNGERGPPGPQGPPGPPGPPGVPGIDGIDGD
RGPKGPPGPPGPSGDPGKPGAPGLPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGF
PGRGIPGPPGPPGASGLPGELGRVGPSGDPGRRGPPGPPGPPGPSGTIGVHDGDPLCPNS
CPPGRSGYPGLPGLRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGIT
GIVGAKGDKGARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGDRGVQGPRGINGLPGPK
GENGLPGVDGRDGIPGMPGSKGEPGKPGPPGDIGRQGLPGLPGTPGAKGVAGEKGNTGTP
GVPGAMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPSGPPGSPGKLGPLGSPGLPGLP
GPPGLPGLKGDRGSVGEPGPKGEQGRVGEEGEAGERGELGDIGLPGPKGSMGNPGEPGLR
GPEGSRGLPGVEGSRGPPGPRGMQGERGATGLPGIQGPAGRAPTDQHIKQVCLRVMQENL
ALMAASLRRPDSGASGLPGRPGPPGPPGPPGENGFPGQIGPRGLPGLKGPPGELGLRGPK
GDLGERGERGPPGRGPKGLPGSIGLPGDPGPASYGKEGRDGERGPPGPAGIPGVPGPPGP
AGPPGFCEPASCTVQAGQRAFSKGPDQ
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgtccctttcccagagacaagcaagcttggtctacaggaaaattcaatttttcttcttc
atatgttgtttcctgggaccttgggtatctgcaactgtccagcgttaccgaaggtttccc
atctccttgactcctaatcctgagaatgacctttgtccaccagtcaggattggccaggat
gatttaccaggatttgacttaatttctcagttccaggtagataaagcagcatctagagga
gctatccagaaggttacaggctcaacatcattacaagtggcttataaattgggaaataat
gtagacttcaggatcccaaccagaaatttgtatcccaatggactaccagaagaatactcc
tttttaacaacttttcggatgactggaagcactgtgaaaaagaactggagcatctggcag
atacaagattccttggggaaagagcaagttggcatgaaggttaatggccaaactcagtct
ctttcattttcttataaaggcgtggatggcagcctccaaactgcagctttttcaaatact
cctattttattcgattctcaatggcataaaattatgattggtgtggaaaggagaagtgtc
accctctttattgactgcaaaaagattgaatccttacccataaagccaaggggcaagatt
gatgtggatggttttgctgttctaggaaagctcacagataatcctcaggtttctgttccg
tttgaactccagtggttgctgattcactgtgaccctctgagacccagaagagaaacttgc
catgaacttccagtccggccaagcctgagcaacggggagagaggtccgccgggtccccaa
gggcctcctgggcctcccggtcccccaggagttccaggcattgatggtattgatggagat
cgaggtccaaagggtcccccaggccccccgggtcccagtggagacccaggaaaaccagga
gctccgggtttacctggcacaccaggagcagatggcttgacaggacctgatggatcgcct
ggctcagttggtccaagaggacaaaaaggagaacctggggtcccaggatcacgtggattt
cctggtcgtggtattcccggaccacctggacctcccggtgcatcaggccttcctggagaa
cttggtcgtgtagggccatcaggtgatcccgggagaagaggaccacctggccctccaggt
cccccaggacctagtgggacaattggggttcatgatggagatccattgtgtcccaattcc
tgtccaccaggtcgttcgggatatccaggtctaccaggcttgaggggtcacaaaggggca
aagggagaaattggggaaccaggaagacaaggtcacaagggagaagaaggtgaccaagga
gaacttggagaagtgggagctcaaggacctccgggtcctcaaggcttgagaggaataacc
ggcatagttggggccaaaggagataaaggagctcgtggccttgatggtgagcctgggcct
cagggtcttcctggtgcacccggtgatcaagggcagagaggaccactaggagaagcaggc
cccaagggtgacagaggtgttcagggtcctagagggataaatggcctcccaggtcccaaa
ggagagaatggcttgccaggggtagatggtcgagatggaatccctggaatgcctggatca
aagggggaacctgggaaacctggtcctcctggtgatataggaaggcaagggcttcctggt
ttacctggaacccctggtgcaaaaggtgttgctggtgaaaagggtaatacaggtactcct
ggggtacctggtgctatgggaaattcaggcaaaccaggtcaacaaggacctccaggggaa
gttggaccacgaggaccccgggggctaccaggtagcagaggagaattaggacccagtggt
cctccaggctcaccaggtaaactgggtcctcttggcagcccaggccttccaggccttccc
ggtccccctggactccctggattgaaaggtgacaggggttcagttggtgagcctggtcca
aagggagaacaaggtcgtgttggtgaagaaggtgaagcaggagaaagaggagaactagga
gatataggattgccaggcccaaagggatctatgggtaaccctggagaacctggtttaaga
ggacctgaaggatcacgtgggttacctggagtggaaggatccagagggccccctggacca
cgaggtatgcaaggtgaacgaggtgcgacaggtcttcctggcatccagggcccagcgggt
agagcaccaactgatcagcatattaaacaggtttgcctaagagttatgcaagagaatcta
gccctcatggctgctagcctgaggaggcctgactcaggtgcttctgggctaccaggaaga
cctggaccaccaggtccacctgggcccccaggagagaatggttttccaggccagattgga
ccccgtggactccctggtcttaaaggtcctcctggtgaacttggtttgagaggccctaaa
ggtgacttgggtgaaaggggtgagagaggacctcctggaagaggacccaaaggcttgcca
ggatcaattggtctcccaggtgatccaggtccagcaagctatgggaaagaaggacgggat
ggagaacgaggccctccaggtcctgcaggaattcctggagtccctggtccccctggccct
gctggtccccctggtttctgtgagccagcctcctgtacggtacaggctggccagcgtgct
ttcagcaaagggccagatcagtga

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